RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 FOXL1Q12952 345 aa7.97□□□□□ -1.13
PHC1-208ENST00000540574 LY6EQ16553 131 aa7.97□□□□□ -1.13
PHC1-208ENST00000540574 WFDC3Q8IUB2 231 aa7.97□□□□□ -1.13
PHC1-208ENST00000540574 STXBP6Q8NFX7 210 aa7.97□□□□□ -1.13
PHC1-208ENST00000540574 DDB2Q92466 427 aa7.97□□□□□ -1.13
PHC1-208ENST00000540574 NDUFA4L2Q9NRX3 87 aa7.97□□□□□ -1.13
PHC1-208ENST00000540574 DMRTA1Q5VZB9 504 aa7.97□□□□□ -1.13
PHC1-208ENST00000540574 ZNF600Q6ZNG1 722 aa7.97□□□□□ -1.13
PHC1-208ENST00000540574 FA2HQ7L5A8 372 aa7.97□□□□□ -1.13
PHC1-208ENST00000540574 CENPVQ7Z7K6 275 aaPredicted RBP7.97□□□□□ -1.13
PHC1-208ENST00000540574 OR8A1Q8NGG7 326 aa7.97□□□□□ -1.13
PHC1-208ENST00000540574 MRPL32Q9BYC8 188 aaKnown RBP7.97□□□□□ -1.13
PHC1-208ENST00000540574 EPDR1Q9UM22 224 aa7.97□□□□□ -1.13
PHC1-208ENST00000540574 A0A1W2PRE2 83 aa7.96□□□□□ -1.13
PHC1-208ENST00000540574 TMPRSS3P57727 454 aa7.96□□□□□ -1.13
PHC1-208ENST00000540574 TDRG1Q3Y452 100 aa7.96□□□□□ -1.13
PHC1-208ENST00000540574 UNQ5815/PRO19632Q6UWF5 114 aa7.96□□□□□ -1.13
PHC1-208ENST00000540574 C5orf17Q8NAS9 161 aa7.96□□□□□ -1.13
PHC1-208ENST00000540574 OR4A5Q8NH83 315 aa7.96□□□□□ -1.13
PHC1-208ENST00000540574 TMEM167AQ8TBQ9 72 aa7.96□□□□□ -1.13
PHC1-208ENST00000540574 CHRDL1Q9BU40 450 aa7.96□□□□□ -1.13
PHC1-208ENST00000540574 LSM4Q9Y4Z0 139 aaKnown RBP7.96□□□□□ -1.13
PHC1-208ENST00000540574 PPIFP30405 207 aaKnown RBP7.96□□□□□ -1.14
PHC1-208ENST00000540574 SIGLEC9Q9Y336 463 aa7.96□□□□□ -1.14
PHC1-208ENST00000540574 C20orf202A1L168 122 aa7.96□□□□□ -1.14
PHC1-208ENST00000540574 PAFAH1B2P68402 229 aa7.96□□□□□ -1.14
PHC1-208ENST00000540574 PRR20EP86478 221 aa7.96□□□□□ -1.14
PHC1-208ENST00000540574 PRR20CP86479 221 aa7.96□□□□□ -1.14
PHC1-208ENST00000540574 PRR20DP86480 221 aa7.96□□□□□ -1.14
PHC1-208ENST00000540574 PRR20BP86481 221 aa7.96□□□□□ -1.14
PHC1-208ENST00000540574 PRR20AP86496 221 aa7.96□□□□□ -1.14
PHC1-208ENST00000540574 NUP37Q8NFH4 326 aa7.96□□□□□ -1.14
PHC1-208ENST00000540574 RNASEH2CQ8TDP1 164 aaKnown RBP7.96□□□□□ -1.14
PHC1-208ENST00000540574 CDC42EP3Q9UKI2 254 aa7.96□□□□□ -1.14
PHC1-208ENST00000540574 GPR183P32249 361 aa7.95□□□□□ -1.14
PHC1-208ENST00000540574 LINC00469Q8N7U9 141 aa7.95□□□□□ -1.14
PHC1-208ENST00000540574 FAM169BQ8N8A8 192 aa7.95□□□□□ -1.14
PHC1-208ENST00000540574 OR5AN1Q8NGI8 311 aa7.95□□□□□ -1.14
PHC1-208ENST00000540574 EREGO14944 169 aa7.95□□□□□ -1.14
PHC1-208ENST00000540574 MT-ND6P03923 174 aa7.95□□□□□ -1.14
PHC1-208ENST00000540574 EIF4EBP1Q13541 118 aaPredicted RBP7.95□□□□□ -1.14
PHC1-208ENST00000540574 VWC2Q2TAL6 325 aa7.95□□□□□ -1.14
PHC1-208ENST00000540574 THYN1Q9P016 225 aa7.95□□□□□ -1.14
PHC1-208ENST00000540574 BUB1B-PAK6H3BSN5 160 aa7.95□□□□□ -1.14
PHC1-208ENST00000540574 CD99P14209 185 aa7.95□□□□□ -1.14
PHC1-208ENST00000540574 RPL15P61313 204 aaKnown RBP7.95□□□□□ -1.14
PHC1-208ENST00000540574 GPR82Q96P67 336 aa7.95□□□□□ -1.14
PHC1-208ENST00000540574 RCHY1Q96PM5 261 aa7.95□□□□□ -1.14
PHC1-208ENST00000540574 VKORC1Q9BQB6 163 aa7.95□□□□□ -1.14
PHC1-208ENST00000540574 C19orf24Q9BVV8 132 aa7.95□□□□□ -1.14
PHC1-208ENST00000540574 OR5AL1P0C617 328 aa7.94□□□□□ -1.14
PHC1-208ENST00000540574 TMEM155Q4W5P6 130 aa7.94□□□□□ -1.14
PHC1-208ENST00000540574 TMEM219Q86XT9 240 aa7.94□□□□□ -1.14
PHC1-208ENST00000540574 Q8NA96 180 aa7.94□□□□□ -1.14
PHC1-208ENST00000540574 NUP35Q8NFH5 326 aa7.94□□□□□ -1.14
PHC1-208ENST00000540574 C17orf77Q96MU5 243 aa7.94□□□□□ -1.14
PHC1-208ENST00000540574 SLC25A2Q9BXI2 301 aa7.94□□□□□ -1.14
PHC1-208ENST00000540574 UFC1Q9Y3C8 167 aa7.94□□□□□ -1.14
PHC1-208ENST00000540574 CEACAM4O75871 244 aa7.94□□□□□ -1.14
PHC1-208ENST00000540574 ZNF833PQ6ZTB9 187 aa7.94□□□□□ -1.14
PHC1-208ENST00000540574 C11orf42Q8N5U0 333 aa7.94□□□□□ -1.14
PHC1-208ENST00000540574 V9GYV3 84 aa7.94□□□□□ -1.14
PHC1-208ENST00000540574 SLAQ13239 276 aa7.94□□□□□ -1.14
PHC1-208ENST00000540574 YPEL4Q96NS1 127 aa7.94□□□□□ -1.14
PHC1-208ENST00000540574 NDUFAF3Q9BU61 184 aa7.94□□□□□ -1.14
PHC1-208ENST00000540574 OSTCQ9NRP0 149 aa7.94□□□□□ -1.14
PHC1-208ENST00000540574 SHISA9B4DS77 424 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 NHLH1Q02575 133 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 TEX36Q5VZQ5 186 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 DMRTC2Q8IXT2 367 aaPredicted RBP7.93□□□□□ -1.14
PHC1-208ENST00000540574 TEX45Q8NA69 505 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 Q8TAT8 98 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 AP1S3Q96PC3 154 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 IZUMO1RA6ND01 250 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 NBR2O15453 112 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 VAMP3Q15836 100 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 S100A7AQ86SG5 101 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 DEFB104AQ8WTQ1 72 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 KCNS1Q96KK3 526 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 EPG5Q9HCE0 2579 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.93□□□□□ -1.14
PHC1-208ENST00000540574 LEPROTL1O95214 131 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 CGB3P0DN86 165 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 CGB7P0DN87 165 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 MFAP4P55083 255 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 PATE2Q6UY27 113 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 Q6ZWC4 215 aa7.93□□□□□ -1.14
PHC1-208ENST00000540574 SLC25A39Q9BZJ4 359 aaPredicted RBP7.93□□□□□ -1.14
PHC1-208ENST00000540574 POLR3KQ9Y2Y1 108 aaPredicted RBP7.93□□□□□ -1.14
PHC1-208ENST00000540574 C22orf46C9J442 243 aa7.92□□□□□ -1.14
PHC1-208ENST00000540574 C9JCJ5 164 aa7.92□□□□□ -1.14
PHC1-208ENST00000540574 HBBP68871 147 aa7.92□□□□□ -1.14
PHC1-208ENST00000540574 CX3CL1P78423 397 aa7.92□□□□□ -1.14
PHC1-208ENST00000540574 TWIST1Q15672 202 aa7.92□□□□□ -1.14
PHC1-208ENST00000540574 KLHDC1Q8N7A1 406 aa7.92□□□□□ -1.14
PHC1-208ENST00000540574 RNF125Q96EQ8 232 aa7.92□□□□□ -1.14
PHC1-208ENST00000540574 NDFIP1Q9BT67 221 aa7.92□□□□□ -1.14
PHC1-208ENST00000540574 SMG1Q96Q15 3661 aaKnown RBP7.92□□□□□ -1.14
PHC1-208ENST00000540574 RELQ04864 619 aaPredicted RBP7.92□□□□□ -1.14
PHC1-208ENST00000540574 KLRB1Q12918 225 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms