RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 K7EPK0 472 aa6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 SSSCA1O60232 199 aa6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 PRAF2O60831 178 aa6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 SCAF4O95104 1147 aaKnown RBP6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 SCGB1D2O95969 90 aa6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 CD7P09564 240 aa6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 OR10J1P30954 320 aa6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 RPP30P78346 268 aaKnown RBP6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 ARL16Q0P5N6 197 aa6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 FAM90A2PQ658T7 463 aa6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 TMEM14EPQ6UXP3 125 aa6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 OR1S2Q8NGQ3 325 aa6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 Q8WTZ3 238 aa6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 RAB40CQ96S21 281 aa6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 RNF2Q99496 336 aa6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 GPN1Q9HCN4 374 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 SCRT2Q9NQ03 307 aa6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 PAIP2BQ9ULR5 123 aaKnown RBP6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 STRAPQ9Y3F4 350 aaKnown RBP6.52□□□□□ -1.37
TRAPPC1-202ENST00000540486 TRAV25A0A0B4J276 109 aa6.51□□□□□ -1.37
TRAPPC1-202ENST00000540486 SPRY2O43597 315 aa6.51□□□□□ -1.37
TRAPPC1-202ENST00000540486 TOMM40O96008 361 aa6.51□□□□□ -1.37
TRAPPC1-202ENST00000540486 PSG1P11464 419 aa6.51□□□□□ -1.37
TRAPPC1-202ENST00000540486 TAS2R30P59541 319 aa6.51□□□□□ -1.37
TRAPPC1-202ENST00000540486 ZNF90Q03938 601 aa6.51□□□□□ -1.37
TRAPPC1-202ENST00000540486 RAB32Q13637 225 aa6.51□□□□□ -1.37
TRAPPC1-202ENST00000540486 USF2Q15853 346 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC1-202ENST00000540486 GUCA2BQ16661 112 aa6.51□□□□□ -1.37
TRAPPC1-202ENST00000540486 GSG1LQ6UXU4 331 aa6.51□□□□□ -1.37
TRAPPC1-202ENST00000540486 TMEM182Q6ZP80 229 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC1-202ENST00000540486 Q6ZWC4 215 aa6.51□□□□□ -1.37
TRAPPC1-202ENST00000540486 C2CD4CQ8TF44 421 aa6.51□□□□□ -1.37
TRAPPC1-202ENST00000540486 ST8SIA2Q92186 375 aa6.51□□□□□ -1.37
TRAPPC1-202ENST00000540486 GGTLC1Q9BX51 225 aa6.51□□□□□ -1.37
TRAPPC1-202ENST00000540486 VSIRQ9H7M9 311 aa6.51□□□□□ -1.37
TRAPPC1-202ENST00000540486 LSM5Q9Y4Y9 91 aaKnown RBP6.51□□□□□ -1.37
TRAPPC1-202ENST00000540486 LOC102724200A0A096LPH7 203 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC1-202ENST00000540486 IGHV3-66A0A0C4DH42 116 aa6.5□□□□□ -1.37
TRAPPC1-202ENST00000540486 FAM24AA6NFZ4 105 aa6.5□□□□□ -1.37
TRAPPC1-202ENST00000540486 GOSR2O14653 212 aa6.5□□□□□ -1.37
TRAPPC1-202ENST00000540486 TSPAN4O14817 238 aa6.5□□□□□ -1.37
TRAPPC1-202ENST00000540486 TSC22D2O75157 780 aa6.5□□□□□ -1.37
TRAPPC1-202ENST00000540486 DFFBO76075 338 aa6.5□□□□□ -1.37
TRAPPC1-202ENST00000540486 METTL15P1P0C7V9 234 aa6.5□□□□□ -1.37
TRAPPC1-202ENST00000540486 RD3LP0DJH9 198 aa6.5□□□□□ -1.37
TRAPPC1-202ENST00000540486 NPPCP23582 126 aa6.5□□□□□ -1.37
TRAPPC1-202ENST00000540486 CRYBB3P26998 211 aa6.5□□□□□ -1.37
TRAPPC1-202ENST00000540486 KIR3DS1Q14943 382 aa6.5□□□□□ -1.37
TRAPPC1-202ENST00000540486 RBPMS2Q6ZRY4 209 aaKnown RBP6.5□□□□□ -1.37
TRAPPC1-202ENST00000540486 STPG3Q8N7X2 389 aa6.5□□□□□ -1.37
TRAPPC1-202ENST00000540486 THAP8Q8NA92 274 aa6.5□□□□□ -1.37
TRAPPC1-202ENST00000540486 GINS3Q9BRX5 216 aa6.5□□□□□ -1.37
TRAPPC1-202ENST00000540486 MFFQ9GZY8 342 aa6.5□□□□□ -1.37
TRAPPC1-202ENST00000540486 ZFP92A6NM28 416 aa6.49□□□□□ -1.37
TRAPPC1-202ENST00000540486 H0YIZ8 118 aa6.49□□□□□ -1.37
TRAPPC1-202ENST00000540486 PTTG1O95997 202 aa6.49□□□□□ -1.37
TRAPPC1-202ENST00000540486 IL4P05112 153 aa6.49□□□□□ -1.37
TRAPPC1-202ENST00000540486 GATA2P23769 480 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC1-202ENST00000540486 H2BFSP57053 126 aa6.49□□□□□ -1.37
TRAPPC1-202ENST00000540486 LAMTOR1Q6IAA8 161 aa6.49□□□□□ -1.37
TRAPPC1-202ENST00000540486 OR8G2PQ6IF36 304 aa6.49□□□□□ -1.37
TRAPPC1-202ENST00000540486 ACOT7LQ6ZUV0 252 aa6.49□□□□□ -1.37
TRAPPC1-202ENST00000540486 TMEM144Q7Z5S9 345 aa6.49□□□□□ -1.37
TRAPPC1-202ENST00000540486 OR10P1Q8NGE3 313 aa6.49□□□□□ -1.37
TRAPPC1-202ENST00000540486 OR51G1Q8NGK1 321 aa6.49□□□□□ -1.37
TRAPPC1-202ENST00000540486 SLC35E1Q96K37 410 aa6.49□□□□□ -1.37
TRAPPC1-202ENST00000540486 TRGV9Q99603 122 aa6.49□□□□□ -1.37
TRAPPC1-202ENST00000540486 WFDC10AQ9H1F0 79 aa6.49□□□□□ -1.37
TRAPPC1-202ENST00000540486 APLNQ9ULZ1 77 aa6.49□□□□□ -1.37
TRAPPC1-202ENST00000540486 IGKV3-7A0A075B6H7 116 aa6.48□□□□□ -1.37
TRAPPC1-202ENST00000540486 BUB3O43684 328 aa6.48□□□□□ -1.37
TRAPPC1-202ENST00000540486 SCGB2A1O75556 95 aa6.48□□□□□ -1.37
TRAPPC1-202ENST00000540486 RRAS2P62070 204 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC1-202ENST00000540486 DLK1P80370 383 aa6.48□□□□□ -1.37
TRAPPC1-202ENST00000540486 OR2F1Q13607 317 aa6.48□□□□□ -1.37
TRAPPC1-202ENST00000540486 C16orf54Q6UWD8 224 aa6.48□□□□□ -1.37
TRAPPC1-202ENST00000540486 TCF24Q7RTU0 167 aa6.48□□□□□ -1.37
TRAPPC1-202ENST00000540486 GBGT1Q8N5D6 347 aa6.48□□□□□ -1.37
TRAPPC1-202ENST00000540486 TMEM252Q8N6L7 170 aa6.48□□□□□ -1.37
TRAPPC1-202ENST00000540486 METTL26Q96S19 204 aa6.48□□□□□ -1.37
TRAPPC1-202ENST00000540486 SPAG8Q99932 426 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC1-202ENST00000540486 RNF126Q9BV68 326 aa6.48□□□□□ -1.37
TRAPPC1-202ENST00000540486 KRTAP9-2Q9BYQ4 174 aa6.48□□□□□ -1.37
TRAPPC1-202ENST00000540486 NMES1Q9C002 83 aa6.48□□□□□ -1.37
TRAPPC1-202ENST00000540486 NPVFQ9HCQ7 196 aa6.48□□□□□ -1.37
TRAPPC1-202ENST00000540486 ALG5Q9Y673 324 aa6.48□□□□□ -1.37
TRAPPC1-202ENST00000540486 A0A1W2PS18 150 aa6.47□□□□□ -1.37
TRAPPC1-202ENST00000540486 IGSF23A1L1A6 192 aa6.47□□□□□ -1.37
TRAPPC1-202ENST00000540486 C16orf90A8MZG2 172 aa6.47□□□□□ -1.37
TRAPPC1-202ENST00000540486 FNDC10F2Z333 226 aa6.47□□□□□ -1.37
TRAPPC1-202ENST00000540486 L7N2F9 121 aa6.47□□□□□ -1.37
TRAPPC1-202ENST00000540486 UBE2CO00762 179 aa6.47□□□□□ -1.37
TRAPPC1-202ENST00000540486 SSNA1O43805 119 aa6.47□□□□□ -1.37
TRAPPC1-202ENST00000540486 CST7O76096 145 aa6.47□□□□□ -1.37
TRAPPC1-202ENST00000540486 HNRNPCP07910 306 aaKnown RBP eCLIP6.47□□□□□ -1.37
TRAPPC1-202ENST00000540486 CXCL3P19876 107 aa6.47□□□□□ -1.37
TRAPPC1-202ENST00000540486 TFPI2P48307 235 aa6.47□□□□□ -1.37
TRAPPC1-202ENST00000540486 BCAP31P51572 246 aa6.47□□□□□ -1.37
TRAPPC1-202ENST00000540486 S100A10P60903 97 aa6.47□□□□□ -1.37
TRAPPC1-202ENST00000540486 VAMP2P63027 116 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms