RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 NEGR1Q7Z3B1 354 aa9.04□□□□□ -0.96
PBX1-212ENST00000540236 LINC00596Q86U02 117 aa9.04□□□□□ -0.96
PBX1-212ENST00000540236 ZNF295-AS1Q8N0V1 137 aa9.04□□□□□ -0.96
PBX1-212ENST00000540236 RPRMLQ8N4K4 120 aa9.04□□□□□ -0.96
PBX1-212ENST00000540236 ZNRF1Q8ND25 227 aa9.04□□□□□ -0.96
PBX1-212ENST00000540236 PPDPFLQ8WWR9 84 aa9.04□□□□□ -0.96
PBX1-212ENST00000540236 LINC01565O15544 149 aa9.03□□□□□ -0.96
PBX1-212ENST00000540236 DLX6P56179 175 aa9.03□□□□□ -0.96
PBX1-212ENST00000540236 RAC3P60763 192 aa9.03□□□□□ -0.96
PBX1-212ENST00000540236 Q8IYB0 196 aa9.03□□□□□ -0.96
PBX1-212ENST00000540236 ZNRD1Q9P1U0 126 aa9.03□□□□□ -0.96
PBX1-212ENST00000540236 METRNQ9UJH8 293 aa9.03□□□□□ -0.96
PBX1-212ENST00000540236 CENPVQ7Z7K6 275 aaPredicted RBP9.03□□□□□ -0.96
PBX1-212ENST00000540236 SIGLEC8Q9NYZ4 499 aa9.03□□□□□ -0.96
PBX1-212ENST00000540236 WDR90Q96KV7 1748 aa9.03□□□□□ -0.96
PBX1-212ENST00000540236 IGHV3OR16-13A0A075B7E8 117 aa9.03□□□□□ -0.96
PBX1-212ENST00000540236 IGHV3-74A0A0B4J1X5 117 aa9.03□□□□□ -0.96
PBX1-212ENST00000540236 NXT2Q9NPJ8 142 aaKnown RBP9.03□□□□□ -0.96
PBX1-212ENST00000540236 IGKV3-11P04433 115 aa9.03□□□□□ -0.96
PBX1-212ENST00000540236 ATP5L2Q7Z4Y8 100 aa9.03□□□□□ -0.96
PBX1-212ENST00000540236 IFI27L2Q9H2X8 130 aa9.03□□□□□ -0.96
PBX1-212ENST00000540236 TRAV13-1A0A0B4J241 112 aa9.02□□□□□ -0.96
PBX1-212ENST00000540236 SPTY2D1-AS1A0A0U1RR47 76 aa9.02□□□□□ -0.96
PBX1-212ENST00000540236 KLF5Q13887 457 aaPredicted RBP9.02□□□□□ -0.96
PBX1-212ENST00000540236 ZNF497Q6ZNH5 498 aa9.02□□□□□ -0.96
PBX1-212ENST00000540236 C2orf91Q6ZV80 131 aa9.02□□□□□ -0.96
PBX1-212ENST00000540236 TNFRSF4P43489 277 aa9.02□□□□□ -0.97
PBX1-212ENST00000540236 C8orf46Q8TAG6 207 aa9.02□□□□□ -0.97
PBX1-212ENST00000540236 ZNF714Q96N38 554 aa9.02□□□□□ -0.97
PBX1-212ENST00000540236 CITED2Q99967 270 aaPredicted RBP9.02□□□□□ -0.97
PBX1-212ENST00000540236 SDK1Q7Z5N4 2213 aa9.02□□□□□ -0.97
PBX1-212ENST00000540236 GTF3C1Q12789 2109 aa9.02□□□□□ -0.97
PBX1-212ENST00000540236 PRDX2P32119 198 aa9.02□□□□□ -0.97
PBX1-212ENST00000540236 MORN5Q5VZ52 161 aa9.02□□□□□ -0.97
PBX1-212ENST00000540236 Q6ZS52 159 aa9.02□□□□□ -0.97
PBX1-212ENST00000540236 ANKRD29Q8N6D5 301 aa9.02□□□□□ -0.97
PBX1-212ENST00000540236 ZNF747Q9BV97 191 aa9.02□□□□□ -0.97
PBX1-212ENST00000540236 COL4A6Q14031 1691 aa9.02□□□□□ -0.97
PBX1-212ENST00000540236 LRRK1Q38SD2 2015 aa9.02□□□□□ -0.97
PBX1-212ENST00000540236 XGP55808 180 aa9.02□□□□□ -0.97
PBX1-212ENST00000540236 LYPD6Q86Y78 171 aa9.02□□□□□ -0.97
PBX1-212ENST00000540236 IGKV3D-20A0A0C4DH25 116 aa9.01□□□□□ -0.97
PBX1-212ENST00000540236 LIFP15018 202 aa9.01□□□□□ -0.97
PBX1-212ENST00000540236 CALYQ9NYX4 217 aa9.01□□□□□ -0.97
PBX1-212ENST00000540236 Q6ZPA2 131 aa9.01□□□□□ -0.97
PBX1-212ENST00000540236 MED12Q93074 2177 aa9.01□□□□□ -0.97
PBX1-212ENST00000540236 IGKV2-40A0A087WW87 121 aaPredicted RBP9.01□□□□□ -0.97
PBX1-212ENST00000540236 C2CD4DB7Z1M9 353 aa9.01□□□□□ -0.97
PBX1-212ENST00000540236 IGKV2D-40P01614 121 aaPredicted RBP9.01□□□□□ -0.97
PBX1-212ENST00000540236 OR13C6PQ8NH95 151 aa9.01□□□□□ -0.97
PBX1-212ENST00000540236 TRPT1Q86TN4 253 aaKnown RBP9.01□□□□□ -0.97
PBX1-212ENST00000540236 MRPL32Q9BYC8 188 aaKnown RBP9.01□□□□□ -0.97
PBX1-212ENST00000540236 FOXG1P55316 489 aaPredicted RBP9.01□□□□□ -0.97
PBX1-212ENST00000540236 IGLV3-21P80748 117 aaPredicted RBP9.01□□□□□ -0.97
PBX1-212ENST00000540236 ODF1Q14990 250 aa9.01□□□□□ -0.97
PBX1-212ENST00000540236 PKIBQ9C010 78 aa9.01□□□□□ -0.97
PBX1-212ENST00000540236 FABP5P3A8MUU1 101 aa9□□□□□ -0.97
PBX1-212ENST00000540236 NDUFS7O75251 213 aa9□□□□□ -0.97
PBX1-212ENST00000540236 TMEM78Q5T7P6 136 aa9□□□□□ -0.97
PBX1-212ENST00000540236 A0A1W2PPC4 97 aa9□□□□□ -0.97
PBX1-212ENST00000540236 FKBP2P26885 142 aaKnown RBP9□□□□□ -0.97
PBX1-212ENST00000540236 C10orf55Q5SWW7 151 aa9□□□□□ -0.97
PBX1-212ENST00000540236 C1orf43Q9BWL3 253 aa9□□□□□ -0.97
PBX1-212ENST00000540236 GCSAMQ8N6F7 178 aa9□□□□□ -0.97
PBX1-212ENST00000540236 DDB2Q92466 427 aa9□□□□□ -0.97
PBX1-212ENST00000540236 ZNF146Q15072 292 aa9□□□□□ -0.97
PBX1-212ENST00000540236 C2orf82Q6UX34 121 aa9□□□□□ -0.97
PBX1-212ENST00000540236 NTN5Q8WTR8 489 aaPredicted RBP9□□□□□ -0.97
PBX1-212ENST00000540236 TRAV8-3A0A0A6YYJ7 113 aa9□□□□□ -0.97
PBX1-212ENST00000540236 A0A0U1RRA0 63 aa9□□□□□ -0.97
PBX1-212ENST00000540236 FAM90A10PA6NDY2 464 aa9□□□□□ -0.97
PBX1-212ENST00000540236 FAM90A18PA6NE21 464 aa9□□□□□ -0.97
PBX1-212ENST00000540236 FAM90A16PA6NEW6 464 aa9□□□□□ -0.97
PBX1-212ENST00000540236 FAM90A20PA6NIJ5 464 aa9□□□□□ -0.97
PBX1-212ENST00000540236 FAM90A8PA6NJQ4 464 aa9□□□□□ -0.97
PBX1-212ENST00000540236 FAM90A7PA6NKC0 464 aa9□□□□□ -0.97
PBX1-212ENST00000540236 FAM90A22PA8MWA6 464 aa9□□□□□ -0.97
PBX1-212ENST00000540236 FAM90A12PA8MX19 464 aa9□□□□□ -0.97
PBX1-212ENST00000540236 FAM90A5PA8MXJ8 464 aa9□□□□□ -0.97
PBX1-212ENST00000540236 FAM90A23PA8MXZ1 464 aa9□□□□□ -0.97
PBX1-212ENST00000540236 FAM90A15PP0C7V4 464 aa9□□□□□ -0.97
PBX1-212ENST00000540236 FAM90A13PP0C7W8 464 aa9□□□□□ -0.97
PBX1-212ENST00000540236 FAM90A14PP0C7W9 464 aa9□□□□□ -0.97
PBX1-212ENST00000540236 FAM90A24PP0C7X0 464 aa9□□□□□ -0.97
PBX1-212ENST00000540236 PCOLCEQ15113 449 aa9□□□□□ -0.97
PBX1-212ENST00000540236 LPAL2Q16609 132 aa9□□□□□ -0.97
PBX1-212ENST00000540236 PRB1P04280 392 aa8.99□□□□□ -0.97
PBX1-212ENST00000540236 CXXC4Q9H2H0 198 aa8.99□□□□□ -0.97
PBX1-212ENST00000540236 COX7A1P24310 79 aa8.99□□□□□ -0.97
PBX1-212ENST00000540236 CCL7P80098 99 aa8.99□□□□□ -0.97
PBX1-212ENST00000540236 LILRA6Q6PI73 481 aa8.99□□□□□ -0.97
PBX1-212ENST00000540236 NPIPB13A6NJU9 1138 aa8.99□□□□□ -0.97
PBX1-212ENST00000540236 NPIPB4C9JG80 1138 aa8.99□□□□□ -0.97
PBX1-212ENST00000540236 NDUFV3P56181 108 aaKnown RBP8.99□□□□□ -0.97
PBX1-212ENST00000540236 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.99□□□□□ -0.97
PBX1-212ENST00000540236 Q8TAT8 98 aa8.99□□□□□ -0.97
PBX1-212ENST00000540236 ABCA7Q8IZY2 2146 aa8.99□□□□□ -0.97
PBX1-212ENST00000540236 UNC13CQ8NB66 2214 aa8.99□□□□□ -0.97
PBX1-212ENST00000540236 ADIPOQQ15848 244 aa8.99□□□□□ -0.97
PBX1-212ENST00000540236 RAB1CQ92928 201 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms