RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 IL5P05113 134 aa8.18□□□□□ -1.1
CLSTN3-209ENST00000539982 BCAP31P51572 246 aa8.18□□□□□ -1.1
CLSTN3-209ENST00000539982 UCP3P55916 312 aa8.18□□□□□ -1.1
CLSTN3-209ENST00000539982 YPEL3P61236 119 aaPredicted RBP8.18□□□□□ -1.1
CLSTN3-209ENST00000539982 DAD1P61803 113 aa8.18□□□□□ -1.1
CLSTN3-209ENST00000539982 GDF5OSQ5U4N7 250 aa8.18□□□□□ -1.1
CLSTN3-209ENST00000539982 TMED4Q7Z7H5 227 aa8.18□□□□□ -1.1
CLSTN3-209ENST00000539982 ZFAND1Q8TCF1 268 aa8.18□□□□□ -1.1
CLSTN3-209ENST00000539982 GPN1Q9HCN4 374 aaPredicted RBP8.18□□□□□ -1.1
CLSTN3-209ENST00000539982 GPR132Q9UNW8 380 aa8.18□□□□□ -1.1
CLSTN3-209ENST00000539982 GOLT1BQ9Y3E0 138 aa8.18□□□□□ -1.1
CLSTN3-209ENST00000539982 ALG5Q9Y673 324 aa8.18□□□□□ -1.1
CLSTN3-209ENST00000539982 LOC102723971A0A1B0GUV8 181 aa8.17□□□□□ -1.1
CLSTN3-209ENST00000539982 C7orf66A4D0T2 115 aa8.17□□□□□ -1.1
CLSTN3-209ENST00000539982 EPM2AB3EWF7 344 aa8.17□□□□□ -1.1
CLSTN3-209ENST00000539982 BUB3O43684 328 aa8.17□□□□□ -1.1
CLSTN3-209ENST00000539982 IGLC1P0CG04 106 aa8.17□□□□□ -1.1
CLSTN3-209ENST00000539982 DHODHQ02127 395 aa8.17□□□□□ -1.1
CLSTN3-209ENST00000539982 SIGLEC15Q6ZMC9 328 aa8.17□□□□□ -1.1
CLSTN3-209ENST00000539982 C1orf158Q8N1D5 194 aa8.17□□□□□ -1.1
CLSTN3-209ENST00000539982 ZNF709Q8N972 641 aa8.17□□□□□ -1.1
CLSTN3-209ENST00000539982 OR1S2Q8NGQ3 325 aa8.17□□□□□ -1.1
CLSTN3-209ENST00000539982 PDCD10Q9BUL8 212 aa8.17□□□□□ -1.1
CLSTN3-209ENST00000539982 SAV1Q9H4B6 383 aaPredicted RBP8.17□□□□□ -1.1
CLSTN3-209ENST00000539982 ENY2Q9NPA8 101 aa8.17□□□□□ -1.1
CLSTN3-209ENST00000539982 C14orf166Q9Y224 244 aaKnown RBP8.17□□□□□ -1.1
CLSTN3-209ENST00000539982 RPS10-NUDT3A0A1W2PQS6 291 aa8.16□□□□□ -1.1
CLSTN3-209ENST00000539982 SNRPGP15A8MWD9 76 aa8.16□□□□□ -1.1
CLSTN3-209ENST00000539982 IGKV1-5P01602 117 aa8.16□□□□□ -1.1
CLSTN3-209ENST00000539982 OR4E1P0C645 316 aa8.16□□□□□ -1.1
CLSTN3-209ENST00000539982 P0C879 139 aa8.16□□□□□ -1.1
CLSTN3-209ENST00000539982 INAFM2P0DMQ5 153 aa8.16□□□□□ -1.1
CLSTN3-209ENST00000539982 CCL18P55774 89 aa8.16□□□□□ -1.1
CLSTN3-209ENST00000539982 DEFB1P60022 68 aa8.16□□□□□ -1.1
CLSTN3-209ENST00000539982 UBE2MP61081 183 aaKnown RBP8.16□□□□□ -1.1
CLSTN3-209ENST00000539982 USF2Q15853 346 aaPredicted RBP8.16□□□□□ -1.1
CLSTN3-209ENST00000539982 RRN3P1Q2M238 152 aa8.16□□□□□ -1.1
CLSTN3-209ENST00000539982 BSXQ3C1V8 233 aa8.16□□□□□ -1.1
CLSTN3-209ENST00000539982 C4orf46Q504U0 113 aa8.16□□□□□ -1.1
CLSTN3-209ENST00000539982 FOXI2Q6ZQN5 318 aa8.16□□□□□ -1.1
CLSTN3-209ENST00000539982 OR4B1Q8NGF8 309 aa8.16□□□□□ -1.1
CLSTN3-209ENST00000539982 LINC00052Q96N35 136 aa8.16□□□□□ -1.1
CLSTN3-209ENST00000539982 RTBDNQ9BSG5 229 aaPredicted RBP8.16□□□□□ -1.1
CLSTN3-209ENST00000539982 SLC35B3Q9H1N7 401 aa8.16□□□□□ -1.1
CLSTN3-209ENST00000539982 IL4P05112 153 aa8.15□□□□□ -1.1
CLSTN3-209ENST00000539982 AKR1C4P17516 323 aa8.15□□□□□ -1.1
CLSTN3-209ENST00000539982 PI3P19957 117 aa8.15□□□□□ -1.1
CLSTN3-209ENST00000539982 OR10J1P30954 320 aa8.15□□□□□ -1.1
CLSTN3-209ENST00000539982 KRTAP10-2P60368 255 aa8.15□□□□□ -1.1
CLSTN3-209ENST00000539982 PSG9Q00887 426 aa8.15□□□□□ -1.1
CLSTN3-209ENST00000539982 TMEM128Q5BJH2 165 aa8.15□□□□□ -1.1
CLSTN3-209ENST00000539982 SPATA31B1PQ5VZV4 182 aa8.15□□□□□ -1.1
CLSTN3-209ENST00000539982 PRSS54Q6PEW0 395 aa8.15□□□□□ -1.1
CLSTN3-209ENST00000539982 ZNF431Q8TF32 576 aaPredicted RBP8.15□□□□□ -1.1
CLSTN3-209ENST00000539982 CHAC2Q8WUX2 184 aa8.15□□□□□ -1.1
CLSTN3-209ENST00000539982 ZNF486Q96H40 463 aaPredicted RBP8.15□□□□□ -1.1
CLSTN3-209ENST00000539982 SEC22CQ9BRL7 303 aa8.15□□□□□ -1.1
CLSTN3-209ENST00000539982 LINC00588Q9Y4M8 146 aa8.15□□□□□ -1.1
CLSTN3-209ENST00000539982 PFDN1O60925 122 aa8.14□□□□□ -1.11
CLSTN3-209ENST00000539982 ATG12O94817 140 aa8.14□□□□□ -1.11
CLSTN3-209ENST00000539982 NUDT3O95989 172 aa8.14□□□□□ -1.11
CLSTN3-209ENST00000539982 RD3LP0DJH9 198 aa8.14□□□□□ -1.11
CLSTN3-209ENST00000539982 SLC25A4P12235 298 aa8.14□□□□□ -1.11
CLSTN3-209ENST00000539982 ID1P41134 155 aa8.14□□□□□ -1.11
CLSTN3-209ENST00000539982 HTR2BP41595 481 aa8.14□□□□□ -1.11
CLSTN3-209ENST00000539982 RND2P52198 227 aa8.14□□□□□ -1.11
CLSTN3-209ENST00000539982 PIGPP57054 158 aa8.14□□□□□ -1.11
CLSTN3-209ENST00000539982 RRAS2P62070 204 aaPredicted RBP8.14□□□□□ -1.11
CLSTN3-209ENST00000539982 PPP1R1AQ13522 171 aa8.14□□□□□ -1.11
CLSTN3-209ENST00000539982 CCDC71LQ8N9Z2 235 aa8.14□□□□□ -1.11
CLSTN3-209ENST00000539982 MAGT1Q9H0U3 335 aa8.14□□□□□ -1.11
CLSTN3-209ENST00000539982 MED28Q9H204 178 aa8.14□□□□□ -1.11
CLSTN3-209ENST00000539982 TEX13DA0A0J9YY54 714 aaPredicted RBP8.13□□□□□ -1.11
CLSTN3-209ENST00000539982 C9orf170A2RU37 121 aa8.13□□□□□ -1.11
CLSTN3-209ENST00000539982 CRYM-AS1A6NIL9 109 aa8.13□□□□□ -1.11
CLSTN3-209ENST00000539982 LYRM9A8MSI8 78 aa8.13□□□□□ -1.11
CLSTN3-209ENST00000539982 SSNA1O43805 119 aa8.13□□□□□ -1.11
CLSTN3-209ENST00000539982 SFT2D2O95562 160 aa8.13□□□□□ -1.11
CLSTN3-209ENST00000539982 BTF3P20290 206 aaKnown RBP8.13□□□□□ -1.11
CLSTN3-209ENST00000539982 VAMP1P23763 118 aa8.13□□□□□ -1.11
CLSTN3-209ENST00000539982 AKR1C2P52895 323 aa8.13□□□□□ -1.11
CLSTN3-209ENST00000539982 RND3P61587 244 aa8.13□□□□□ -1.11
CLSTN3-209ENST00000539982 FAM78BQ5VT40 261 aa8.13□□□□□ -1.11
CLSTN3-209ENST00000539982 Q9H8V8 135 aa8.13□□□□□ -1.11
CLSTN3-209ENST00000539982 F5H768 121 aa8.12□□□□□ -1.11
CLSTN3-209ENST00000539982 TOMM40O96008 361 aa8.12□□□□□ -1.11
CLSTN3-209ENST00000539982 PSMB3P49720 205 aa8.12□□□□□ -1.11
CLSTN3-209ENST00000539982 PAX9P55771 341 aa8.12□□□□□ -1.11
CLSTN3-209ENST00000539982 SPCS3P61009 180 aa8.12□□□□□ -1.11
CLSTN3-209ENST00000539982 EBLN2Q6P2I7 272 aa8.12□□□□□ -1.11
CLSTN3-209ENST00000539982 C12orf45Q8N5I9 185 aaPredicted RBP8.12□□□□□ -1.11
CLSTN3-209ENST00000539982 COQ8AQ8NI60 647 aa8.12□□□□□ -1.11
CLSTN3-209ENST00000539982 RNASEH2CQ8TDP1 164 aaKnown RBP8.12□□□□□ -1.11
CLSTN3-209ENST00000539982 TP53RKQ96S44 253 aa8.12□□□□□ -1.11
CLSTN3-209ENST00000539982 TMEM208Q9BTX3 173 aa8.12□□□□□ -1.11
CLSTN3-209ENST00000539982 NAA60Q9H7X0 242 aa8.12□□□□□ -1.11
CLSTN3-209ENST00000539982 PFDN2Q9UHV9 154 aa8.12□□□□□ -1.11
CLSTN3-209ENST00000539982 A0A0J9YX75 114 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 F6UB75 175 aa8.11□□□□□ -1.11
CLSTN3-209ENST00000539982 SOCS3O14543 225 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms