RNA–Protein interactions for RNA: ENST00000539699.5

DDX11-215, Transcript of DEAD/H-box helicase 11, human

TSL 2

Gene DDX11, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-215	ENST00000539699	SLC35G3	Q8N808	338 aa		11.69	□□□□□ -0.54
DDX11-215	ENST00000539699	GLMP	Q8WWB7	406 aa		11.69	□□□□□ -0.54
DDX11-215	ENST00000539699	RRNAD1	Q96FB5	475 aa	Known RBP	11.69	□□□□□ -0.54
DDX11-215	ENST00000539699	TMED3	Q9Y3Q3	217 aa		11.69	□□□□□ -0.54
DDX11-215	ENST00000539699		A0A0B4J293	547 aa		11.68	□□□□□ -0.54
DDX11-215	ENST00000539699	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.68	□□□□□ -0.54
DDX11-215	ENST00000539699	ZNF705D	P0CH99	300 aa	Predicted RBP	11.68	□□□□□ -0.54
DDX11-215	ENST00000539699	ZNF705B	P0CI00	300 aa	Predicted RBP	11.68	□□□□□ -0.54
DDX11-215	ENST00000539699	OPRK1	P41145	380 aa		11.68	□□□□□ -0.54
DDX11-215	ENST00000539699	EMP1	P54849	157 aa		11.68	□□□□□ -0.54
DDX11-215	ENST00000539699	SNRPD3	P62318	126 aa	Known RBP	11.68	□□□□□ -0.54
DDX11-215	ENST00000539699	TIGIT	Q495A1	244 aa		11.68	□□□□□ -0.54
DDX11-215	ENST00000539699	TMEM268	Q5VZI3	342 aa		11.68	□□□□□ -0.54
DDX11-215	ENST00000539699	SELENOH	Q8IZQ5	122 aa	Known RBP	11.68	□□□□□ -0.54
DDX11-215	ENST00000539699	RNASE11	Q8TAA1	199 aa	Known RBP	11.68	□□□□□ -0.54
DDX11-215	ENST00000539699	C7orf66	A4D0T2	115 aa		11.67	□□□□□ -0.54
DDX11-215	ENST00000539699	SMIM9	A6NGZ8	99 aa		11.67	□□□□□ -0.54
DDX11-215	ENST00000539699	FAM90A26	D6RGX4	464 aa		11.67	□□□□□ -0.54
DDX11-215	ENST00000539699	IGKV1-5	P01602	117 aa		11.67	□□□□□ -0.54
DDX11-215	ENST00000539699	SLC25A6	P12236	298 aa		11.67	□□□□□ -0.54
DDX11-215	ENST00000539699	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.67	□□□□□ -0.54
DDX11-215	ENST00000539699	MAPKAPK5-AS1	Q8N8E1	139 aa		11.67	□□□□□ -0.54
DDX11-215	ENST00000539699	SEPSECS	Q9HD40	501 aa	Known RBP	11.67	□□□□□ -0.54
DDX11-215	ENST00000539699	DKK2	Q9UBU2	259 aa		11.67	□□□□□ -0.54
DDX11-215	ENST00000539699	NACA	E9PAV3	2078 aa		11.66	□□□□□ -0.54
DDX11-215	ENST00000539699	TRAV30	A0A087WSZ9	112 aa		11.66	□□□□□ -0.54
DDX11-215	ENST00000539699	C16orf90	A8MZG2	172 aa		11.66	□□□□□ -0.54
DDX11-215	ENST00000539699	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
DDX11-215	ENST00000539699		P0C879	139 aa		11.66	□□□□□ -0.54
DDX11-215	ENST00000539699	LHFPL5	Q8TAF8	219 aa		11.66	□□□□□ -0.54
DDX11-215	ENST00000539699	NIPSNAP3B	Q9BS92	247 aa		11.66	□□□□□ -0.54
DDX11-215	ENST00000539699	HLA-DRB4	P13762	266 aa		11.65	□□□□□ -0.54
DDX11-215	ENST00000539699	FAM222A	Q5U5X8	452 aa		11.65	□□□□□ -0.54
DDX11-215	ENST00000539699		Q8WTZ3	238 aa		11.65	□□□□□ -0.54
DDX11-215	ENST00000539699	SEC22C	Q9BRL7	303 aa		11.65	□□□□□ -0.54
DDX11-215	ENST00000539699	PDCD10	Q9BUL8	212 aa		11.65	□□□□□ -0.54
DDX11-215	ENST00000539699	NRN1	Q9NPD7	142 aa		11.65	□□□□□ -0.54
DDX11-215	ENST00000539699	RFNG	Q9Y644	331 aa		11.65	□□□□□ -0.54
DDX11-215	ENST00000539699	HLA-DRB4	X5D2U9	266 aa		11.65	□□□□□ -0.54
DDX11-215	ENST00000539699	APOB	P04114	4563 aa	Known RBP	11.64	□□□□□ -0.55
DDX11-215	ENST00000539699	IGHV3OR16-12	A0A075B7B8	117 aa		11.64	□□□□□ -0.55
DDX11-215	ENST00000539699	TEX48	A0A1B0GUV7	120 aa		11.64	□□□□□ -0.55
DDX11-215	ENST00000539699	HOXA1	P49639	335 aa	Predicted RBP	11.64	□□□□□ -0.55
DDX11-215	ENST00000539699	TNP2	Q05952	138 aa		11.64	□□□□□ -0.55
DDX11-215	ENST00000539699	BSX	Q3C1V8	233 aa		11.64	□□□□□ -0.55
DDX11-215	ENST00000539699	AARD	Q4LEZ3	155 aa		11.64	□□□□□ -0.55
DDX11-215	ENST00000539699	NMS	Q5H8A3	153 aa		11.64	□□□□□ -0.55
DDX11-215	ENST00000539699	ENY2	Q9NPA8	101 aa		11.64	□□□□□ -0.55
DDX11-215	ENST00000539699	DNAH5	Q8TE73	4624 aa		11.63	□□□□□ -0.55
DDX11-215	ENST00000539699	IGLC1	P0CG04	106 aa		11.63	□□□□□ -0.55
DDX11-215	ENST00000539699	SULT1A3	P0DMM9	295 aa		11.63	□□□□□ -0.55
DDX11-215	ENST00000539699	SULT1A4	P0DMN0	295 aa		11.63	□□□□□ -0.55
DDX11-215	ENST00000539699	HTN3	P15516	51 aa		11.63	□□□□□ -0.55
DDX11-215	ENST00000539699	NKX2-1	P43699	371 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX11-215	ENST00000539699	YPEL3	P61236	119 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX11-215	ENST00000539699	LYZL2	Q7Z4W2	148 aa		11.63	□□□□□ -0.55
DDX11-215	ENST00000539699	OR1S2	Q8NGQ3	325 aa		11.63	□□□□□ -0.55
DDX11-215	ENST00000539699	OR52E5	Q8NH55	327 aa		11.63	□□□□□ -0.55
DDX11-215	ENST00000539699	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX11-215	ENST00000539699	HERC1	Q15751	4861 aa		11.63	□□□□□ -0.55
DDX11-215	ENST00000539699	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.62	□□□□□ -0.55
DDX11-215	ENST00000539699	BUB3	O43684	328 aa		11.62	□□□□□ -0.55
DDX11-215	ENST00000539699	HOXB5	P09067	269 aa		11.62	□□□□□ -0.55
DDX11-215	ENST00000539699	FXYD7	P58549	80 aa		11.62	□□□□□ -0.55
DDX11-215	ENST00000539699	SMCO1	Q147U7	214 aa		11.62	□□□□□ -0.55
DDX11-215	ENST00000539699	USF2	Q15853	346 aa	Predicted RBP	11.62	□□□□□ -0.55
DDX11-215	ENST00000539699	GDF5OS	Q5U4N7	250 aa		11.62	□□□□□ -0.55
DDX11-215	ENST00000539699	GGNBP1	Q5YKI7	109 aa		11.62	□□□□□ -0.55
DDX11-215	ENST00000539699	PRSS54	Q6PEW0	395 aa		11.62	□□□□□ -0.55
DDX11-215	ENST00000539699	TMEM88	Q6PEY1	159 aa		11.62	□□□□□ -0.55
DDX11-215	ENST00000539699	SIGLEC15	Q6ZMC9	328 aa		11.62	□□□□□ -0.55
DDX11-215	ENST00000539699	GPR146	Q96CH1	333 aa		11.62	□□□□□ -0.55
DDX11-215	ENST00000539699	ALG5	Q9Y673	324 aa		11.62	□□□□□ -0.55
DDX11-215	ENST00000539699	SSNA1	O43805	119 aa		11.61	□□□□□ -0.55
DDX11-215	ENST00000539699	IGKV3-20	P01619	116 aa		11.61	□□□□□ -0.55
DDX11-215	ENST00000539699	IL4	P05112	153 aa		11.61	□□□□□ -0.55
DDX11-215	ENST00000539699	OR10J1	P30954	320 aa		11.61	□□□□□ -0.55
DDX11-215	ENST00000539699	FAM3B	P58499	235 aa	Predicted RBP	11.61	□□□□□ -0.55
DDX11-215	ENST00000539699		Q8N1X5	172 aa		11.61	□□□□□ -0.55
DDX11-215	ENST00000539699	ASB13	Q8WXK3	278 aa		11.61	□□□□□ -0.55
DDX11-215	ENST00000539699	PRR13	Q9NZ81	148 aa		11.61	□□□□□ -0.55
DDX11-215	ENST00000539699		A0A0G2JRQ6	117 aa		11.6	□□□□□ -0.55
DDX11-215	ENST00000539699	SLC25A4	P12235	298 aa		11.6	□□□□□ -0.55
DDX11-215	ENST00000539699	RND2	P52198	227 aa		11.6	□□□□□ -0.55
DDX11-215	ENST00000539699	DEFB1	P60022	68 aa		11.6	□□□□□ -0.55
DDX11-215	ENST00000539699	GSG1L	Q6UXU4	331 aa		11.6	□□□□□ -0.55
DDX11-215	ENST00000539699		Q6ZNX1	250 aa		11.6	□□□□□ -0.55
DDX11-215	ENST00000539699	ZNF709	Q8N972	641 aa		11.6	□□□□□ -0.55
DDX11-215	ENST00000539699	CACNG5	Q9UF02	275 aa		11.6	□□□□□ -0.55
DDX11-215	ENST00000539699	PITX3	O75364	302 aa		11.59	□□□□□ -0.55
DDX11-215	ENST00000539699	ADAP1	O75689	374 aa		11.59	□□□□□ -0.55
DDX11-215	ENST00000539699	HTR2B	P41595	481 aa		11.59	□□□□□ -0.55
DDX11-215	ENST00000539699	SPCS3	P61009	180 aa		11.59	□□□□□ -0.55
DDX11-215	ENST00000539699	CYCS	P99999	105 aa	Known RBP	11.59	□□□□□ -0.55
DDX11-215	ENST00000539699	OR1S1	Q8NH92	325 aa		11.59	□□□□□ -0.55
DDX11-215	ENST00000539699	CLUHP3	Q96NS8	147 aa		11.59	□□□□□ -0.55
DDX11-215	ENST00000539699	MED28	Q9H204	178 aa		11.59	□□□□□ -0.55
DDX11-215	ENST00000539699	SAV1	Q9H4B6	383 aa	Predicted RBP	11.59	□□□□□ -0.55
DDX11-215	ENST00000539699	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.59	□□□□□ -0.55
DDX11-215	ENST00000539699	MED6	O75586	246 aa		11.58	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms