RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 PSG1P11464 419 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 MORN3Q6PF18 240 aaPredicted RBP5.33□□□□□ -1.56
LSAMP-207ENST00000539563 SPCS1Q9Y6A9 102 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 IGKV1-27A0A075B6S5 117 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 NPIPB5A8MRT5 1133 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 UBE2CO00762 179 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 NAPSAO96009 420 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 TFF1P04155 84 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 IGKV1D-8A0A087WSZ0 117 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 IGHG3P01860 377 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 SRD5A1P18405 259 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 C5orf64Q2M2E5 130 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 CD177Q8N6Q3 437 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 CLDN16Q9Y5I7 305 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 LY96Q9Y6Y9 160 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 IGKV3D-20A0A0C4DH25 116 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 MST1P26927 711 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 NMSQ5H8A3 153 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 C1QL4Q86Z23 238 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 RCHY1Q96PM5 261 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 GATA3P23771 443 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 NSUN5P1Q3KNT7 163 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 C9orf139Q6ZV77 190 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 PHLDA1Q8WV24 401 aaPredicted RBP5.32□□□□□ -1.56
LSAMP-207ENST00000539563 ST6GALNAC6Q969X2 333 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 LAMTOR2Q9Y2Q5 125 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 GTF3C1Q12789 2109 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 TRBV24-1A0A075B6N3 115 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 A0A1B0GV72 72 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 ITGB1BP1O14713 200 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 Q0VFX4 171 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 Q6ZS92 163 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 FOXL2NBQ6ZUU3 175 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 LINC01356Q8N9X3 169 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 GAFA1Q96PS6 74 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 PAX2Q02962 417 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 TMEM155Q4W5P6 130 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 FBLN7Q53RD9 439 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 SCRT1Q9BWW7 348 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 SIGLEC9Q9Y336 463 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 ZNF407Q9C0G0 2248 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 PSPNO60542 156 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 SSBP4Q9BWG4 385 aaPredicted RBP5.32□□□□□ -1.56
LSAMP-207ENST00000539563 EML6Q6ZMW3 1958 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 IGKV2-40A0A087WW87 121 aaPredicted RBP5.32□□□□□ -1.56
LSAMP-207ENST00000539563 NDUFS8O00217 210 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 IGKV2D-40P01614 121 aaPredicted RBP5.32□□□□□ -1.56
LSAMP-207ENST00000539563 SLC25A16P16260 332 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 B3GALT5-AS1P59052 145 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 DMRTA1Q5VZB9 504 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 TMEM14EPQ6UXP3 125 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 C1QTNF4Q9BXJ3 329 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 ZGRF1Q86YA3 2104 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 LOC105371267A0A1B0GV96 52 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 SNAI2O43623 268 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 CKS1BP61024 79 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 SUPT4H1P63272 117 aaKnown RBP5.32□□□□□ -1.56
LSAMP-207ENST00000539563 ATRAIDQ6UW56 229 aa5.32□□□□□ -1.56
LSAMP-207ENST00000539563 TMEM8BA6NDV4 472 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 CA1P00915 261 aaPredicted RBP5.31□□□□□ -1.56
LSAMP-207ENST00000539563 SEC11AP67812 179 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 PSG3Q16557 428 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 NOTCH4Q99466 2003 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 CEP192Q8TEP8 1941 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 SRSF3P84103 164 aaKnown RBP5.31□□□□□ -1.56
LSAMP-207ENST00000539563 KLRD1Q13241 179 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 TRAV2A0A0B4J234 112 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 VCYO14598 125 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 PPIFP30405 207 aaKnown RBP5.31□□□□□ -1.56
LSAMP-207ENST00000539563 LCN12Q6JVE5 192 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 LYL1P12980 280 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 PLEKHB2Q96CS7 222 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 A0A087WV48 116 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 TRAV5A0A0B4J249 113 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 ZNF815PA8K554 130 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 FOXG1P55316 489 aaPredicted RBP5.31□□□□□ -1.56
LSAMP-207ENST00000539563 QRFPP83859 136 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 RPL36AP83881 106 aaKnown RBP5.31□□□□□ -1.56
LSAMP-207ENST00000539563 HSD52Q0P140 79 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 C21orf62-AS1Q17RA5 79 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 ORAOV1Q8WV07 137 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 RPL36ALQ969Q0 106 aaKnown RBP5.31□□□□□ -1.56
LSAMP-207ENST00000539563 UNQ6494/PRO21346Q6UXR6 183 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 TMEM219Q86XT9 240 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 EXOC3-AS1Q8N2X6 119 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 BMPERQ8N8U9 685 aa5.31□□□□□ -1.56
LSAMP-207ENST00000539563 ADAMTS9Q9P2N4 1935 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 TRAV8-2A0A0B4J237 113 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 TMEM238C9JI98 176 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 HIST1H2BKO60814 126 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 HIST1H2BJP06899 126 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 HIST1H2BOP23527 126 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 HIST1H2BBP33778 126 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 HIST1H2BDP58876 126 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 HIST1H2BCP62807 126 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 HIST2H2BEQ16778 126 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.3□□□□□ -1.56
LSAMP-207ENST00000539563 RPRMLQ8N4K4 120 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 LINC00469Q8N7U9 141 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 HIST1H2BHQ93079 126 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms