RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 TEX38Q6PEX7 206 aa7.05□□□□□ -1.28
RTN4IP1-204ENST00000539449 TOMM20LQ6UXN7 152 aa7.05□□□□□ -1.28
RTN4IP1-204ENST00000539449 DPPA3Q6W0C5 159 aa7.05□□□□□ -1.28
RTN4IP1-204ENST00000539449 COMMD7Q86VX2 200 aa7.05□□□□□ -1.28
RTN4IP1-204ENST00000539449 RNF152Q8N8N0 203 aa7.05□□□□□ -1.28
RTN4IP1-204ENST00000539449 OR1B1Q8NGR6 318 aa7.05□□□□□ -1.28
RTN4IP1-204ENST00000539449 GATAD1Q8WUU5 269 aa7.05□□□□□ -1.28
RTN4IP1-204ENST00000539449 SFT2D1Q8WV19 159 aa7.05□□□□□ -1.28
RTN4IP1-204ENST00000539449 ZNF503Q96F45 646 aa7.05□□□□□ -1.28
RTN4IP1-204ENST00000539449 FAM167A-AS1Q96KT0 104 aa7.05□□□□□ -1.28
RTN4IP1-204ENST00000539449 JMJD8Q96S16 334 aa7.05□□□□□ -1.28
RTN4IP1-204ENST00000539449 MAP1LC3BQ9GZQ8 125 aa7.05□□□□□ -1.28
RTN4IP1-204ENST00000539449 ZFAND3Q9H8U3 227 aa7.05□□□□□ -1.28
RTN4IP1-204ENST00000539449 DNAJC4Q9NNZ3 241 aa7.05□□□□□ -1.28
RTN4IP1-204ENST00000539449 KCNIP2Q9NS61 270 aa7.05□□□□□ -1.28
RTN4IP1-204ENST00000539449 MRPL27Q9P0M9 148 aaKnown RBP7.05□□□□□ -1.28
RTN4IP1-204ENST00000539449 PUS1Q9Y606 427 aaKnown RBP eCLIP7.05□□□□□ -1.28
RTN4IP1-204ENST00000539449 BMPR1BO00238 502 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 COX7A2P2O60397 106 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 HYPMO75409 117 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 NDUFA7O95182 113 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 IL4P05112 153 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 STAG3L2P0CL84 134 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 STAG3L3P0CL85 134 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 CD28P10747 220 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 ARL3P36405 182 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 KRTAP10-3P60369 221 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 RPL15P61313 204 aaKnown RBP7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 C10orf113Q5VZT2 155 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 LEMD1Q68G75 181 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 ZNF600Q6ZNG1 722 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 C11orf44Q8N8P7 122 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 Q8WTZ3 238 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 RNF125Q96EQ8 232 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 PBDC1Q9BVG4 233 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 SLC25A2Q9BXI2 301 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 MED9Q9NWA0 146 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 FUT9Q9Y231 359 aa7.04□□□□□ -1.28
RTN4IP1-204ENST00000539449 IGHV4OR15-8A0A075B7B6 117 aa7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 A0A087WW49 117 aa7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 TRAV1-1A0A0B4J248 108 aa7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 A0A0G2JLM5 398 aa7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 A0A1W2PPV4 95 aa7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 CLPSL1A2RUU4 121 aa7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 C9JQL5 133 aa7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 J3QL48 77 aa7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 NUPL2O15504 423 aaKnown RBP7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 ZNF207O43670 478 aaKnown RBP7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 SNRPCP09234 159 aaKnown RBP7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 EDN2P20800 178 aa7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 RHOBP62745 196 aa7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 UNQ9165/PRO28630Q6UXU0 137 aa7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 OR1L4Q8NGR5 311 aa7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 MARC2Q969Z3 335 aa7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 RARRES2Q99969 163 aa7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 TMEM231Q9H6L2 316 aa7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 PEF1Q9UBV8 284 aaKnown RBP7.03□□□□□ -1.28
RTN4IP1-204ENST00000539449 IGHV3-49A0A0A0MS15 119 aa7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 H3BRN7 92 aa7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 APOHP02749 345 aaPredicted RBP7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 FABP1P07148 127 aa7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 ARL14EPLP0DKL9 152 aa7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 C8orf88P0DMB2 117 aa7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 PYYP10082 97 aa7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 PROK1P58294 105 aa7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 HAGHQ16775 308 aa7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 LINC00305Q7Z4B0 112 aa7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 UBE2E2Q96LR5 201 aa7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 CITED4Q96RK1 184 aa7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 ATP6V0BQ99437 205 aa7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 SLC25A39Q9BZJ4 359 aaPredicted RBP7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 GAR1Q9NY12 217 aaKnown RBP7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 TECRQ9NZ01 308 aaKnown RBP7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 PFDN2Q9UHV9 154 aa7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 HIGD1AQ9Y241 93 aa7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 RNF114Q9Y508 228 aa7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 TENM3Q9P273 2699 aa7.02□□□□□ -1.29
RTN4IP1-204ENST00000539449 IGHV3OR16-13A0A075B7E8 117 aa7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 ELOA3CA0A087WX78 387 aaPredicted RBP7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 IGHV3-74A0A0B4J1X5 117 aa7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 H3BTX0 84 aa7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 I3L521 148 aa7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 ATP6V1G1O75348 118 aa7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 HBE1P02100 147 aa7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 HSPB1P04792 205 aaKnown RBP7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 LGALS1P09382 135 aaKnown RBP7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 OR10J4P0C629 311 aa7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 GCHFRP30047 84 aa7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 NDUFA5Q16718 116 aa7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 DEFB136Q30KP8 78 aa7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 TOR2AQ5JU69 321 aa7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 IL34Q6ZMJ4 242 aa7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 IQCF2Q8IXL9 164 aa7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 COMMD1Q8N668 190 aa7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 FAM210AQ96ND0 272 aa7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 DUX3Q96PT4 197 aa7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 PFDN5Q99471 154 aa7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 RNF2Q99496 336 aa7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 CITED2Q99967 270 aaPredicted RBP7.01□□□□□ -1.29
RTN4IP1-204ENST00000539449 SHANK2-AS3Q9BTD1 123 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms