RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 C9orf170A2RU37 121 aa16.05■□□□□ 0.16
SCARB1-206ENST00000539320 H3BP45 60 aa16.05■□□□□ 0.16
SCARB1-206ENST00000539320 SOCS3O14543 225 aa16.05■□□□□ 0.16
SCARB1-206ENST00000539320 DEDDO75618 318 aa16.05■□□□□ 0.16
SCARB1-206ENST00000539320 CFDP00746 253 aaPredicted RBP16.05■□□□□ 0.16
SCARB1-206ENST00000539320 BAK1Q16611 211 aa16.05■□□□□ 0.16
SCARB1-206ENST00000539320 SPANXN5Q5MJ07 72 aa16.05■□□□□ 0.16
SCARB1-206ENST00000539320 RPP25LQ8N5L8 163 aaKnown RBP16.05■□□□□ 0.16
SCARB1-206ENST00000539320 COQ8AQ8NI60 647 aa16.05■□□□□ 0.16
SCARB1-206ENST00000539320 LINC00052Q96N35 136 aa16.05■□□□□ 0.16
SCARB1-206ENST00000539320 DNAH10Q8IVF4 4471 aa16.04■□□□□ 0.16
SCARB1-206ENST00000539320 FOXI2Q6ZQN5 318 aa16.04■□□□□ 0.16
SCARB1-206ENST00000539320 ACOT7LQ6ZUV0 252 aa16.04■□□□□ 0.16
SCARB1-206ENST00000539320 OR8I2Q8N0Y5 310 aa16.04■□□□□ 0.16
SCARB1-206ENST00000539320 STRAPQ9Y3F4 350 aaKnown RBP16.04■□□□□ 0.16
SCARB1-206ENST00000539320 ADAP1O75689 374 aa16.03■□□□□ 0.16
SCARB1-206ENST00000539320 DEFB1P60022 68 aa16.03■□□□□ 0.16
SCARB1-206ENST00000539320 AKR1C1Q04828 323 aa16.03■□□□□ 0.16
SCARB1-206ENST00000539320 GDF5OSQ5U4N7 250 aa16.03■□□□□ 0.16
SCARB1-206ENST00000539320 SAMD13Q5VXD3 122 aa16.03■□□□□ 0.16
SCARB1-206ENST00000539320 Q6ZTC4 211 aa16.03■□□□□ 0.16
SCARB1-206ENST00000539320 SAV1Q9H4B6 383 aaPredicted RBP16.03■□□□□ 0.16
SCARB1-206ENST00000539320 SLC45A2Q9UMX9 530 aa16.03■□□□□ 0.16
SCARB1-206ENST00000539320 TRAV10A0A0B4J240 114 aa16.02■□□□□ 0.16
SCARB1-206ENST00000539320 IGLL5B9A064 214 aa16.02■□□□□ 0.16
SCARB1-206ENST00000539320 BPIFCQ8NFQ6 507 aa16.02■□□□□ 0.16
SCARB1-206ENST00000539320 CELA1Q9UNI1 258 aa16.02■□□□□ 0.16
SCARB1-206ENST00000539320 FLVCR2Q9UPI3 526 aa16.02■□□□□ 0.16
SCARB1-206ENST00000539320 FRAS1Q86XX4 4008 aa16.01■□□□□ 0.15
SCARB1-206ENST00000539320 ISLRO14498 428 aa16.01■□□□□ 0.15
SCARB1-206ENST00000539320 IGKV3-20P01619 116 aa16.01■□□□□ 0.15
SCARB1-206ENST00000539320 GALR1P47211 349 aa16.01■□□□□ 0.15
SCARB1-206ENST00000539320 POLR2GP62487 172 aaKnown RBP eCLIP16.01■□□□□ 0.15
SCARB1-206ENST00000539320 ID3Q02535 119 aa16.01■□□□□ 0.15
SCARB1-206ENST00000539320 SLC25A32Q9H2D1 315 aa16.01■□□□□ 0.15
SCARB1-206ENST00000539320 LINC00854A0A1B0GVQ3 168 aa16■□□□□ 0.15
SCARB1-206ENST00000539320 IFNA21P01568 189 aa16■□□□□ 0.15
SCARB1-206ENST00000539320 OR4E1P0C645 316 aa16■□□□□ 0.15
SCARB1-206ENST00000539320 MEOX2P50222 304 aa16■□□□□ 0.15
SCARB1-206ENST00000539320 OR4D5Q8NGN0 318 aa16■□□□□ 0.15
SCARB1-206ENST00000539320 SDHCQ99643 169 aaPredicted RBP16■□□□□ 0.15
SCARB1-206ENST00000539320 SLC25A22Q9H936 323 aa16■□□□□ 0.15
SCARB1-206ENST00000539320 APLNQ9ULZ1 77 aa16■□□□□ 0.15
SCARB1-206ENST00000539320 SMCO3A2RU48 225 aa15.99■□□□□ 0.15
SCARB1-206ENST00000539320 GATA2P23769 480 aaPredicted RBP15.99■□□□□ 0.15
SCARB1-206ENST00000539320 BTCP35070 178 aa15.99■□□□□ 0.15
SCARB1-206ENST00000539320 FXYD7P58549 80 aa15.99■□□□□ 0.15
SCARB1-206ENST00000539320 SPATA31B1PQ5VZV4 182 aa15.99■□□□□ 0.15
SCARB1-206ENST00000539320 GSG1LQ6UXU4 331 aa15.99■□□□□ 0.15
SCARB1-206ENST00000539320 ZNF705AQ6ZN79 300 aaPredicted RBP15.99■□□□□ 0.15
SCARB1-206ENST00000539320 CLUHP3Q96NS8 147 aa15.99■□□□□ 0.15
SCARB1-206ENST00000539320 C7orf50Q9BRJ6 194 aaKnown RBP15.99■□□□□ 0.15
SCARB1-206ENST00000539320 TMEM147Q9BVK8 224 aa15.99■□□□□ 0.15
SCARB1-206ENST00000539320 ZNF98A6NK75 572 aa15.98■□□□□ 0.15
SCARB1-206ENST00000539320 CENPXA8MT69 81 aa15.98■□□□□ 0.15
SCARB1-206ENST00000539320 SSSCA1O60232 199 aa15.98■□□□□ 0.15
SCARB1-206ENST00000539320 ORM2P19652 201 aa15.98■□□□□ 0.15
SCARB1-206ENST00000539320 ANXA7P20073 488 aaKnown RBP15.98■□□□□ 0.15
SCARB1-206ENST00000539320 S100A7P31151 101 aa15.98■□□□□ 0.15
SCARB1-206ENST00000539320 PAX9P55771 341 aa15.98■□□□□ 0.15
SCARB1-206ENST00000539320 C4orf46Q504U0 113 aa15.98■□□□□ 0.15
SCARB1-206ENST00000539320 TMEM144Q7Z5S9 345 aa15.98■□□□□ 0.15
SCARB1-206ENST00000539320 OR4B1Q8NGF8 309 aa15.98■□□□□ 0.15
SCARB1-206ENST00000539320 C16orf92Q96LL3 132 aa15.98■□□□□ 0.15
SCARB1-206ENST00000539320 NEU1Q99519 415 aa15.98■□□□□ 0.15
SCARB1-206ENST00000539320 PSENENQ9NZ42 101 aa15.98■□□□□ 0.15
SCARB1-206ENST00000539320 ZNF705FA8MVS1 300 aaPredicted RBP15.97■□□□□ 0.15
SCARB1-206ENST00000539320 ZNF705DP0CH99 300 aaPredicted RBP15.97■□□□□ 0.15
SCARB1-206ENST00000539320 ZNF705BP0CI00 300 aaPredicted RBP15.97■□□□□ 0.15
SCARB1-206ENST00000539320 EBLN2Q6P2I7 272 aa15.97■□□□□ 0.15
SCARB1-206ENST00000539320 TMEM182Q6ZP80 229 aaPredicted RBP15.97■□□□□ 0.15
SCARB1-206ENST00000539320 ZNF709Q8N972 641 aa15.97■□□□□ 0.15
SCARB1-206ENST00000539320 OR1B1Q8NGR6 318 aa15.97■□□□□ 0.15
SCARB1-206ENST00000539320 IGHV4-4A0A075B6R2 117 aa15.96■□□□□ 0.15
SCARB1-206ENST00000539320 F6UB75 175 aa15.96■□□□□ 0.15
SCARB1-206ENST00000539320 IL7P13232 177 aa15.96■□□□□ 0.15
SCARB1-206ENST00000539320 PRR20EP86478 221 aa15.96■□□□□ 0.15
SCARB1-206ENST00000539320 PRR20CP86479 221 aa15.96■□□□□ 0.15
SCARB1-206ENST00000539320 PRR20DP86480 221 aa15.96■□□□□ 0.15
SCARB1-206ENST00000539320 PRR20BP86481 221 aa15.96■□□□□ 0.15
SCARB1-206ENST00000539320 PRR20AP86496 221 aa15.96■□□□□ 0.15
SCARB1-206ENST00000539320 C12orf74Q32Q52 190 aa15.96■□□□□ 0.15
SCARB1-206ENST00000539320 CYP2G1PQ6ZSU1 146 aa15.96■□□□□ 0.15
SCARB1-206ENST00000539320 ZNF767PQ75MW2 155 aa15.96■□□□□ 0.15
SCARB1-206ENST00000539320 C20orf173Q96LM9 149 aa15.96■□□□□ 0.15
SCARB1-206ENST00000539320 GPR82Q96P67 336 aa15.96■□□□□ 0.15
SCARB1-206ENST00000539320 RSG1Q9BU20 258 aa15.96■□□□□ 0.15
SCARB1-206ENST00000539320 RNF126Q9BV68 326 aa15.96■□□□□ 0.15
SCARB1-206ENST00000539320 RPRMQ9NS64 109 aa15.96■□□□□ 0.15
SCARB1-206ENST00000539320 A0A0J9YX75 114 aa15.95■□□□□ 0.14
SCARB1-206ENST00000539320 PSG9Q00887 426 aa15.95■□□□□ 0.14
SCARB1-206ENST00000539320 FAM78BQ5VT40 261 aa15.95■□□□□ 0.14
SCARB1-206ENST00000539320 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.95■□□□□ 0.14
SCARB1-206ENST00000539320 SMIM8Q96KF7 97 aa15.95■□□□□ 0.14
SCARB1-206ENST00000539320 SCRT1Q9BWW7 348 aa15.95■□□□□ 0.14
SCARB1-206ENST00000539320 SLC35B3Q9H1N7 401 aa15.95■□□□□ 0.14
SCARB1-206ENST00000539320 DOK5Q9P104 306 aa15.95■□□□□ 0.14
SCARB1-206ENST00000539320 IGHV3OR16-12A0A075B7B8 117 aa15.94■□□□□ 0.14
SCARB1-206ENST00000539320 TMEM189A5PLL7 270 aa15.94■□□□□ 0.14
SCARB1-206ENST00000539320 SMIM9A6NGZ8 99 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 230.3 ms