RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 C12orf45Q8N5I9 185 aaPredicted RBP3.79□□□□□ -1.8
SSPN-206ENST00000539019 OR11H7Q8NGC8 314 aa3.79□□□□□ -1.8
SSPN-206ENST00000539019 MS4A10Q96PG2 267 aa3.79□□□□□ -1.8
SSPN-206ENST00000539019 CHRDL1Q9BU40 450 aa3.79□□□□□ -1.8
SSPN-206ENST00000539019 COMMD5Q9GZQ3 224 aa3.79□□□□□ -1.8
SSPN-206ENST00000539019 RBKSQ9H477 322 aa3.79□□□□□ -1.8
SSPN-206ENST00000539019 FKBP11Q9NYL4 201 aa3.79□□□□□ -1.8
SSPN-206ENST00000539019 ALG5Q9Y673 324 aa3.79□□□□□ -1.8
SSPN-206ENST00000539019 DNAH1Q9P2D7 4330 aa3.79□□□□□ -1.8
SSPN-206ENST00000539019 STAB2Q8WWQ8 2551 aa3.79□□□□□ -1.8
SSPN-206ENST00000539019 TCRBV4S1A1TA0A5B7 111 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 CREBL2O60519 120 aaPredicted RBP3.78□□□□□ -1.8
SSPN-206ENST00000539019 CCNKO75909 580 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 OR2J3O76001 311 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 CNIH1O95406 144 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 SIX6O95475 246 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 GATA2P23769 480 aaPredicted RBP3.78□□□□□ -1.8
SSPN-206ENST00000539019 S100GP29377 79 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 AKR1C2P52895 323 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 ERVK-16P61578 105 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 POLR2GP62487 172 aaKnown RBP eCLIP3.78□□□□□ -1.8
SSPN-206ENST00000539019 PNRC1Q12796 327 aaPredicted RBP3.78□□□□□ -1.8
SSPN-206ENST00000539019 CBX3Q13185 183 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 PLGLAQ15195 96 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 C15orf32Q32M92 178 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 PRSS54Q6PEW0 395 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 PLET1Q6UQ28 207 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 C3orf56Q8N813 242 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 NECAP1Q8NC96 275 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 OR4A16Q8NH70 328 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 VN1R17PQ8TDU5 208 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 BSCL2Q96G97 398 aaPredicted RBP3.78□□□□□ -1.8
SSPN-206ENST00000539019 USMG5Q96IX5 58 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 ATP6V0BQ99437 205 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 FBXL17Q9UF56 701 aa3.78□□□□□ -1.8
SSPN-206ENST00000539019 TENM3Q9P273 2699 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 FAM223BA6NKX1 122 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 K7EPK0 472 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 CCL24O00175 119 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 SYNGR2O43760 224 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 SNAPC5O75971 98 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 MT-CO2P00403 227 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 IGHV3-11P01762 117 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 TRGV3P03979 118 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 IGLC1P0CG04 106 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 C8orf88P0DMB2 117 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 ANXA3P12429 323 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 MYCNOSP40205 109 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 INPP1P49441 399 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 DEFA1P59665 94 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 DEFA3P59666 94 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 SLC35B1P78383 322 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 IAH1Q2TAA2 248 aaPredicted RBP3.77□□□□□ -1.81
SSPN-206ENST00000539019 UNQ9165/PRO28630Q6UXU0 137 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 TMEM182Q6ZP80 229 aaPredicted RBP3.77□□□□□ -1.81
SSPN-206ENST00000539019 FAM223AQ8IWN6 122 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 MAPKAPK5-AS1Q8N8E1 139 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 OR4X2Q8NGF9 303 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 COQ8AQ8NI60 647 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 ENKURQ8TC29 256 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 DLX4Q92988 240 aaPredicted RBP3.77□□□□□ -1.81
SSPN-206ENST00000539019 SMIM8Q96KF7 97 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 C2orf50Q96LR7 162 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 GON7Q9BXV9 100 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 ZNF436Q9C0F3 470 aaPredicted RBP3.77□□□□□ -1.81
SSPN-206ENST00000539019 MAGT1Q9H0U3 335 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 S4R3C0 116 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 STARD9Q9P2P6 4700 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 SACSQ9NZJ4 4579 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 COL7A1Q02388 2944 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 CSMD3Q7Z407 3707 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 TGP01266 2768 aa3.77□□□□□ -1.81
SSPN-206ENST00000539019 IGHV3-21A0A0B4J1V1 117 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 TMEM213A2RRL7 107 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 PPP5D1E7EU14 171 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 ATG12O94817 140 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 IGHV3-48P01763 117 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 HSPB1P04792 205 aaKnown RBP3.76□□□□□ -1.81
SSPN-206ENST00000539019 CSN3P07498 182 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 HIST1H1BP16401 226 aaKnown RBP3.76□□□□□ -1.81
SSPN-206ENST00000539019 BCAP31P51572 246 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 ATP5IP56385 69 aaPredicted RBP3.76□□□□□ -1.81
SSPN-206ENST00000539019 TPPP2P59282 170 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 TAS2R30P59541 319 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 EGFEM1PQ0D2K5 195 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 VWC2Q2TAL6 325 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 NSUN5P1Q3KNT7 163 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 GPHB5Q86YW7 130 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 THAP8Q8NA92 274 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 OR11H1Q8NG94 326 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 OR1N2Q8NGR9 330 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 OR4X1Q8NH49 305 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 RNASEH2CQ8TDP1 164 aaKnown RBP3.76□□□□□ -1.81
SSPN-206ENST00000539019 DTD1Q8TEA8 209 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 DCUN1D4Q92564 292 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 OR5B12Q96R08 314 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 PHB2Q99623 299 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 NMES1Q9C002 83 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 PLEKHA3Q9HB20 300 aa3.76□□□□□ -1.81
SSPN-206ENST00000539019 SIGLEC8Q9NYZ4 499 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms