RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 OXTP01178 125 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 TSHBP01222 138 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 P01737 135 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 IGHV3-13P01766 116 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 IGHV3-9P01782 118 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 IGHG4P01861 327 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 TTRP02766 147 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 MAS1P04201 325 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 GYPBP06028 91 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 CRYGDP07320 174 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 PFN1P07737 140 aaKnown RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 CD55P08174 381 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 OR4A8P0C604 315 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 OR5AL1P0C617 328 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 OR5G3P0C626 314 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 SMIM17P0DL12 118 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 CT45A10P0DMU9 189 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 SLC2A2P11168 524 aaPredicted RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 SELEP16581 610 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 ORM2P19652 201 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 CXCL2P19875 107 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 RAB5AP20339 215 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 EVI2AP22794 236 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 PSMB9P28065 219 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 GPR183P32249 361 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 G6PCP35575 357 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 ETV6P41212 452 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 GPR6P46095 362 aaPredicted RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 GPM6AP51674 278 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 APOC4P55056 127 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 SNRPD2P62316 118 aaKnown RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 EIF5AP63241 154 aaKnown RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 CX3CL1P78423 397 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 MEF2CQ06413 473 aaPredicted RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 BSPH1Q075Z2 132 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 PNRC1Q12796 327 aaPredicted RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 GAGE2BQ13066 116 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 PRDX4Q13162 271 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 HERPUD1Q15011 391 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 CDK5R1Q15078 307 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 CLEC12BQ2HXU8 276 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 KIAA1644Q3SXP7 199 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 GAGE2EQ4V326 116 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 NHLRC3Q5JS37 347 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 C1orf194Q5T5A4 169 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 BCL2L15Q5TBC7 163 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 SPATA31B1PQ5VZV4 182 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 OLFML2AQ68BL7 652 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 EIF5AL1Q6IS14 154 aaKnown RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 GAGE2AQ6NT46 116 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 SFXN4Q6P4A7 337 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 RPL22L1Q6P5R6 122 aaKnown RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 KCTD18Q6PI47 426 aaPredicted RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 GLIPR1L1Q6UWM5 242 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 LINC00299Q6ZSB3 139 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 SLC25A48Q6ZT89 311 aaKnown RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 PRSS48Q7RTY5 328 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 MDP1Q86V88 176 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 HOGA1Q86XE5 327 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 SPICQ8N5J4 248 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 TMEM86BQ8N661 226 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 TCEANCQ8N8B7 351 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 C15orf54Q8N8G6 183 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 SAMD12Q8N8I0 201 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 ZFP41Q8N8Y5 198 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 CNEP1R1Q8N9A8 125 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 TMEM229BQ8NBD8 167 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 OR52L1Q8NGH7 329 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 OR5A1Q8NGJ0 315 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 OR52E2Q8NGJ4 325 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 OR51A4Q8NGJ6 313 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 OR2T4Q8NH00 348 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 OR4K13Q8NH42 304 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 OR52N5Q8NH56 324 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 C11orf45Q8TAV5 145 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 LINC01560Q8TB33 94 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 THAP6Q8TBB0 222 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 VN1R17PQ8TDU5 208 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 RXFP4Q8TDU9 374 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 THEM6Q8WUY1 208 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 BLNKQ8WV28 456 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 APOBEC3DQ96AK3 386 aaPredicted RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 SLAMF6Q96DU3 332 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 ACY3Q96HD9 319 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 TMEM101Q96IK0 257 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 SEC22AQ96IW7 307 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 SMIM8Q96KF7 97 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 C4orf45Q96LM5 186 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 HYLS1Q96M11 299 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 C1orf147Q96MC9 270 aaPredicted RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 S100A13Q99584 98 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 NIPSNAP3BQ9BS92 247 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 ADAT1Q9BUB4 502 aaKnown RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 TMEM70Q9BUB7 260 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 LIME1Q9H400 295 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 CA10Q9NS85 328 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 CBLN4Q9NTU7 201 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 MED9Q9NWA0 146 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 TVP23BQ9NYZ1 205 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 KCNIP1Q9NZI2 227 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms