RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 CEACAM3P40198 252 aa19.72■□□□□ 0.75
RAB40C-204ENST00000538492 C5orf17Q8NAS9 161 aa19.72■□□□□ 0.75
RAB40C-204ENST00000538492 GRAMD2BQ96HH9 432 aa19.72■□□□□ 0.75
RAB40C-204ENST00000538492 KLF12Q9Y4X4 402 aa19.72■□□□□ 0.75
RAB40C-204ENST00000538492 TOX4O94842 621 aa19.72■□□□□ 0.75
RAB40C-204ENST00000538492 COX19Q49B96 90 aa19.72■□□□□ 0.75
RAB40C-204ENST00000538492 GPR82Q96P67 336 aa19.72■□□□□ 0.75
RAB40C-204ENST00000538492 HIVEP3Q5T1R4 2406 aa19.72■□□□□ 0.75
RAB40C-204ENST00000538492 ZNF705FA8MVS1 300 aaPredicted RBP19.71■□□□□ 0.75
RAB40C-204ENST00000538492 ZNF705DP0CH99 300 aaPredicted RBP19.71■□□□□ 0.75
RAB40C-204ENST00000538492 ZNF705BP0CI00 300 aaPredicted RBP19.71■□□□□ 0.75
RAB40C-204ENST00000538492 NEU4Q8WWR8 484 aaPredicted RBP19.71■□□□□ 0.75
RAB40C-204ENST00000538492 NOL4LQ96MY1 436 aaPredicted RBP19.71■□□□□ 0.75
RAB40C-204ENST00000538492 RCHY1Q96PM5 261 aa19.71■□□□□ 0.75
RAB40C-204ENST00000538492 TCRAP04437 139 aa19.71■□□□□ 0.75
RAB40C-204ENST00000538492 PRTN3P24158 256 aa19.71■□□□□ 0.75
RAB40C-204ENST00000538492 SLAQ13239 276 aa19.71■□□□□ 0.75
RAB40C-204ENST00000538492 ZNF586Q9NXT0 402 aa19.71■□□□□ 0.75
RAB40C-204ENST00000538492 A0A1W2PPR1 153 aa19.7■□□□□ 0.74
RAB40C-204ENST00000538492 M0R1W7 72 aa19.7■□□□□ 0.74
RAB40C-204ENST00000538492 APCSP02743 223 aa19.7■□□□□ 0.74
RAB40C-204ENST00000538492 HIST1H1EP10412 219 aaKnown RBP19.7■□□□□ 0.74
RAB40C-204ENST00000538492 CDKN1AP38936 164 aa19.7■□□□□ 0.74
RAB40C-204ENST00000538492 LINC00322Q6ZN03 302 aaPredicted RBP19.7■□□□□ 0.74
RAB40C-204ENST00000538492 TMEM68Q96MH6 324 aa19.7■□□□□ 0.74
RAB40C-204ENST00000538492 NEU1Q99519 415 aa19.7■□□□□ 0.74
RAB40C-204ENST00000538492 POLR3KQ9Y2Y1 108 aaPredicted RBP19.7■□□□□ 0.74
RAB40C-204ENST00000538492 ODF3BA8MYP8 253 aa19.7■□□□□ 0.74
RAB40C-204ENST00000538492 HIGD1CA8MV81 97 aa19.69■□□□□ 0.74
RAB40C-204ENST00000538492 NDUFS7O75251 213 aa19.69■□□□□ 0.74
RAB40C-204ENST00000538492 ZNF253O75346 499 aa19.69■□□□□ 0.74
RAB40C-204ENST00000538492 LY6DQ14210 128 aa19.69■□□□□ 0.74
RAB40C-204ENST00000538492 EXOC3-AS1Q8N2X6 119 aa19.69■□□□□ 0.74
RAB40C-204ENST00000538492 RBM14Q96PK6 669 aaKnown RBP19.69■□□□□ 0.74
RAB40C-204ENST00000538492 SRSF8Q9BRL6 282 aaKnown RBP19.69■□□□□ 0.74
RAB40C-204ENST00000538492 LURAP1LQ8IV03 231 aa19.69■□□□□ 0.74
RAB40C-204ENST00000538492 DYNAPQ8N1N2 210 aa19.69■□□□□ 0.74
RAB40C-204ENST00000538492 NPBQ8NG41 125 aa19.69■□□□□ 0.74
RAB40C-204ENST00000538492 TBX15Q96SF7 602 aa19.69■□□□□ 0.74
RAB40C-204ENST00000538492 MLST8Q9BVC4 326 aa19.69■□□□□ 0.74
RAB40C-204ENST00000538492 TRAV8-1A0A0A6YYK1 113 aa19.68■□□□□ 0.74
RAB40C-204ENST00000538492 BRS3P32247 399 aa19.68■□□□□ 0.74
RAB40C-204ENST00000538492 TSKUQ8WUA8 353 aa19.68■□□□□ 0.74
RAB40C-204ENST00000538492 MRPL27Q9P0M9 148 aaKnown RBP19.68■□□□□ 0.74
RAB40C-204ENST00000538492 A6NNC1 897 aa19.68■□□□□ 0.74
RAB40C-204ENST00000538492 NDUFA3O95167 84 aa19.68■□□□□ 0.74
RAB40C-204ENST00000538492 PRB4P10163 310 aaPredicted RBP19.68■□□□□ 0.74
RAB40C-204ENST00000538492 GDF5OSQ5U4N7 250 aa19.68■□□□□ 0.74
RAB40C-204ENST00000538492 TOMM20LQ6UXN7 152 aa19.68■□□□□ 0.74
RAB40C-204ENST00000538492 VMO1Q7Z5L0 202 aa19.68■□□□□ 0.74
RAB40C-204ENST00000538492 FMC1Q96HJ9 113 aa19.68■□□□□ 0.74
RAB40C-204ENST00000538492 TOMM40O96008 361 aa19.67■□□□□ 0.74
RAB40C-204ENST00000538492 OR10J3Q5JRS4 329 aa19.67■□□□□ 0.74
RAB40C-204ENST00000538492 PRR31Q5SQ13 230 aa19.67■□□□□ 0.74
RAB40C-204ENST00000538492 CAMPP49913 170 aa19.67■□□□□ 0.74
RAB40C-204ENST00000538492 C5orf64Q2M2E5 130 aa19.67■□□□□ 0.74
RAB40C-204ENST00000538492 NCBP2LA6PVI3 153 aaKnown RBP19.66■□□□□ 0.74
RAB40C-204ENST00000538492 VWC2LB2RUY7 222 aa19.66■□□□□ 0.74
RAB40C-204ENST00000538492 LTAP01374 205 aa19.66■□□□□ 0.74
RAB40C-204ENST00000538492 ZFP36P26651 326 aaKnown RBP19.66■□□□□ 0.74
RAB40C-204ENST00000538492 SIGLECL1Q8N7X8 197 aa19.66■□□□□ 0.74
RAB40C-204ENST00000538492 CHRDL1Q9BU40 450 aa19.66■□□□□ 0.74
RAB40C-204ENST00000538492 TCF24Q7RTU0 167 aa19.66■□□□□ 0.74
RAB40C-204ENST00000538492 SSBP4Q9BWG4 385 aaPredicted RBP19.66■□□□□ 0.74
RAB40C-204ENST00000538492 GPX1P07203 203 aa19.65■□□□□ 0.74
RAB40C-204ENST00000538492 GPR6P46095 362 aaPredicted RBP19.65■□□□□ 0.74
RAB40C-204ENST00000538492 C17orf77Q96MU5 243 aa19.65■□□□□ 0.74
RAB40C-204ENST00000538492 TMEM14CQ9P0S9 112 aa19.65■□□□□ 0.74
RAB40C-204ENST00000538492 RNF114Q9Y508 228 aa19.65■□□□□ 0.74
RAB40C-204ENST00000538492 AKAP6Q13023 2319 aa19.65■□□□□ 0.74
RAB40C-204ENST00000538492 WIPF2Q8TF74 440 aaPredicted RBP19.65■□□□□ 0.74
RAB40C-204ENST00000538492 NDUFAF3Q9BU61 184 aa19.65■□□□□ 0.74
RAB40C-204ENST00000538492 OTORQ9NRC9 128 aa19.65■□□□□ 0.74
RAB40C-204ENST00000538492 ITPR1Q14643 2758 aa19.64■□□□□ 0.74
RAB40C-204ENST00000538492 IL4P05112 153 aa19.64■□□□□ 0.73
RAB40C-204ENST00000538492 PMCHP20382 165 aa19.64■□□□□ 0.73
RAB40C-204ENST00000538492 Q71RC1 249 aaPredicted RBP19.64■□□□□ 0.73
RAB40C-204ENST00000538492 SMIM12Q96EX1 92 aa19.64■□□□□ 0.73
RAB40C-204ENST00000538492 TBL2Q9Y4P3 447 aaKnown RBP19.64■□□□□ 0.73
RAB40C-204ENST00000538492 A0A1W2PS18 150 aa19.64■□□□□ 0.73
RAB40C-204ENST00000538492 AMTP48728 403 aa19.64■□□□□ 0.73
RAB40C-204ENST00000538492 TDRG1Q3Y452 100 aa19.64■□□□□ 0.73
RAB40C-204ENST00000538492 GOLT1AQ6ZVE7 132 aa19.64■□□□□ 0.73
RAB40C-204ENST00000538492 DTX2Q86UW9 622 aa19.64■□□□□ 0.73
RAB40C-204ENST00000538492 KIR3DL3Q8N743 410 aa19.64■□□□□ 0.73
RAB40C-204ENST00000538492 KCNS1Q96KK3 526 aa19.64■□□□□ 0.73
RAB40C-204ENST00000538492 RPP21Q9H633 154 aaKnown RBP19.64■□□□□ 0.73
RAB40C-204ENST00000538492 NDPQ00604 133 aa19.63■□□□□ 0.73
RAB40C-204ENST00000538492 ZNF491Q8N8L2 437 aa19.63■□□□□ 0.73
RAB40C-204ENST00000538492 RNF125Q96EQ8 232 aa19.63■□□□□ 0.73
RAB40C-204ENST00000538492 C1orf194Q5T5A4 169 aa19.63■□□□□ 0.73
RAB40C-204ENST00000538492 RASL11AQ6T310 242 aa19.63■□□□□ 0.73
RAB40C-204ENST00000538492 VN1R17PQ8TDU5 208 aa19.63■□□□□ 0.73
RAB40C-204ENST00000538492 SHANK2-AS3Q9BTD1 123 aa19.63■□□□□ 0.73
RAB40C-204ENST00000538492 FBXL7Q9UJT9 491 aa19.63■□□□□ 0.73
RAB40C-204ENST00000538492 P01737 135 aa19.62■□□□□ 0.73
RAB40C-204ENST00000538492 BCL6BQ8N143 479 aaPredicted RBP19.62■□□□□ 0.73
RAB40C-204ENST00000538492 PRNTQ86SH4 94 aa19.62■□□□□ 0.73
RAB40C-204ENST00000538492 CIARTQ8N365 385 aaPredicted RBP19.62■□□□□ 0.73
RAB40C-204ENST00000538492 ARPC1AQ92747 370 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms