RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 LINC00173Q6ZV60 143 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 PHLDA1Q8WV24 401 aaPredicted RBP5.38□□□□□ -1.55
USP28-207ENST00000538475 RND1Q92730 232 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 ARPC1AQ92747 370 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 FXYD5Q96DB9 178 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 PRRG4Q9BZD6 226 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 CXXC4Q9H2H0 198 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 ZMAT4Q9H898 229 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 Q9UFV3 132 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 CACNA1EQ15878 2313 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 A0A1B0GWB2 263 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 TCRBV4S1A1TA0A5B7 111 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 SH2D7A6NKC9 451 aaPredicted RBP5.37□□□□□ -1.55
USP28-207ENST00000538475 PATE3B3GLJ2 98 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 M0QXV9 152 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 CA1P00915 261 aaPredicted RBP5.37□□□□□ -1.55
USP28-207ENST00000538475 SLC25A5P05141 298 aaKnown RBP5.37□□□□□ -1.55
USP28-207ENST00000538475 CRYGCP07315 174 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 RNASE2P10153 161 aaKnown RBP5.37□□□□□ -1.55
USP28-207ENST00000538475 COX6A1P12074 109 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 EVI2AP22794 236 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 PLA2G5P39877 138 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 UQCRFS1P47985 274 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 CEBPDP49716 269 aaPredicted RBP5.37□□□□□ -1.55
USP28-207ENST00000538475 CCL11P51671 97 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 TFF2Q03403 129 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 GAGE13Q4V321 117 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 ABHD17BQ5VST6 288 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 ZNF788Q6ZQV5 615 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 PPP1R32Q7Z5V6 425 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 WDR86Q86TI4 376 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 OR10X1Q8NGY0 326 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 Q8TCH9 128 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 BADQ92934 168 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 ZNF414Q96IQ9 312 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 SPAG8Q99932 426 aaPredicted RBP5.37□□□□□ -1.55
USP28-207ENST00000538475 SPANXDQ9BXN6 97 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 KRTAP3-1Q9BYR8 98 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 OTORQ9NRC9 128 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 THYN1Q9P016 225 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 TMEM14CQ9P0S9 112 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 ERG28Q9UKR5 140 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 INSIG2Q9Y5U4 225 aa5.37□□□□□ -1.55
USP28-207ENST00000538475 DNAJC13O75165 2243 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 IGHV1OR15-9A0A0B4J2B8 117 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 IGLL5B9A064 214 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 PROP1O75360 226 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 ATP5LO75964 103 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 CER1O95813 267 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 MEF2CQ06413 473 aaPredicted RBP5.36□□□□□ -1.55
USP28-207ENST00000538475 GAGE5Q13069 117 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 GAGE6Q13070 117 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 TMEM108Q6UXF1 575 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 Q6ZR03 302 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 CEND1Q8N111 149 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 BCL6BQ8N143 479 aaPredicted RBP5.36□□□□□ -1.55
USP28-207ENST00000538475 LYPD1Q8N2G4 141 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 ZCCHC24Q8N2G6 241 aaKnown RBP5.36□□□□□ -1.55
USP28-207ENST00000538475 OSR1Q8TAX0 266 aaPredicted RBP5.36□□□□□ -1.55
USP28-207ENST00000538475 IFI27L1Q96BM0 104 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 RAX2Q96IS3 184 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 PGLYRP4Q96LB8 373 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 RPP25Q9BUL9 199 aaKnown RBP5.36□□□□□ -1.55
USP28-207ENST00000538475 TMEM133Q9H2Q1 129 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 LINC00574Q9H8X3 128 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 GNG12Q9UBI6 72 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 B4GALT7Q9UBV7 327 aa5.36□□□□□ -1.55
USP28-207ENST00000538475 IGKV1OR2-108A0A075B7D4 117 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 KBTBD11-OT1A0A1B0GTJ5 212 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 FSTL3O95633 263 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 MT-CO3P00414 261 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 MOSP00540 346 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 TCRAP04437 139 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 CGB3P0DN86 165 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 CGB7P0DN87 165 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 LOXL3P58215 753 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 SRSF2Q01130 221 aaKnown RBP5.35□□□□□ -1.55
USP28-207ENST00000538475 TMEM200BQ69YZ2 307 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 PVRIGQ6DKI7 326 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 S100A7AQ86SG5 101 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 YRDCQ86U90 279 aaKnown RBP5.35□□□□□ -1.55
USP28-207ENST00000538475 ORMDL3Q8N138 153 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 TMEM75Q8N9X5 138 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 OR13A1Q8NGR1 328 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 ITLN1Q8WWA0 313 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 ZNF479Q96JC4 524 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 TRGV9Q99603 122 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 FAM110AQ9BQ89 295 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 C1QTNF4Q9BXJ3 329 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 SLC25A39Q9BZJ4 359 aaPredicted RBP5.35□□□□□ -1.55
USP28-207ENST00000538475 MRPS17Q9Y2R5 130 aaKnown RBP5.35□□□□□ -1.55
USP28-207ENST00000538475 LINC00312Q9Y6C7 94 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 KNTC1P50748 2209 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 DSCAMO60469 2012 aa5.35□□□□□ -1.55
USP28-207ENST00000538475 A0A0C4DFX4 3053 aa5.34□□□□□ -1.55
USP28-207ENST00000538475 TRAV3A0A0B4J244 114 aa5.34□□□□□ -1.55
USP28-207ENST00000538475 PGPA6NDG6 321 aa5.34□□□□□ -1.55
USP28-207ENST00000538475 SLC25A17O43808 307 aa5.34□□□□□ -1.55
USP28-207ENST00000538475 AGFG2O95081 481 aa5.34□□□□□ -1.55
USP28-207ENST00000538475 FCGR2BP31994 310 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms