RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 DEFB130BP0DP73 79 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 DEFB130AP0DP74 79 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 GZMBP10144 247 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 NTF4P34130 210 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 SSBP4Q9BWG4 385 aaPredicted RBP4.35□□□□□ -1.71
LRP6-203ENST00000538239 EP300Q09472 2414 aaPredicted RBP4.34□□□□□ -1.71
LRP6-203ENST00000538239 COL6A6A6NMZ7 2263 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 E9PQ18 207 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.34□□□□□ -1.71
LRP6-203ENST00000538239 INSP01308 110 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 CD5P06127 495 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 COX6CP09669 75 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 CACNG7P62955 275 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 WDR86Q86TI4 376 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 OR11H1Q8NG94 326 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 RNF222A6NCQ9 220 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 IGKV1-5P01602 117 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 RPL24P83731 157 aaKnown RBP4.34□□□□□ -1.71
LRP6-203ENST00000538239 ADORA2A-AS1P86434 159 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 MLANAQ16655 118 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 ESPL1Q14674 2120 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 TRAV8-6A0A0B4J262 113 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 IZUMO1RA6ND01 250 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 FBLL1A6NHQ2 334 aaKnown RBP4.34□□□□□ -1.71
LRP6-203ENST00000538239 TMEM250H0YL14 139 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 VENTXO95231 258 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 HINT1P49773 126 aaPredicted RBP4.34□□□□□ -1.71
LRP6-203ENST00000538239 PRR31Q5SQ13 230 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 Q8TAT8 98 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 IGFBPL1Q8WX77 278 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 ZNF414Q96IQ9 312 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 TRGV9Q99603 122 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 DAZ1Q9NQZ3 744 aaKnown RBP4.34□□□□□ -1.71
LRP6-203ENST00000538239 LTBP2Q14767 1821 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 ICE1Q9Y2F5 2266 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 A0A087X0M5 115 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 A0A1B0GX30 115 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 TOMM40O96008 361 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 MPZP25189 248 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 FHL1Q13642 323 aa4.34□□□□□ -1.71
LRP6-203ENST00000538239 IGHV4-30-2A0A087WSY4 118 aa4.34□□□□□ -1.72
LRP6-203ENST00000538239 IGLV1-44P01699 117 aa4.34□□□□□ -1.72
LRP6-203ENST00000538239 SRP19P09132 144 aaKnown RBP4.34□□□□□ -1.72
LRP6-203ENST00000538239 LOXP28300 417 aaPredicted RBP4.34□□□□□ -1.72
LRP6-203ENST00000538239 ERCC8Q13216 396 aa4.34□□□□□ -1.72
LRP6-203ENST00000538239 DEFB112Q30KQ8 113 aa4.34□□□□□ -1.72
LRP6-203ENST00000538239 IGF2-ASQ6U949 168 aa4.34□□□□□ -1.72
LRP6-203ENST00000538239 GGTLC1Q9BX51 225 aa4.34□□□□□ -1.72
LRP6-203ENST00000538239 A0A1W2PNU3 283 aaPredicted RBP4.34□□□□□ -1.72
LRP6-203ENST00000538239 ZNF98A6NK75 572 aa4.34□□□□□ -1.72
LRP6-203ENST00000538239 CD28P10747 220 aa4.34□□□□□ -1.72
LRP6-203ENST00000538239 ID3Q02535 119 aa4.34□□□□□ -1.72
LRP6-203ENST00000538239 ORMDL3Q8N138 153 aa4.34□□□□□ -1.72
LRP6-203ENST00000538239 MRPS16Q9Y3D3 137 aaKnown RBP4.34□□□□□ -1.72
LRP6-203ENST00000538239 SOX21Q9Y651 276 aaPredicted RBP4.34□□□□□ -1.72
LRP6-203ENST00000538239 PGPEP1LA6NFU8 196 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 LDLRAD4O15165 306 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 HOXB4P17483 251 aaPredicted RBP4.33□□□□□ -1.72
LRP6-203ENST00000538239 IFI27P40305 119 aaPredicted RBP4.33□□□□□ -1.72
LRP6-203ENST00000538239 VCX2Q9H322 139 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 ALPK2Q86TB3 2170 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 A0A087WX48 190 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 C17orf58Q2M2W7 97 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 Q6AWC8 147 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 C1QTNF4Q9BXJ3 329 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 SEPSECSQ9HD40 501 aaKnown RBP4.33□□□□□ -1.72
LRP6-203ENST00000538239 XCL2Q9UBD3 114 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 TRBV6-6A0A0A6YYG2 114 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 COTL1Q14019 142 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 TMEM249Q2WGJ8 235 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 DENND4CQ5VZ89 1909 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 IGLV3-9A0A075B6K5 115 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 IGHV2-5P01817 119 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 IGHV4-59P01825 116 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 QRFPP83859 136 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 TCF23Q7RTU1 214 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 RTTNQ86VV8 2226 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 NDUFB8O95169 186 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 CA1P00915 261 aaPredicted RBP4.33□□□□□ -1.72
LRP6-203ENST00000538239 HOXA5P20719 270 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 JOSD1Q15040 202 aaPredicted RBP4.33□□□□□ -1.72
LRP6-203ENST00000538239 LY6G6FQ5SQ64 297 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 C9orf139Q6ZV77 190 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 RNF182Q8N6D2 247 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 WDR83OSQ9Y284 106 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 A0A1W2PPI3 338 aa4.33□□□□□ -1.72
LRP6-203ENST00000538239 KLF2Q9Y5W3 355 aaPredicted RBP4.33□□□□□ -1.72
LRP6-203ENST00000538239 IGHV3-64A0A075B6Q5 118 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 H0YIZ8 118 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 CCL20P78556 96 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 TEX36Q5VZQ5 186 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 IGFL2Q6UWQ7 119 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.32□□□□□ -1.72
LRP6-203ENST00000538239 CDX1P47902 265 aaPredicted RBP4.32□□□□□ -1.72
LRP6-203ENST00000538239 ZNF138P52744 262 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 DIAPH2-AS1Q14236 149 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 SPTA1P02549 2419 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 IGHV4-61A0A0C4DH41 118 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 A0A1B0GW15 77 aa4.32□□□□□ -1.72
LRP6-203ENST00000538239 A0A1W2PRE2 83 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms