RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 BUB3O43684 328 aa9.76□□□□□ -0.85
CHFR-216ENST00000538235 GIPP09681 153 aaPredicted RBP9.76□□□□□ -0.85
CHFR-216ENST00000538235 PVALBP20472 110 aaPredicted RBP9.76□□□□□ -0.85
CHFR-216ENST00000538235 CYCSP99999 105 aaKnown RBP9.76□□□□□ -0.85
CHFR-216ENST00000538235 GUCA2BQ16661 112 aa9.76□□□□□ -0.85
CHFR-216ENST00000538235 CLLU1Q5K131 121 aa9.76□□□□□ -0.85
CHFR-216ENST00000538235 C16orf54Q6UWD8 224 aa9.76□□□□□ -0.85
CHFR-216ENST00000538235 TCF24Q7RTU0 167 aa9.76□□□□□ -0.85
CHFR-216ENST00000538235 OR5C1Q8NGR4 320 aa9.76□□□□□ -0.85
CHFR-216ENST00000538235 GINS3Q9BRX5 216 aa9.76□□□□□ -0.85
CHFR-216ENST00000538235 TMEM147Q9BVK8 224 aa9.76□□□□□ -0.85
CHFR-216ENST00000538235 MED9Q9NWA0 146 aa9.76□□□□□ -0.85
CHFR-216ENST00000538235 DOK5Q9P104 306 aa9.76□□□□□ -0.85
CHFR-216ENST00000538235 UBQLN2Q9UHD9 624 aa9.76□□□□□ -0.85
CHFR-216ENST00000538235 SLC45A2Q9UMX9 530 aa9.76□□□□□ -0.85
CHFR-216ENST00000538235 HSPB11Q9Y547 144 aa9.76□□□□□ -0.85
CHFR-216ENST00000538235 RNF222A6NCQ9 220 aa9.75□□□□□ -0.85
CHFR-216ENST00000538235 CLINT1Q14677 625 aa9.75□□□□□ -0.85
CHFR-216ENST00000538235 SMUG1Q53HV7 270 aa9.75□□□□□ -0.85
CHFR-216ENST00000538235 MIC13Q5XKP0 118 aa9.75□□□□□ -0.85
CHFR-216ENST00000538235 TEX261Q6UWH6 196 aa9.75□□□□□ -0.85
CHFR-216ENST00000538235 GBGT1Q8N5D6 347 aa9.75□□□□□ -0.85
CHFR-216ENST00000538235 BPIFCQ8NFQ6 507 aa9.75□□□□□ -0.85
CHFR-216ENST00000538235 THAP6Q8TBB0 222 aa9.75□□□□□ -0.85
CHFR-216ENST00000538235 UHRF2Q96PU4 802 aa9.75□□□□□ -0.85
CHFR-216ENST00000538235 METTL26Q96S19 204 aa9.75□□□□□ -0.85
CHFR-216ENST00000538235 GGACTQ9BVM4 153 aa9.75□□□□□ -0.85
CHFR-216ENST00000538235 SCRT1Q9BWW7 348 aa9.75□□□□□ -0.85
CHFR-216ENST00000538235 SMIM3Q9BZL3 60 aa9.75□□□□□ -0.85
CHFR-216ENST00000538235 NPVFQ9HCQ7 196 aa9.75□□□□□ -0.85
CHFR-216ENST00000538235 TMA7Q9Y2S6 64 aaKnown RBP9.75□□□□□ -0.85
CHFR-216ENST00000538235 H3BRN7 92 aa9.74□□□□□ -0.85
CHFR-216ENST00000538235 NPPCP23582 126 aa9.74□□□□□ -0.85
CHFR-216ENST00000538235 TFPI2P48307 235 aa9.74□□□□□ -0.85
CHFR-216ENST00000538235 CD81P60033 236 aa9.74□□□□□ -0.85
CHFR-216ENST00000538235 PRR20EP86478 221 aa9.74□□□□□ -0.85
CHFR-216ENST00000538235 PRR20CP86479 221 aa9.74□□□□□ -0.85
CHFR-216ENST00000538235 PRR20DP86480 221 aa9.74□□□□□ -0.85
CHFR-216ENST00000538235 PRR20BP86481 221 aa9.74□□□□□ -0.85
CHFR-216ENST00000538235 PRR20AP86496 221 aa9.74□□□□□ -0.85
CHFR-216ENST00000538235 OPCMLQ14982 345 aa9.74□□□□□ -0.85
CHFR-216ENST00000538235 LEMD1Q68G75 181 aa9.74□□□□□ -0.85
CHFR-216ENST00000538235 TEPPQ6URK8 271 aa9.74□□□□□ -0.85
CHFR-216ENST00000538235 DEFB125Q8N687 156 aa9.74□□□□□ -0.85
CHFR-216ENST00000538235 ARPC5LQ9BPX5 153 aa9.74□□□□□ -0.85
CHFR-216ENST00000538235 SLC25A32Q9H2D1 315 aa9.74□□□□□ -0.85
CHFR-216ENST00000538235 UQCC1Q9NVA1 299 aa9.74□□□□□ -0.85
CHFR-216ENST00000538235 SMAD5-AS1Q9Y6J3 95 aa9.74□□□□□ -0.85
CHFR-216ENST00000538235 TRAV25A0A0B4J276 109 aa9.73□□□□□ -0.85
CHFR-216ENST00000538235 KRBOX1C9JBD0 128 aa9.73□□□□□ -0.85
CHFR-216ENST00000538235 IGHV4-30-4P0DP06 118 aa9.73□□□□□ -0.85
CHFR-216ENST00000538235 RPL12P30050 165 aaKnown RBP9.73□□□□□ -0.85
CHFR-216ENST00000538235 PLP1P60201 277 aa9.73□□□□□ -0.85
CHFR-216ENST00000538235 GCSAMLQ5JQS6 135 aa9.73□□□□□ -0.85
CHFR-216ENST00000538235 STX12Q86Y82 276 aa9.73□□□□□ -0.85
CHFR-216ENST00000538235 OR11H4Q8NGC9 324 aa9.73□□□□□ -0.85
CHFR-216ENST00000538235 DCANP1Q8TF63 244 aa9.73□□□□□ -0.85
CHFR-216ENST00000538235 TMEM37Q8WXS4 190 aa9.73□□□□□ -0.85
CHFR-216ENST00000538235 SPAG8Q99932 426 aaPredicted RBP9.73□□□□□ -0.85
CHFR-216ENST00000538235 MS4A6AQ9H2W1 248 aa9.73□□□□□ -0.85
CHFR-216ENST00000538235 RABAC1Q9UI14 185 aa9.73□□□□□ -0.85
CHFR-216ENST00000538235 K7EQG2 157 aa9.72□□□□□ -0.85
CHFR-216ENST00000538235 MRPS12O15235 138 aaKnown RBP9.72□□□□□ -0.85
CHFR-216ENST00000538235 FRMD6-AS1P0C7T7 363 aa9.72□□□□□ -0.85
CHFR-216ENST00000538235 ORM2P19652 201 aa9.72□□□□□ -0.85
CHFR-216ENST00000538235 FGF7P21781 194 aa9.72□□□□□ -0.85
CHFR-216ENST00000538235 S100A11P31949 105 aa9.72□□□□□ -0.85
CHFR-216ENST00000538235 DEFB1P60022 68 aa9.72□□□□□ -0.85
CHFR-216ENST00000538235 RAP2BP61225 183 aa9.72□□□□□ -0.85
CHFR-216ENST00000538235 BAXQ07812 192 aa9.72□□□□□ -0.85
CHFR-216ENST00000538235 LINC00322Q6ZN03 302 aaPredicted RBP9.72□□□□□ -0.85
CHFR-216ENST00000538235 C9orf62Q8N4C0 152 aa9.72□□□□□ -0.85
CHFR-216ENST00000538235 ZNF680Q8NEM1 530 aa9.72□□□□□ -0.85
CHFR-216ENST00000538235 OR1B1Q8NGR6 318 aa9.72□□□□□ -0.85
CHFR-216ENST00000538235 OR2T35Q8NGX2 323 aa9.72□□□□□ -0.85
CHFR-216ENST00000538235 NPCDR1Q9BY65 106 aa9.72□□□□□ -0.85
CHFR-216ENST00000538235 MAP6D1Q9H9H5 199 aa9.72□□□□□ -0.85
CHFR-216ENST00000538235 FBXL17Q9UF56 701 aa9.72□□□□□ -0.85
CHFR-216ENST00000538235 RBMY1BA6NDE4 496 aaKnown RBP9.71□□□□□ -0.86
CHFR-216ENST00000538235 RBMY1EA6NEQ0 496 aaKnown RBP9.71□□□□□ -0.86
CHFR-216ENST00000538235 SOCS3O14543 225 aa9.71□□□□□ -0.86
CHFR-216ENST00000538235 SCGB2A1O75556 95 aa9.71□□□□□ -0.86
CHFR-216ENST00000538235 RLN2P04090 185 aa9.71□□□□□ -0.86
CHFR-216ENST00000538235 RBMY1DP0C7P1 496 aaKnown RBP9.71□□□□□ -0.86
CHFR-216ENST00000538235 CAMLGP49069 296 aa9.71□□□□□ -0.86
CHFR-216ENST00000538235 RBPMS2Q6ZRY4 209 aaKnown RBP9.71□□□□□ -0.86
CHFR-216ENST00000538235 WFDC3Q8IUB2 231 aa9.71□□□□□ -0.86
CHFR-216ENST00000538235 AQP10Q96PS8 301 aa9.71□□□□□ -0.86
CHFR-216ENST00000538235 ATP5SQ99766 215 aa9.71□□□□□ -0.86
CHFR-216ENST00000538235 ASCL2Q99929 193 aa9.71□□□□□ -0.86
CHFR-216ENST00000538235 RSG1Q9BU20 258 aa9.71□□□□□ -0.86
CHFR-216ENST00000538235 SLC25A39Q9BZJ4 359 aaPredicted RBP9.71□□□□□ -0.86
CHFR-216ENST00000538235 WDR61Q9GZS3 305 aaKnown RBP9.71□□□□□ -0.86
CHFR-216ENST00000538235 SLC25A31Q9H0C2 315 aa9.71□□□□□ -0.86
CHFR-216ENST00000538235 ARL6Q9H0F7 186 aa9.71□□□□□ -0.86
CHFR-216ENST00000538235 TNFSF18Q9UNG2 199 aa9.71□□□□□ -0.86
CHFR-216ENST00000538235 ZNF98A6NK75 572 aa9.7□□□□□ -0.86
CHFR-216ENST00000538235 EIF3GO75821 320 aaKnown RBP eCLIP9.7□□□□□ -0.86
CHFR-216ENST00000538235 PET100P0DJ07 73 aa9.7□□□□□ -0.86
CHFR-216ENST00000538235 PRB4P10163 310 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms