RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 GDF5OSQ5U4N7 250 aa6.14□□□□□ -1.43
SPARC-208ENST00000538026 ZFAND6Q6FIF0 208 aa6.14□□□□□ -1.43
SPARC-208ENST00000538026 MZT2BQ6NZ67 158 aa6.14□□□□□ -1.43
SPARC-208ENST00000538026 Q6ZWC4 215 aa6.14□□□□□ -1.43
SPARC-208ENST00000538026 TRPT1Q86TN4 253 aaKnown RBP6.14□□□□□ -1.43
SPARC-208ENST00000538026 GRAMD2BQ96HH9 432 aa6.14□□□□□ -1.43
SPARC-208ENST00000538026 C2orf50Q96LR7 162 aa6.14□□□□□ -1.43
SPARC-208ENST00000538026 MARVELD1Q9BSK0 173 aa6.14□□□□□ -1.43
SPARC-208ENST00000538026 PBDC1Q9BVG4 233 aa6.14□□□□□ -1.43
SPARC-208ENST00000538026 CSTL1Q9H114 145 aa6.14□□□□□ -1.43
SPARC-208ENST00000538026 TMEM231Q9H6L2 316 aa6.14□□□□□ -1.43
SPARC-208ENST00000538026 HECTD4Q9Y4D8 3996 aa6.14□□□□□ -1.43
SPARC-208ENST00000538026 BIRC6Q9NR09 4857 aa6.14□□□□□ -1.43
SPARC-208ENST00000538026 PKD1P98161 4303 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 IGSF23A1L1A6 192 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 ZNF98A6NK75 572 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 FAM25EA8MYX2 175 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 INMT-MINDY4F8WBC2 141 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 SPRY2O43597 315 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 DEDDO75618 318 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 LINC00869P0C866 280 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 C4BPBP20851 252 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 BMI1P35226 326 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 RPP30P78346 268 aaKnown RBP6.13□□□□□ -1.43
SPARC-208ENST00000538026 DLK1P80370 383 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 RAB32Q13637 225 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 SIGLEC15Q6ZMC9 328 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 CYP2G1PQ6ZSU1 146 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 CSNK1G2-AS1Q8NCQ2 148 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 C20orf173Q96LM9 149 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 SLC25A32Q9H2D1 315 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 SLC45A2Q9UMX9 530 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 TP53TG1Q9Y2A0 90 aa6.13□□□□□ -1.43
SPARC-208ENST00000538026 LSM5Q9Y4Y9 91 aaKnown RBP6.13□□□□□ -1.43
SPARC-208ENST00000538026 TRAV8-2A0A0B4J237 113 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 A0A0J9YWU9 116 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 C5orf51A6NDU8 294 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 HELTA6NFD8 242 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 FNDC10F2Z333 226 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 UBE2CO00762 179 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 MRPS12O15235 138 aaKnown RBP6.12□□□□□ -1.43
SPARC-208ENST00000538026 SCGB2A1O75556 95 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 CST7O76096 145 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 LYL1P12980 280 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 ORM2P19652 201 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 APOC4P55056 127 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 CMC4P56277 68 aaPredicted RBP6.12□□□□□ -1.43
SPARC-208ENST00000538026 H2BFSP57053 126 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 PLP1P60201 277 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 SLC38A11Q08AI6 406 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 PSMG4Q5JS54 123 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 C1orf194Q5T5A4 169 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 MORN5Q5VZ52 161 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 ENKURQ8TC29 256 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 MGST2Q99735 147 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 RNF126Q9BV68 326 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 SCRT1Q9BWW7 348 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 NRN1Q9NPD7 142 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 OR5AC2Q9NZP5 309 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 PKHD1P08F94 4074 aa6.12□□□□□ -1.43
SPARC-208ENST00000538026 SMCO3A2RU48 225 aa6.11□□□□□ -1.43
SPARC-208ENST00000538026 H3BMM0 161 aa6.11□□□□□ -1.43
SPARC-208ENST00000538026 H3BRN7 92 aa6.11□□□□□ -1.43
SPARC-208ENST00000538026 AP2S1P53680 142 aaPredicted RBP6.11□□□□□ -1.43
SPARC-208ENST00000538026 AKR1C1Q04828 323 aa6.11□□□□□ -1.43
SPARC-208ENST00000538026 VWC2Q2TAL6 325 aa6.11□□□□□ -1.43
SPARC-208ENST00000538026 ACTL10Q5JWF8 245 aa6.11□□□□□ -1.43
SPARC-208ENST00000538026 IGFL4Q6B9Z1 124 aa6.11□□□□□ -1.43
SPARC-208ENST00000538026 TMEM252Q8N6L7 170 aa6.11□□□□□ -1.43
SPARC-208ENST00000538026 BPIFCQ8NFQ6 507 aa6.11□□□□□ -1.43
SPARC-208ENST00000538026 OR10P1Q8NGE3 313 aa6.11□□□□□ -1.43
SPARC-208ENST00000538026 OR1B1Q8NGR6 318 aa6.11□□□□□ -1.43
SPARC-208ENST00000538026 TMEM37Q8WXS4 190 aa6.11□□□□□ -1.43
SPARC-208ENST00000538026 NARS2Q96I59 477 aaKnown RBP6.11□□□□□ -1.43
SPARC-208ENST00000538026 UHRF2Q96PU4 802 aa6.11□□□□□ -1.43
SPARC-208ENST00000538026 SHANK2-AS3Q9BTD1 123 aa6.11□□□□□ -1.43
SPARC-208ENST00000538026 RSG1Q9BU20 258 aa6.11□□□□□ -1.43
SPARC-208ENST00000538026 SLC25A39Q9BZJ4 359 aaPredicted RBP6.11□□□□□ -1.43
SPARC-208ENST00000538026 NPVFQ9HCQ7 196 aa6.11□□□□□ -1.43
SPARC-208ENST00000538026 SEPSECSQ9HD40 501 aaKnown RBP6.11□□□□□ -1.43
SPARC-208ENST00000538026 DOK5Q9P104 306 aa6.11□□□□□ -1.43
SPARC-208ENST00000538026 F6UB75 175 aa6.1□□□□□ -1.43
SPARC-208ENST00000538026 GOSR2O14653 212 aa6.1□□□□□ -1.43
SPARC-208ENST00000538026 AGPAT2O15120 278 aa6.1□□□□□ -1.43
SPARC-208ENST00000538026 CFDP00746 253 aaPredicted RBP6.1□□□□□ -1.43
SPARC-208ENST00000538026 CA1P00915 261 aaPredicted RBP6.1□□□□□ -1.43
SPARC-208ENST00000538026 PRB4P10163 310 aaPredicted RBP6.1□□□□□ -1.43
SPARC-208ENST00000538026 HLA-DMBP28068 263 aa6.1□□□□□ -1.43
SPARC-208ENST00000538026 NHLH2Q02577 135 aa6.1□□□□□ -1.43
SPARC-208ENST00000538026 OR8I2Q8N0Y5 310 aa6.1□□□□□ -1.43
SPARC-208ENST00000538026 TMEM217Q8N7C4 229 aa6.1□□□□□ -1.43
SPARC-208ENST00000538026 IL17DQ8TAD2 202 aa6.1□□□□□ -1.43
SPARC-208ENST00000538026 GGACTQ9BVM4 153 aa6.1□□□□□ -1.43
SPARC-208ENST00000538026 LYRM2Q9NU23 88 aaPredicted RBP6.1□□□□□ -1.43
SPARC-208ENST00000538026 CLEC5AQ9NY25 188 aa6.1□□□□□ -1.43
SPARC-208ENST00000538026 WDR83OSQ9Y284 106 aa6.1□□□□□ -1.43
SPARC-208ENST00000538026 X6R8D5 127 aa6.1□□□□□ -1.43
SPARC-208ENST00000538026 DEFB4AO15263 64 aa6.09□□□□□ -1.43
SPARC-208ENST00000538026 HYPMO75409 117 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms