RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 BRS3P32247 399 aa13.74□□□□□ -0.21
SNX17-210ENST00000537606 PAX8Q06710 450 aa13.74□□□□□ -0.21
SNX17-210ENST00000537606 ZNF329Q86UD4 541 aa13.74□□□□□ -0.21
SNX17-210ENST00000537606 TMEM183AQ8IXX5 376 aa13.74□□□□□ -0.21
SNX17-210ENST00000537606 IGF2BP2-AS1Q96M15 143 aa13.74□□□□□ -0.21
SNX17-210ENST00000537606 SOX21Q9Y651 276 aaPredicted RBP13.74□□□□□ -0.21
SNX17-210ENST00000537606 LY96Q9Y6Y9 160 aa13.74□□□□□ -0.21
SNX17-210ENST00000537606 CBLN1P23435 193 aa13.74□□□□□ -0.21
SNX17-210ENST00000537606 PACRGQ96M98 296 aaPredicted RBP13.74□□□□□ -0.21
SNX17-210ENST00000537606 TRAV40A0A0B4J280 105 aa13.73□□□□□ -0.21
SNX17-210ENST00000537606 VWC2LB2RUY7 222 aa13.73□□□□□ -0.21
SNX17-210ENST00000537606 OR2J3O76001 311 aa13.73□□□□□ -0.21
SNX17-210ENST00000537606 SLC35B1P78383 322 aa13.73□□□□□ -0.21
SNX17-210ENST00000537606 TMEM219Q86XT9 240 aa13.73□□□□□ -0.21
SNX17-210ENST00000537606 HIGD1AQ9Y241 93 aa13.73□□□□□ -0.21
SNX17-210ENST00000537606 USP9YO00507 2555 aaPredicted RBP13.73□□□□□ -0.21
SNX17-210ENST00000537606 IGLV11-55A0A075B6I3 123 aa13.73□□□□□ -0.21
SNX17-210ENST00000537606 LINC01548A6NM66 108 aa13.73□□□□□ -0.21
SNX17-210ENST00000537606 NPIPB5A8MRT5 1133 aa13.73□□□□□ -0.21
SNX17-210ENST00000537606 TCL1AP56279 114 aa13.73□□□□□ -0.21
SNX17-210ENST00000537606 OR8I2Q8N0Y5 310 aa13.73□□□□□ -0.21
SNX17-210ENST00000537606 TTC9CQ8N5M4 171 aa13.73□□□□□ -0.21
SNX17-210ENST00000537606 RPH3ALQ9UNE2 315 aa13.73□□□□□ -0.21
SNX17-210ENST00000537606 LINC00587B1AMM8 73 aa13.72□□□□□ -0.21
SNX17-210ENST00000537606 NDUFB8O95169 186 aa13.72□□□□□ -0.21
SNX17-210ENST00000537606 CA1P00915 261 aaPredicted RBP13.72□□□□□ -0.21
SNX17-210ENST00000537606 BCL6BQ8N143 479 aaPredicted RBP13.72□□□□□ -0.21
SNX17-210ENST00000537606 C1RLQ9NZP8 487 aa13.72□□□□□ -0.21
SNX17-210ENST00000537606 POLR3KQ9Y2Y1 108 aaPredicted RBP13.72□□□□□ -0.21
SNX17-210ENST00000537606 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.72□□□□□ -0.213e-8■■■■□ 26.1
SNX17-210ENST00000537606 AMBPP02760 352 aa13.72□□□□□ -0.21
SNX17-210ENST00000537606 NBEAP1P0C6P0 100 aa13.72□□□□□ -0.21
SNX17-210ENST00000537606 PLP1P60201 277 aa13.72□□□□□ -0.21
SNX17-210ENST00000537606 ECSCRQ19T08 205 aa13.72□□□□□ -0.21
SNX17-210ENST00000537606 OR1L6Q8NGR2 347 aa13.72□□□□□ -0.21
SNX17-210ENST00000537606 TMUB1Q9BVT8 246 aa13.72□□□□□ -0.21
SNX17-210ENST00000537606 SLC25A39Q9BZJ4 359 aaPredicted RBP13.72□□□□□ -0.21
SNX17-210ENST00000537606 PEX7O00628 323 aa13.71□□□□□ -0.21
SNX17-210ENST00000537606 ISLRO14498 428 aa13.71□□□□□ -0.21
SNX17-210ENST00000537606 GNG7O60262 68 aa13.71□□□□□ -0.21
SNX17-210ENST00000537606 GOSR1O95249 250 aa13.71□□□□□ -0.21
SNX17-210ENST00000537606 GCGP01275 180 aa13.71□□□□□ -0.21
SNX17-210ENST00000537606 ADMP35318 185 aa13.71□□□□□ -0.21
SNX17-210ENST00000537606 CNN1P51911 297 aaKnown RBP13.71□□□□□ -0.21
SNX17-210ENST00000537606 RPEL1Q2QD12 228 aa13.71□□□□□ -0.21
SNX17-210ENST00000537606 IGHV4-38-2P0DP08 117 aa13.71□□□□□ -0.22
SNX17-210ENST00000537606 PRB4P10163 310 aaPredicted RBP13.71□□□□□ -0.22
SNX17-210ENST00000537606 Q56UQ5 140 aa13.71□□□□□ -0.22
SNX17-210ENST00000537606 SERTAD4Q9NUC0 356 aa13.71□□□□□ -0.22
SNX17-210ENST00000537606 ANKRD17O75179 2603 aaKnown RBP13.71□□□□□ -0.22
SNX17-210ENST00000537606 PGPA6NDG6 321 aa13.7□□□□□ -0.22
SNX17-210ENST00000537606 NDUFS8O00217 210 aa13.7□□□□□ -0.22
SNX17-210ENST00000537606 ATP6V0E1O15342 81 aa13.7□□□□□ -0.22
SNX17-210ENST00000537606 IL4P05112 153 aa13.7□□□□□ -0.22
SNX17-210ENST00000537606 GP9P14770 177 aa13.7□□□□□ -0.22
SNX17-210ENST00000537606 PTPN13Q12923 2485 aa13.7□□□□□ -0.22
SNX17-210ENST00000537606 IGHV1-69DA0A0B4J2H0 117 aa13.7□□□□□ -0.22
SNX17-210ENST00000537606 GRIFINA4D1Z8 144 aa13.7□□□□□ -0.22
SNX17-210ENST00000537606 F8W735 103 aaPredicted RBP13.7□□□□□ -0.22
SNX17-210ENST00000537606 IGHV1-69P01742 117 aa13.7□□□□□ -0.22
SNX17-210ENST00000537606 IER3P46695 156 aa13.7□□□□□ -0.22
SNX17-210ENST00000537606 COA6Q5JTJ3 125 aaKnown RBP13.7□□□□□ -0.22
SNX17-210ENST00000537606 ZNF600Q6ZNG1 722 aa13.7□□□□□ -0.22
SNX17-210ENST00000537606 STXBP6Q8NFX7 210 aa13.7□□□□□ -0.22
SNX17-210ENST00000537606 CDC42EP3Q9UKI2 254 aa13.7□□□□□ -0.22
SNX17-210ENST00000537606 G3V318 75 aa13.69□□□□□ -0.22
SNX17-210ENST00000537606 HLA-DRB1P01911 266 aa13.69□□□□□ -0.22
SNX17-210ENST00000537606 SLC25A5P05141 298 aaKnown RBP13.69□□□□□ -0.22
SNX17-210ENST00000537606 COL8A1P27658 744 aa13.69□□□□□ -0.22
SNX17-210ENST00000537606 MYCNOSP40205 109 aa13.69□□□□□ -0.22
SNX17-210ENST00000537606 S100A12P80511 92 aa13.69□□□□□ -0.22
SNX17-210ENST00000537606 IBA57Q5T440 356 aaKnown RBP13.69□□□□□ -0.22
SNX17-210ENST00000537606 UNQ5815/PRO19632Q6UWF5 114 aa13.69□□□□□ -0.22
SNX17-210ENST00000537606 TMEM256Q8N2U0 113 aa13.69□□□□□ -0.22
SNX17-210ENST00000537606 ZNF491Q8N8L2 437 aa13.69□□□□□ -0.22
SNX17-210ENST00000537606 MRPL27Q9P0M9 148 aaKnown RBP13.69□□□□□ -0.22
SNX17-210ENST00000537606 CSPG4Q6UVK1 2322 aa13.69□□□□□ -0.22
SNX17-210ENST00000537606 ABCA12Q86UK0 2595 aa13.69□□□□□ -0.22
SNX17-210ENST00000537606 OR2T8A6NH00 312 aa13.69□□□□□ -0.22
SNX17-210ENST00000537606 HIST1H1BP16401 226 aaKnown RBP13.69□□□□□ -0.22
SNX17-210ENST00000537606 MFAP4P55083 255 aa13.69□□□□□ -0.22
SNX17-210ENST00000537606 BAGE2Q86Y30 109 aa13.69□□□□□ -0.22
SNX17-210ENST00000537606 C7orf69Q9H7B7 122 aa13.69□□□□□ -0.22
SNX17-210ENST00000537606 C21orf62Q9NYP8 219 aa13.69□□□□□ -0.22
SNX17-210ENST00000537606 IGHV3-35A0A0C4DH35 117 aa13.68□□□□□ -0.22
SNX17-210ENST00000537606 NUPR1O60356 82 aa13.68□□□□□ -0.22
SNX17-210ENST00000537606 PRR27Q6MZM9 219 aa13.68□□□□□ -0.22
SNX17-210ENST00000537606 BTF3L4Q96K17 158 aa13.68□□□□□ -0.22
SNX17-210ENST00000537606 OSTCQ9NRP0 149 aa13.68□□□□□ -0.22
SNX17-210ENST00000537606 FBXL7Q9UJT9 491 aa13.68□□□□□ -0.22
SNX17-210ENST00000537606 ZANQ9Y493 2812 aa13.68□□□□□ -0.22
SNX17-210ENST00000537606 COX6B1P14854 86 aa13.68□□□□□ -0.22
SNX17-210ENST00000537606 YPEL3P61236 119 aaPredicted RBP13.68□□□□□ -0.22
SNX17-210ENST00000537606 RNF125Q96EQ8 232 aa13.68□□□□□ -0.22
SNX17-210ENST00000537606 EPDR1Q9UM22 224 aa13.68□□□□□ -0.22
SNX17-210ENST00000537606 TOMM40O96008 361 aa13.67□□□□□ -0.22
SNX17-210ENST00000537606 FCGR2BP31994 310 aaPredicted RBP13.67□□□□□ -0.22
SNX17-210ENST00000537606 TAS2R60P59551 318 aa13.67□□□□□ -0.22
SNX17-210ENST00000537606 USF2Q15853 346 aaPredicted RBP13.67□□□□□ -0.22
SNX17-210ENST00000537606 MRPL18Q9H0U6 180 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms