RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 RPP25LQ8N5L8 163 aaKnown RBP11.99□□□□□ -0.49
SFSWAP-206ENST00000537582 C20orf24Q9BUV8 137 aa11.99□□□□□ -0.49
SFSWAP-206ENST00000537582 SEPSECSQ9HD40 501 aaKnown RBP11.99□□□□□ -0.49
SFSWAP-206ENST00000537582 KCNIP2Q9NS61 270 aa11.99□□□□□ -0.49
SFSWAP-206ENST00000537582 HMGB3O15347 200 aaKnown RBP11.98□□□□□ -0.49
SFSWAP-206ENST00000537582 SCGB2A1O75556 95 aa11.98□□□□□ -0.49
SFSWAP-206ENST00000537582 FABP1P07148 127 aa11.98□□□□□ -0.49
SFSWAP-206ENST00000537582 OR5G3P0C626 314 aa11.98□□□□□ -0.49
SFSWAP-206ENST00000537582 SULT1A2P50226 295 aa11.98□□□□□ -0.49
SFSWAP-206ENST00000537582 RELQ04864 619 aaPredicted RBP11.98□□□□□ -0.49
SFSWAP-206ENST00000537582 RPEL1Q2QD12 228 aa11.98□□□□□ -0.49
SFSWAP-206ENST00000537582 TMEM41BQ5BJD5 291 aa11.98□□□□□ -0.49
SFSWAP-206ENST00000537582 FAM209BQ5JX69 171 aa11.98□□□□□ -0.49
SFSWAP-206ENST00000537582 Q6ZRG5 221 aa11.98□□□□□ -0.49
SFSWAP-206ENST00000537582 OR10G4Q8NGN3 311 aa11.98□□□□□ -0.49
SFSWAP-206ENST00000537582 OR10G9Q8NGN4 311 aa11.98□□□□□ -0.49
SFSWAP-206ENST00000537582 OR10G7Q8NGN6 311 aa11.98□□□□□ -0.49
SFSWAP-206ENST00000537582 OR1N2Q8NGR9 330 aa11.98□□□□□ -0.49
SFSWAP-206ENST00000537582 FAM213BQ8TBF2 198 aa11.98□□□□□ -0.49
SFSWAP-206ENST00000537582 SLC25A22Q9H936 323 aa11.98□□□□□ -0.49
SFSWAP-206ENST00000537582 IGHV3-49A0A0A0MS15 119 aa11.97□□□□□ -0.49
SFSWAP-206ENST00000537582 TRAV5A0A0B4J249 113 aa11.97□□□□□ -0.49
SFSWAP-206ENST00000537582 ZNF320A2RRD8 509 aa11.97□□□□□ -0.49
SFSWAP-206ENST00000537582 COX7A2P2O60397 106 aa11.97□□□□□ -0.49
SFSWAP-206ENST00000537582 SYNJ2BPP57105 145 aa11.97□□□□□ -0.49
SFSWAP-206ENST00000537582 ACOT6Q3I5F7 207 aaPredicted RBP11.97□□□□□ -0.49
SFSWAP-206ENST00000537582 LEMD1Q68G75 181 aa11.97□□□□□ -0.49
SFSWAP-206ENST00000537582 MIR17HGQ75NE6 70 aa11.97□□□□□ -0.49
SFSWAP-206ENST00000537582 CITED1Q99966 193 aa11.97□□□□□ -0.49
SFSWAP-206ENST00000537582 LINC01619G3V211 115 aa11.96□□□□□ -0.49
SFSWAP-206ENST00000537582 HYPMO75409 117 aa11.96□□□□□ -0.49
SFSWAP-206ENST00000537582 APOHP02749 345 aaPredicted RBP11.96□□□□□ -0.49
SFSWAP-206ENST00000537582 PLP1P60201 277 aa11.96□□□□□ -0.49
SFSWAP-206ENST00000537582 TMEM190Q8WZ59 177 aa11.96□□□□□ -0.49
SFSWAP-206ENST00000537582 SCRT1Q9BWW7 348 aa11.96□□□□□ -0.49
SFSWAP-206ENST00000537582 DNAJC4Q9NNZ3 241 aa11.96□□□□□ -0.49
SFSWAP-206ENST00000537582 MRPL27Q9P0M9 148 aaKnown RBP11.96□□□□□ -0.49
SFSWAP-206ENST00000537582 SELENOKQ9Y6D0 94 aa11.96□□□□□ -0.49
SFSWAP-206ENST00000537582 IGHV3OR16-13A0A075B7E8 117 aa11.96□□□□□ -0.5
SFSWAP-206ENST00000537582 IGHV3-74A0A0B4J1X5 117 aa11.96□□□□□ -0.5
SFSWAP-206ENST00000537582 IGHV3-66A0A0C4DH42 116 aa11.96□□□□□ -0.5
SFSWAP-206ENST00000537582 A0A1B0GV50 99 aa11.96□□□□□ -0.5
SFSWAP-206ENST00000537582 CCL24O00175 119 aa11.96□□□□□ -0.5
SFSWAP-206ENST00000537582 NDUFA4O00483 81 aa11.96□□□□□ -0.5
SFSWAP-206ENST00000537582 TM4SF20Q53R12 229 aa11.96□□□□□ -0.5
SFSWAP-206ENST00000537582 FAM78BQ5VT40 261 aa11.96□□□□□ -0.5
SFSWAP-206ENST00000537582 C10orf113Q5VZT2 155 aa11.96□□□□□ -0.5
SFSWAP-206ENST00000537582 NDUFA11Q86Y39 141 aa11.96□□□□□ -0.5
SFSWAP-206ENST00000537582 DPF1Q92782 380 aa11.96□□□□□ -0.5
SFSWAP-206ENST00000537582 ZNF705EA8MWA4 302 aaPredicted RBP11.95□□□□□ -0.5
SFSWAP-206ENST00000537582 UMAD1C9J7I0 102 aa11.95□□□□□ -0.5
SFSWAP-206ENST00000537582 BLOC1S1P78537 153 aa11.95□□□□□ -0.5
SFSWAP-206ENST00000537582 FHL3Q13643 280 aa11.95□□□□□ -0.5
SFSWAP-206ENST00000537582 LINC00305Q7Z4B0 112 aa11.95□□□□□ -0.5
SFSWAP-206ENST00000537582 GPHB5Q86YW7 130 aa11.95□□□□□ -0.5
SFSWAP-206ENST00000537582 TMEM158Q8WZ71 300 aa11.95□□□□□ -0.5
SFSWAP-206ENST00000537582 DLX4Q92988 240 aaPredicted RBP11.95□□□□□ -0.5
SFSWAP-206ENST00000537582 HIGD1AQ9Y241 93 aa11.95□□□□□ -0.5
SFSWAP-206ENST00000537582 TMEM218A2RU14 115 aa11.94□□□□□ -0.5
SFSWAP-206ENST00000537582 FGF8P55075 233 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-206ENST00000537582 KLF5Q13887 457 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-206ENST00000537582 C10orf91Q5T1B1 145 aa11.94□□□□□ -0.5
SFSWAP-206ENST00000537582 OR1L4Q8NGR5 311 aa11.94□□□□□ -0.5
SFSWAP-206ENST00000537582 RAB24Q969Q5 203 aa11.94□□□□□ -0.5
SFSWAP-206ENST00000537582 SLC25A39Q9BZJ4 359 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-206ENST00000537582 SEC14L6B5MCN3 397 aa11.93□□□□□ -0.5
SFSWAP-206ENST00000537582 H3BRN7 92 aa11.93□□□□□ -0.5
SFSWAP-206ENST00000537582 MBP02144 154 aa11.93□□□□□ -0.5
SFSWAP-206ENST00000537582 APOC3P02656 99 aa11.93□□□□□ -0.5
SFSWAP-206ENST00000537582 CDC34P49427 236 aaPredicted RBP11.93□□□□□ -0.5
SFSWAP-206ENST00000537582 LCN15Q6UWW0 184 aa11.93□□□□□ -0.5
SFSWAP-206ENST00000537582 GATAD1Q8WUU5 269 aa11.93□□□□□ -0.5
SFSWAP-206ENST00000537582 PFDN5Q99471 154 aa11.93□□□□□ -0.5
SFSWAP-206ENST00000537582 RABAC1Q9UI14 185 aa11.93□□□□□ -0.5
SFSWAP-206ENST00000537582 FUT9Q9Y231 359 aa11.93□□□□□ -0.5
SFSWAP-206ENST00000537582 ELOA3CA0A087WX78 387 aaPredicted RBP11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 A0A1W2PPV4 95 aa11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 TMEM213A2RRL7 107 aa11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 SNRPCP09234 159 aaKnown RBP11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 FAM106AQ4KMX7 169 aa11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 PXDC1Q5TGL8 231 aa11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 C1QL4Q86Z23 238 aa11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 SPATA3Q8NHX4 192 aa11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 FAM167A-AS1Q96KT0 104 aa11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 SHANK2-AS3Q9BTD1 123 aa11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 SLC25A2Q9BXI2 301 aa11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 ACTR3CQ9C0K3 210 aaPredicted RBP11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 CARHSP1Q9Y2V2 147 aaKnown RBP11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 RAB5CP51148 216 aa11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 RHOBP62745 196 aa11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 REC114Q7Z4M0 266 aa11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 LYPD6BQ8NI32 183 aa11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 ZNF503Q96F45 646 aa11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 METTL26Q96S19 204 aa11.92□□□□□ -0.5
SFSWAP-206ENST00000537582 COL6A5A8TX70 2615 aa11.91□□□□□ -0.5
SFSWAP-206ENST00000537582 CTXND1A0A1B0GTU2 59 aa11.91□□□□□ -0.5
SFSWAP-206ENST00000537582 LOC105371267A0A1B0GV96 52 aa11.91□□□□□ -0.5
SFSWAP-206ENST00000537582 ZNF98A6NK75 572 aa11.91□□□□□ -0.5
SFSWAP-206ENST00000537582 NPPCP23582 126 aa11.91□□□□□ -0.5
SFSWAP-206ENST00000537582 CRYBB3P26998 211 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms