RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 IGLV2-8P01709 118 aa8.87□□□□□ -0.99
CLSTN3-207ENST00000537408 LYRM7Q5U5X0 104 aa8.87□□□□□ -0.99
CLSTN3-207ENST00000537408 Q8N7P7 452 aa8.87□□□□□ -0.99
CLSTN3-207ENST00000537408 A0A1B0GXF2 115 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 CD3EP07766 207 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 FXYD2P54710 66 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 EDDM3AQ14507 147 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 C5orf47Q569G3 176 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 MAP1LC3AQ9H492 121 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 INSIG2Q9Y5U4 225 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 PRSS29PA6NIE9 313 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 FABP5P3A8MUU1 101 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 SNCGO76070 127 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 WDR31Q8NA23 367 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 PGLYRP4Q96LB8 373 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 CDIP1Q9H305 208 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 DNPH1O43598 174 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 P01737 135 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 THBDP07204 575 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 XGP55808 180 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 CACNG7P62955 275 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 FOXE3Q13461 319 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 PPDPFLQ8WWR9 84 aa8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 RPP21Q9H633 154 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 AMMECR1Q9Y4X0 333 aaPredicted RBP8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 CHCHD2Q9Y6H1 151 aaPredicted RBP8.86□□□□□ -0.99
CLSTN3-207ENST00000537408 INSL3P51460 131 aa8.85□□□□□ -0.99
CLSTN3-207ENST00000537408 ZNF138P52744 262 aa8.85□□□□□ -0.99
CLSTN3-207ENST00000537408 UBE2L3P68036 154 aaKnown RBP8.85□□□□□ -0.99
CLSTN3-207ENST00000537408 ZNF146Q15072 292 aa8.85□□□□□ -0.99
CLSTN3-207ENST00000537408 RSPO1Q2MKA7 263 aaPredicted RBP8.85□□□□□ -0.99
CLSTN3-207ENST00000537408 TM2D2Q9BX73 214 aa8.85□□□□□ -0.99
CLSTN3-207ENST00000537408 SPRY4Q9C004 299 aa8.85□□□□□ -0.99
CLSTN3-207ENST00000537408 CRYGSP22914 178 aa8.85□□□□□ -0.99
CLSTN3-207ENST00000537408 FAM27BQ5VT28 67 aa8.85□□□□□ -0.99
CLSTN3-207ENST00000537408 RPRMLQ8N4K4 120 aa8.85□□□□□ -0.99
CLSTN3-207ENST00000537408 C8orf46Q8TAG6 207 aa8.85□□□□□ -0.99
CLSTN3-207ENST00000537408 FAM234AQ9H0X4 552 aa8.85□□□□□ -0.99
CLSTN3-207ENST00000537408 LYZL6O75951 148 aa8.85□□□□□ -0.99
CLSTN3-207ENST00000537408 BRI3O95415 125 aa8.85□□□□□ -0.99
CLSTN3-207ENST00000537408 RPL30P62888 115 aaKnown RBP8.85□□□□□ -0.99
CLSTN3-207ENST00000537408 AKAP6Q13023 2319 aa8.85□□□□□ -0.99
CLSTN3-207ENST00000537408 RBPMS2Q6ZRY4 209 aaKnown RBP8.85□□□□□ -0.99
CLSTN3-207ENST00000537408 M0R1B8 84 aa8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 SPINT2O43291 252 aa8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 Q6AWC8 147 aa8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 AMTNQ6UX39 209 aa8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 CEND1Q8N111 149 aa8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 NABP2Q9BQ15 211 aa8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 SRSF8Q9BRL6 282 aaKnown RBP8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 MKI67P46013 3256 aaKnown RBP8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 PCNX1Q96RV3 2341 aa8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 TCRBV4S1A1TA0A5B7 111 aa8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 GGTLC3B5MD39 225 aa8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 FCN3O75636 299 aa8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 CEACAM4O75871 244 aa8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 IGLV2-14P01704 120 aa8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 FCER1GP30273 86 aa8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 Q6ZR03 302 aa8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 PCP2Q8IVA1 136 aa8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 UBALD1Q8TB05 177 aa8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 NABP1Q96AH0 204 aa8.84□□□□□ -0.99
CLSTN3-207ENST00000537408 NPIPB5A8MRT5 1133 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 PEX7O00628 323 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 NCR2O95944 276 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 C8orf88P0DMB2 117 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 IFITM1P13164 125 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 CFHR2P36980 270 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 NPIPB6E9PJ23 425 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 SYNGR3O43761 229 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 RFPL3SP0C7P2 107 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 PRR31Q5SQ13 230 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 C20orf204Q6ZNR8 217 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 DDB2Q92466 427 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 ZFYVE26Q68DK2 2539 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 FNDC10F2Z333 226 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 P0C879 139 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 DLX4Q92988 240 aaPredicted RBP8.83□□□□□ -1
CLSTN3-207ENST00000537408 UBTD1Q9HAC8 227 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 RIGQ13278 110 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 FAM214BQ7L5A3 538 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 OR9G1Q8NH87 305 aa8.83□□□□□ -1
CLSTN3-207ENST00000537408 C17orf98A8MV24 154 aa8.82□□□□□ -1
CLSTN3-207ENST00000537408 MGST3O14880 152 aa8.82□□□□□ -1
CLSTN3-207ENST00000537408 SLC25A5P05141 298 aaKnown RBP8.82□□□□□ -1
CLSTN3-207ENST00000537408 RRN3P1Q2M238 152 aa8.82□□□□□ -1
CLSTN3-207ENST00000537408 PRR30Q53SZ7 412 aaPredicted RBP8.82□□□□□ -1
CLSTN3-207ENST00000537408 CT83Q5H943 113 aa8.82□□□□□ -1
CLSTN3-207ENST00000537408 MDS2Q8NDY4 140 aa8.82□□□□□ -1
CLSTN3-207ENST00000537408 RNASE6Q93091 150 aaKnown RBP8.82□□□□□ -1
CLSTN3-207ENST00000537408 TMEM126AQ9H061 195 aa8.82□□□□□ -1
CLSTN3-207ENST00000537408 KIAA1549Q9HCM3 1950 aa8.82□□□□□ -1
CLSTN3-207ENST00000537408 CD24P25063 80 aa8.82□□□□□ -1
CLSTN3-207ENST00000537408 NDUFV3P56181 108 aaKnown RBP8.82□□□□□ -1
CLSTN3-207ENST00000537408 ZGRF1Q86YA3 2104 aa8.82□□□□□ -1
CLSTN3-207ENST00000537408 IL4P05112 153 aa8.82□□□□□ -1
CLSTN3-207ENST00000537408 Q0VFX4 171 aa8.82□□□□□ -1
CLSTN3-207ENST00000537408 TAL2Q16559 108 aa8.82□□□□□ -1
CLSTN3-207ENST00000537408 FAM169BQ8N8A8 192 aa8.82□□□□□ -1
CLSTN3-207ENST00000537408 GFRA4Q9GZZ7 299 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms