RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 TGOLN2O43493 480 aa17.74■□□□□ 0.43
HMGA2-206ENST00000536545 IGHV3-23P01764 117 aa17.74■□□□□ 0.43
HMGA2-206ENST00000536545 C19orf54Q5BKX5 351 aa17.74■□□□□ 0.43
HMGA2-206ENST00000536545 IMMP2LQ96T52 175 aa17.74■□□□□ 0.43
HMGA2-206ENST00000536545 BEX4Q9NWD9 120 aaPredicted RBP17.74■□□□□ 0.43
HMGA2-206ENST00000536545 CDC42EP3Q9UKI2 254 aa17.74■□□□□ 0.43
HMGA2-206ENST00000536545 CENPEQ02224 2701 aa17.74■□□□□ 0.43
HMGA2-206ENST00000536545 G3V318 75 aa17.74■□□□□ 0.43
HMGA2-206ENST00000536545 CRIP2P52943 208 aaPredicted RBP17.74■□□□□ 0.43
HMGA2-206ENST00000536545 RANP62826 216 aaKnown RBP17.74■□□□□ 0.43
HMGA2-206ENST00000536545 USF2Q15853 346 aaPredicted RBP17.74■□□□□ 0.43
HMGA2-206ENST00000536545 OR10G8Q8NGN5 311 aa17.74■□□□□ 0.43
HMGA2-206ENST00000536545 MAP1AP78559 2803 aaPredicted RBP17.73■□□□□ 0.43
HMGA2-206ENST00000536545 A6NDX4 124 aa17.73■□□□□ 0.43
HMGA2-206ENST00000536545 IGLV2-8P01709 118 aa17.73■□□□□ 0.43
HMGA2-206ENST00000536545 TAS2R60P59551 318 aa17.73■□□□□ 0.43
HMGA2-206ENST00000536545 ZNF502Q8TBZ5 544 aa17.73■□□□□ 0.43
HMGA2-206ENST00000536545 CSMD1Q96PZ7 3565 aa17.73■□□□□ 0.43
HMGA2-206ENST00000536545 OR2T8A6NH00 312 aa17.72■□□□□ 0.43
HMGA2-206ENST00000536545 CNN1P51911 297 aaKnown RBP17.72■□□□□ 0.43
HMGA2-206ENST00000536545 RHOGP84095 191 aa17.72■□□□□ 0.43
HMGA2-206ENST00000536545 C15orf32Q32M92 178 aa17.72■□□□□ 0.43
HMGA2-206ENST00000536545 KCNIP4Q6PIL6 250 aa17.72■□□□□ 0.43
HMGA2-206ENST00000536545 CELSR1Q9NYQ6 3014 aa17.72■□□□□ 0.43
HMGA2-206ENST00000536545 A0A1W2PPQ1 181 aa17.71■□□□□ 0.43
HMGA2-206ENST00000536545 C5orf52A6NGY3 159 aa17.71■□□□□ 0.43
HMGA2-206ENST00000536545 H3BUX3 64 aa17.71■□□□□ 0.43
HMGA2-206ENST00000536545 SCGB2A1O75556 95 aa17.71■□□□□ 0.43
HMGA2-206ENST00000536545 CTSGP08311 255 aa17.71■□□□□ 0.43
HMGA2-206ENST00000536545 HIST1H1EP10412 219 aaKnown RBP17.71■□□□□ 0.43
HMGA2-206ENST00000536545 GNG5P63218 68 aa17.71■□□□□ 0.43
HMGA2-206ENST00000536545 SRD5A3Q9H8P0 318 aa17.71■□□□□ 0.43
HMGA2-206ENST00000536545 ZNF586Q9NXT0 402 aa17.71■□□□□ 0.43
HMGA2-206ENST00000536545 KMT2BQ9UMN6 2715 aaPredicted RBP17.71■□□□□ 0.43
HMGA2-206ENST00000536545 PHOX2AO14813 284 aa17.71■□□□□ 0.43
HMGA2-206ENST00000536545 TRGC2P03986 189 aa17.71■□□□□ 0.43
HMGA2-206ENST00000536545 LOXL1Q08397 574 aaPredicted RBP17.71■□□□□ 0.43
HMGA2-206ENST00000536545 DEFB113Q30KQ7 82 aa17.71■□□□□ 0.43
HMGA2-206ENST00000536545 SMUG1Q53HV7 270 aa17.71■□□□□ 0.43
HMGA2-206ENST00000536545 ZNF414Q96IQ9 312 aa17.71■□□□□ 0.43
HMGA2-206ENST00000536545 LINC00479Q96M42 142 aa17.71■□□□□ 0.43
HMGA2-206ENST00000536545 Q9H3A6 140 aa17.71■□□□□ 0.43
HMGA2-206ENST00000536545 EPDR1Q9UM22 224 aa17.71■□□□□ 0.43
HMGA2-206ENST00000536545 H3BTX0 84 aa17.7■□□□□ 0.42
HMGA2-206ENST00000536545 J3QLI3 93 aa17.7■□□□□ 0.42
HMGA2-206ENST00000536545 MRPS12O15235 138 aaKnown RBP17.7■□□□□ 0.42
HMGA2-206ENST00000536545 GCGP01275 180 aa17.7■□□□□ 0.42
HMGA2-206ENST00000536545 TYMSP04818 313 aa17.7■□□□□ 0.42
HMGA2-206ENST00000536545 SLC25A5P05141 298 aaKnown RBP17.7■□□□□ 0.42
HMGA2-206ENST00000536545 ADMP35318 185 aa17.7■□□□□ 0.42
HMGA2-206ENST00000536545 SNRPEP62304 92 aaKnown RBP17.7■□□□□ 0.42
HMGA2-206ENST00000536545 OR5I1Q13606 314 aa17.7■□□□□ 0.42
HMGA2-206ENST00000536545 LRRC75A-AS1Q8N1F1 130 aa17.7■□□□□ 0.42
HMGA2-206ENST00000536545 CHRDL1Q9BU40 450 aa17.7■□□□□ 0.42
HMGA2-206ENST00000536545 CHD6Q8TD26 2715 aa17.7■□□□□ 0.42
HMGA2-206ENST00000536545 PGPA6NDG6 321 aa17.69■□□□□ 0.42
HMGA2-206ENST00000536545 S100A6P06703 90 aa17.69■□□□□ 0.42
HMGA2-206ENST00000536545 IGLC2P0DOY2 106 aa17.69■□□□□ 0.42
HMGA2-206ENST00000536545 FOXL1Q12952 345 aa17.69■□□□□ 0.42
HMGA2-206ENST00000536545 BPIFA4PQ86YQ2 179 aa17.69■□□□□ 0.42
HMGA2-206ENST00000536545 BCL6BQ8N143 479 aaPredicted RBP17.69■□□□□ 0.42
HMGA2-206ENST00000536545 C5orf17Q8NAS9 161 aa17.69■□□□□ 0.42
HMGA2-206ENST00000536545 CSMD2Q7Z408 3487 aa17.69■□□□□ 0.42
HMGA2-206ENST00000536545 TRAV41A0A0B4J266 112 aa17.68■□□□□ 0.42
HMGA2-206ENST00000536545 LY6EQ16553 131 aa17.68■□□□□ 0.42
HMGA2-206ENST00000536545 S100A7AQ86SG5 101 aa17.68■□□□□ 0.42
HMGA2-206ENST00000536545 OTORQ9NRC9 128 aa17.68■□□□□ 0.42
HMGA2-206ENST00000536545 ABCA12Q86UK0 2595 aa17.68■□□□□ 0.42
HMGA2-206ENST00000536545 ZNF98A6NK75 572 aa17.68■□□□□ 0.42
HMGA2-206ENST00000536545 TMEM183BQ1AE95 376 aa17.68■□□□□ 0.42
HMGA2-206ENST00000536545 CCDC140Q96MF4 163 aa17.68■□□□□ 0.42
HMGA2-206ENST00000536545 ATG101Q9BSB4 218 aa17.68■□□□□ 0.42
HMGA2-206ENST00000536545 NAV2Q8IVL1 2488 aa17.67■□□□□ 0.42
HMGA2-206ENST00000536545 PPP5D1E7EU14 171 aa17.67■□□□□ 0.42
HMGA2-206ENST00000536545 UBE2CO00762 179 aa17.67■□□□□ 0.42
HMGA2-206ENST00000536545 ISLRO14498 428 aa17.67■□□□□ 0.42
HMGA2-206ENST00000536545 GPR183P32249 361 aa17.67■□□□□ 0.42
HMGA2-206ENST00000536545 FAM3BP58499 235 aaPredicted RBP17.67■□□□□ 0.42
HMGA2-206ENST00000536545 MAPK1IP1LQ8NDC0 245 aa17.67■□□□□ 0.42
HMGA2-206ENST00000536545 TMEM190Q8WZ59 177 aa17.67■□□□□ 0.42
HMGA2-206ENST00000536545 KLF12Q9Y4X4 402 aa17.67■□□□□ 0.42
HMGA2-206ENST00000536545 V9GYV3 84 aa17.67■□□□□ 0.42
HMGA2-206ENST00000536545 TRBV19A0A075B6N1 114 aa17.66■□□□□ 0.42
HMGA2-206ENST00000536545 TRAV34A0A0B4J273 112 aa17.66■□□□□ 0.42
HMGA2-206ENST00000536545 RNF223E7ERA6 249 aa17.66■□□□□ 0.42
HMGA2-206ENST00000536545 AP4M1O00189 453 aa17.66■□□□□ 0.42
HMGA2-206ENST00000536545 HIST1H2BKO60814 126 aa17.66■□□□□ 0.42
HMGA2-206ENST00000536545 HIST1H2BJP06899 126 aa17.66■□□□□ 0.42
HMGA2-206ENST00000536545 HIST1H2BOP23527 126 aa17.66■□□□□ 0.42
HMGA2-206ENST00000536545 HIST1H2BBP33778 126 aa17.66■□□□□ 0.42
HMGA2-206ENST00000536545 HIST1H2BDP58876 126 aa17.66■□□□□ 0.42
HMGA2-206ENST00000536545 ERVFC1-1P60608 527 aa17.66■□□□□ 0.42
HMGA2-206ENST00000536545 HIST1H2BCP62807 126 aa17.66■□□□□ 0.42
HMGA2-206ENST00000536545 HIST2H2BEQ16778 126 aa17.66■□□□□ 0.42
HMGA2-206ENST00000536545 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.66■□□□□ 0.42
HMGA2-206ENST00000536545 OR4F17Q8NGA8 305 aa17.66■□□□□ 0.42
HMGA2-206ENST00000536545 HIST1H2BHQ93079 126 aa17.66■□□□□ 0.42
HMGA2-206ENST00000536545 HIST1H2BNQ99877 126 aa17.66■□□□□ 0.42
HMGA2-206ENST00000536545 HIST1H2BMQ99879 126 aa17.66■□□□□ 0.42
HMGA2-206ENST00000536545 OSTCQ9NRP0 149 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms