RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 LRRK2Q5S007 2527 aa17.24■□□□□ 0.35
TRIM3-214ENST00000536344 H0Y8G0 127 aa17.24■□□□□ 0.35
TRIM3-214ENST00000536344 NDUFS7O75251 213 aa17.24■□□□□ 0.35
TRIM3-214ENST00000536344 PMCHL2Q9BQD1 86 aa17.24■□□□□ 0.35
TRIM3-214ENST00000536344 RPUSD1Q9UJJ7 312 aaKnown RBP17.24■□□□□ 0.35
TRIM3-214ENST00000536344 LINC00312Q9Y6C7 94 aa17.24■□□□□ 0.35
TRIM3-214ENST00000536344 ZFHX3Q15911 3703 aa17.24■□□□□ 0.35
TRIM3-214ENST00000536344 GGTLC3B5MD39 225 aa17.23■□□□□ 0.35
TRIM3-214ENST00000536344 CORTO00230 105 aa17.23■□□□□ 0.35
TRIM3-214ENST00000536344 NAA38Q9BRA0 125 aaKnown RBP17.23■□□□□ 0.35
TRIM3-214ENST00000536344 IGKV1-16P04430 117 aa17.22■□□□□ 0.35
TRIM3-214ENST00000536344 IGFBP2P18065 325 aa17.22■□□□□ 0.35
TRIM3-214ENST00000536344 TMEM70Q9BUB7 260 aa17.22■□□□□ 0.35
TRIM3-214ENST00000536344 IZUMO1RA6ND01 250 aa17.22■□□□□ 0.35
TRIM3-214ENST00000536344 MPDU1O75352 247 aa17.22■□□□□ 0.35
TRIM3-214ENST00000536344 TOX4O94842 621 aa17.22■□□□□ 0.35
TRIM3-214ENST00000536344 FAM120AOSQ5T036 256 aa17.22■□□□□ 0.35
TRIM3-214ENST00000536344 LHFPL4Q7Z7J7 247 aa17.22■□□□□ 0.35
TRIM3-214ENST00000536344 ZNF503Q96F45 646 aa17.22■□□□□ 0.35
TRIM3-214ENST00000536344 ZNF430Q9H8G1 570 aaPredicted RBP17.22■□□□□ 0.35
TRIM3-214ENST00000536344 LSM4Q9Y4Z0 139 aaKnown RBP17.22■□□□□ 0.35
TRIM3-214ENST00000536344 TNFRSF13BO14836 293 aaPredicted RBP17.21■□□□□ 0.35
TRIM3-214ENST00000536344 PRB1P04280 392 aa17.21■□□□□ 0.35
TRIM3-214ENST00000536344 FOXA3P55318 350 aaPredicted RBP17.21■□□□□ 0.35
TRIM3-214ENST00000536344 MOB3BQ86TA1 216 aa17.21■□□□□ 0.35
TRIM3-214ENST00000536344 ISLRO14498 428 aa17.21■□□□□ 0.35
TRIM3-214ENST00000536344 ITLN2Q8WWU7 325 aaPredicted RBP17.21■□□□□ 0.35
TRIM3-214ENST00000536344 CIDEAO60543 219 aa17.2■□□□□ 0.34
TRIM3-214ENST00000536344 AREGP15514 252 aa17.2■□□□□ 0.34
TRIM3-214ENST00000536344 SLC25A34Q6PIV7 304 aa17.2■□□□□ 0.34
TRIM3-214ENST00000536344 FNDC4Q9H6D8 234 aaPredicted RBP17.2■□□□□ 0.34
TRIM3-214ENST00000536344 VWC2LB2RUY7 222 aa17.2■□□□□ 0.34
TRIM3-214ENST00000536344 RPS20P60866 119 aaKnown RBP17.2■□□□□ 0.34
TRIM3-214ENST00000536344 FAM71F2Q6NXP2 309 aa17.2■□□□□ 0.34
TRIM3-214ENST00000536344 NUP35Q8NFH5 326 aa17.2■□□□□ 0.34
TRIM3-214ENST00000536344 HINT2Q9BX68 163 aa17.2■□□□□ 0.34
TRIM3-214ENST00000536344 TMEM140Q9NV12 185 aa17.2■□□□□ 0.34
TRIM3-214ENST00000536344 NBEAP1P0C6P0 100 aa17.19■□□□□ 0.34
TRIM3-214ENST00000536344 VDAC2P45880 294 aaPredicted RBP17.19■□□□□ 0.34
TRIM3-214ENST00000536344 IGFBPL1Q8WX77 278 aa17.19■□□□□ 0.34
TRIM3-214ENST00000536344 SMIM12Q96EX1 92 aa17.19■□□□□ 0.34
TRIM3-214ENST00000536344 NPVFQ9HCQ7 196 aa17.19■□□□□ 0.34
TRIM3-214ENST00000536344 TIMM8BQ9Y5J9 83 aaPredicted RBP17.19■□□□□ 0.34
TRIM3-214ENST00000536344 OR7C2O60412 319 aa17.19■□□□□ 0.34
TRIM3-214ENST00000536344 IGLC1P0CG04 106 aa17.19■□□□□ 0.34
TRIM3-214ENST00000536344 CT45A6P0DMU7 189 aa17.19■□□□□ 0.34
TRIM3-214ENST00000536344 CT45A5P0DMU8 189 aa17.19■□□□□ 0.34
TRIM3-214ENST00000536344 CT45A7P0DMV0 189 aa17.19■□□□□ 0.34
TRIM3-214ENST00000536344 SLC25A48Q6ZT89 311 aaKnown RBP17.19■□□□□ 0.34
TRIM3-214ENST00000536344 DDB2Q92466 427 aa17.19■□□□□ 0.34
TRIM3-214ENST00000536344 UBTD1Q9HAC8 227 aa17.19■□□□□ 0.34
TRIM3-214ENST00000536344 OR4A16Q8NH70 328 aa17.18■□□□□ 0.34
TRIM3-214ENST00000536344 MRPL20Q9BYC9 149 aaKnown RBP17.18■□□□□ 0.34
TRIM3-214ENST00000536344 MT-CO2P00403 227 aa17.18■□□□□ 0.34
TRIM3-214ENST00000536344 TEPPQ6URK8 271 aa17.18■□□□□ 0.34
TRIM3-214ENST00000536344 S100A7AQ86SG5 101 aa17.18■□□□□ 0.34
TRIM3-214ENST00000536344 FER1L6-AS1Q8NA97 138 aa17.18■□□□□ 0.34
TRIM3-214ENST00000536344 IGF2BP2-AS1Q96M15 143 aa17.18■□□□□ 0.34
TRIM3-214ENST00000536344 DOPEY1Q5JWR5 2465 aa17.18■□□□□ 0.34
TRIM3-214ENST00000536344 NAV3Q8IVL0 2385 aa17.18■□□□□ 0.34
TRIM3-214ENST00000536344 COX19Q49B96 90 aa17.17■□□□□ 0.34
TRIM3-214ENST00000536344 OR1B1Q8NGR6 318 aa17.17■□□□□ 0.34
TRIM3-214ENST00000536344 OR10X1Q8NGY0 326 aa17.17■□□□□ 0.34
TRIM3-214ENST00000536344 ABCA1O95477 2261 aa17.17■□□□□ 0.34
TRIM3-214ENST00000536344 POLQO75417 2590 aa17.17■□□□□ 0.34
TRIM3-214ENST00000536344 IGHV3-72A0A0B4J1Y9 119 aa17.17■□□□□ 0.34
TRIM3-214ENST00000536344 SRRM4A7MD48 611 aaKnown RBP17.17■□□□□ 0.34
TRIM3-214ENST00000536344 SYS1-DBNDD2H3BUS1 97 aa17.17■□□□□ 0.34
TRIM3-214ENST00000536344 ERVK-16P61578 105 aa17.17■□□□□ 0.34
TRIM3-214ENST00000536344 COMMD5Q9GZQ3 224 aa17.17■□□□□ 0.34
TRIM3-214ENST00000536344 ST20Q9HBF5 79 aa17.17■□□□□ 0.34
TRIM3-214ENST00000536344 FAM231BA6NCW3 169 aa17.16■□□□□ 0.34
TRIM3-214ENST00000536344 ZNF138P52744 262 aa17.16■□□□□ 0.34
TRIM3-214ENST00000536344 SGK494Q96LW2 274 aa17.16■□□□□ 0.34
TRIM3-214ENST00000536344 CHRDL1Q9BU40 450 aa17.16■□□□□ 0.34
TRIM3-214ENST00000536344 C7orf71A4D174 169 aa17.15■□□□□ 0.34
TRIM3-214ENST00000536344 HSBP1L1C9JCN9 74 aa17.15■□□□□ 0.34
TRIM3-214ENST00000536344 PPOXP50336 477 aa17.15■□□□□ 0.34
TRIM3-214ENST00000536344 MEF2CQ06413 473 aaPredicted RBP17.15■□□□□ 0.34
TRIM3-214ENST00000536344 OR4S2Q8NH73 311 aa17.15■□□□□ 0.34
TRIM3-214ENST00000536344 RAB9BQ9NP90 201 aa17.15■□□□□ 0.34
TRIM3-214ENST00000536344 IGHV1-24A0A0C4DH33 117 aa17.15■□□□□ 0.34
TRIM3-214ENST00000536344 CD5LO43866 347 aa17.15■□□□□ 0.34
TRIM3-214ENST00000536344 C12orf54Q6X4T0 127 aa17.15■□□□□ 0.34
TRIM3-214ENST00000536344 SCRT2Q9NQ03 307 aa17.15■□□□□ 0.34
TRIM3-214ENST00000536344 GAGE10A6NGK3 116 aa17.14■□□□□ 0.33
TRIM3-214ENST00000536344 LINC00574Q9H8X3 128 aa17.14■□□□□ 0.33
TRIM3-214ENST00000536344 PLEKHA3Q9HB20 300 aa17.14■□□□□ 0.33
TRIM3-214ENST00000536344 COX7A1P24310 79 aa17.14■□□□□ 0.33
TRIM3-214ENST00000536344 KLF5Q13887 457 aaPredicted RBP17.14■□□□□ 0.33
TRIM3-214ENST00000536344 MORN5Q5VZ52 161 aa17.14■□□□□ 0.33
TRIM3-214ENST00000536344 NABP2Q9BQ15 211 aa17.14■□□□□ 0.33
TRIM3-214ENST00000536344 RAB1BQ9H0U4 201 aa17.14■□□□□ 0.33
TRIM3-214ENST00000536344 PRR20EP86478 221 aa17.13■□□□□ 0.33
TRIM3-214ENST00000536344 PRR20CP86479 221 aa17.13■□□□□ 0.33
TRIM3-214ENST00000536344 PRR20DP86480 221 aa17.13■□□□□ 0.33
TRIM3-214ENST00000536344 PRR20BP86481 221 aa17.13■□□□□ 0.33
TRIM3-214ENST00000536344 PRR20AP86496 221 aa17.13■□□□□ 0.33
TRIM3-214ENST00000536344 JMJD8Q96S16 334 aa17.13■□□□□ 0.33
TRIM3-214ENST00000536344 IGKV1OR2-108A0A075B7D4 117 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms