RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 MLANAQ16655 118 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 LINC01545Q5VT33 79 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 C9orf135Q5VTT2 229 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.01□□□□□ -1.93
MCF2-210ENST00000536274 Q8TCH9 128 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 RND1Q92730 232 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.01□□□□□ -1.93
MCF2-210ENST00000536274 IDI2-AS1Q9NZ38 188 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 NPIPB6E9PJ23 425 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 IGHV3-48P01763 117 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 CFIP05156 583 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 CT45A10P0DMU9 189 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 KLF5Q13887 457 aaPredicted RBP3.01□□□□□ -1.93
MCF2-210ENST00000536274 EFNB3Q15768 340 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 ADIPOQQ15848 244 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 SPATA46Q5T0L3 261 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 MOB1BQ7L9L4 216 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 GTSCR1Q86UQ5 136 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 ZADH2Q8N4Q0 377 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 FLVCR1-AS1Q8TAF5 88 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 BBC3Q96PG8 261 aaPredicted RBP3.01□□□□□ -1.93
MCF2-210ENST00000536274 ZNF747Q9BV97 191 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 TPPP3Q9BW30 176 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 EDA2RQ9HAV5 297 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 FGF22Q9HCT0 170 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 PRTFDC1Q9NRG1 225 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 DUSP13Q9UII6 198 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 TIMM9Q9Y5J7 89 aa3.01□□□□□ -1.93
MCF2-210ENST00000536274 MAP1BP46821 2468 aaKnown RBP3.01□□□□□ -1.93
MCF2-210ENST00000536274 LOC107984156A0A0G2JMH3 177 aa3□□□□□ -1.93
MCF2-210ENST00000536274 C15orf62A8K5M9 175 aa3□□□□□ -1.93
MCF2-210ENST00000536274 C17orf98A8MV24 154 aa3□□□□□ -1.93
MCF2-210ENST00000536274 PATE3B3GLJ2 98 aa3□□□□□ -1.93
MCF2-210ENST00000536274 E9PLD3 99 aa3□□□□□ -1.93
MCF2-210ENST00000536274 M0R135 149 aa3□□□□□ -1.93
MCF2-210ENST00000536274 PLAUP00749 431 aa3□□□□□ -1.93
MCF2-210ENST00000536274 IFI27P40305 119 aaPredicted RBP3□□□□□ -1.93
MCF2-210ENST00000536274 KLRD1Q13241 179 aa3□□□□□ -1.93
MCF2-210ENST00000536274 C1orf61Q13536 156 aa3□□□□□ -1.93
MCF2-210ENST00000536274 ZNF474Q6S9Z5 364 aaPredicted RBP3□□□□□ -1.93
MCF2-210ENST00000536274 PET117Q6UWS5 81 aa3□□□□□ -1.93
MCF2-210ENST00000536274 ARL17AQ8IVW1 177 aa3□□□□□ -1.93
MCF2-210ENST00000536274 ZNF503Q96F45 646 aa3□□□□□ -1.93
MCF2-210ENST00000536274 ZNF799Q96GE5 643 aa3□□□□□ -1.93
MCF2-210ENST00000536274 ABHD14BQ96IU4 210 aa3□□□□□ -1.93
MCF2-210ENST00000536274 CHAC1Q9BUX1 264 aa3□□□□□ -1.93
MCF2-210ENST00000536274 PRRG4Q9BZD6 226 aa3□□□□□ -1.93
MCF2-210ENST00000536274 VCX2Q9H322 139 aa3□□□□□ -1.93
MCF2-210ENST00000536274 ONECUT1Q9UBC0 465 aa3□□□□□ -1.93
MCF2-210ENST00000536274 POLDIP2Q9Y2S7 368 aa3□□□□□ -1.93
MCF2-210ENST00000536274 URB1O60287 2271 aaKnown RBP3□□□□□ -1.93
MCF2-210ENST00000536274 ACACBO00763 2458 aa3□□□□□ -1.93
MCF2-210ENST00000536274 BAHCC1Q9P281 2608 aa3□□□□□ -1.93
MCF2-210ENST00000536274 TRAV9-1A0A075B6T8 112 aa3□□□□□ -1.93
MCF2-210ENST00000536274 A0A096LNJ9 63 aa3□□□□□ -1.93
MCF2-210ENST00000536274 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3□□□□□ -1.93
MCF2-210ENST00000536274 TRAV3A0A0B4J244 114 aa3□□□□□ -1.93
MCF2-210ENST00000536274 TCRBV4S1A1TA0A5B7 111 aa3□□□□□ -1.93
MCF2-210ENST00000536274 DEFB108AA8MXU0 73 aa3□□□□□ -1.93
MCF2-210ENST00000536274 OOSP1A8MZH6 123 aa3□□□□□ -1.93
MCF2-210ENST00000536274 TMEM150CB9EJG8 249 aa3□□□□□ -1.93
MCF2-210ENST00000536274 IGHV4-34P06331 123 aa3□□□□□ -1.93
MCF2-210ENST00000536274 PYYP10082 97 aa3□□□□□ -1.93
MCF2-210ENST00000536274 CCL1P22362 96 aa3□□□□□ -1.93
MCF2-210ENST00000536274 MAPKAPK5-AS1Q8N8E1 139 aa3□□□□□ -1.93
MCF2-210ENST00000536274 C10orf35Q96D05 121 aa3□□□□□ -1.93
MCF2-210ENST00000536274 MMABQ96EY8 250 aaPredicted RBP3□□□□□ -1.93
MCF2-210ENST00000536274 PRDM14Q9GZV8 571 aa3□□□□□ -1.93
MCF2-210ENST00000536274 OSTCQ9NRP0 149 aa3□□□□□ -1.93
MCF2-210ENST00000536274 FER1L5A0AVI2 2057 aa3□□□□□ -1.93
MCF2-210ENST00000536274 DOCK10Q96BY6 2186 aa3□□□□□ -1.93
MCF2-210ENST00000536274 IGHV3-43A0A0B4J1X8 118 aa3□□□□□ -1.93
MCF2-210ENST00000536274 TRAV25A0A0B4J276 109 aa3□□□□□ -1.93
MCF2-210ENST00000536274 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3□□□□□ -1.93
MCF2-210ENST00000536274 TEX50A0A1B0GTY4 177 aa3□□□□□ -1.93
MCF2-210ENST00000536274 SMIM9A6NGZ8 99 aa3□□□□□ -1.93
MCF2-210ENST00000536274 SMKR1H3BMG3 65 aa3□□□□□ -1.93
MCF2-210ENST00000536274 FAM229AH3BQW9 127 aa3□□□□□ -1.93
MCF2-210ENST00000536274 NTN3O00634 580 aaPredicted RBP3□□□□□ -1.93
MCF2-210ENST00000536274 IGHV3-43DP0DP04 118 aa3□□□□□ -1.93
MCF2-210ENST00000536274 BRWD1-AS2P59051 145 aa3□□□□□ -1.93
MCF2-210ENST00000536274 YPEL5P62699 121 aa3□□□□□ -1.93
MCF2-210ENST00000536274 C5orf47Q569G3 176 aa3□□□□□ -1.93
MCF2-210ENST00000536274 TTC32Q5I0X7 151 aa3□□□□□ -1.93
MCF2-210ENST00000536274 DRAM1Q8N682 238 aa3□□□□□ -1.93
MCF2-210ENST00000536274 DLX4Q92988 240 aaPredicted RBP3□□□□□ -1.93
MCF2-210ENST00000536274 SPXQ9BT56 116 aa3□□□□□ -1.93
MCF2-210ENST00000536274 FGF23Q9GZV9 251 aaPredicted RBP3□□□□□ -1.93
MCF2-210ENST00000536274 LOXL2Q9Y4K0 774 aa3□□□□□ -1.93
MCF2-210ENST00000536274 DMXL2Q8TDJ6 3036 aa3□□□□□ -1.93
MCF2-210ENST00000536274 ZGRF1Q86YA3 2104 aa3□□□□□ -1.93
MCF2-210ENST00000536274 TRAV24A0A0B4J272 114 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 C9JCJ5 164 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 EDN2P20800 178 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 REG1BP48304 166 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 C12orf74Q32Q52 190 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 TMEM211Q6ICI0 200 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 MOGAT3Q86VF5 341 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 CXorf67Q86X51 503 aaPredicted RBP2.99□□□□□ -1.93
MCF2-210ENST00000536274 IGF2BP2-AS1Q96M15 143 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms