RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 ZNF141Q15928 474 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 TAL2Q16559 108 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 MS4A13Q5J8X5 152 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 CXorf66Q5JRM2 361 aaPredicted RBP1.95□□□□□ -2.1
SKA3-207ENST00000536239 LYRM7Q5U5X0 104 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 EBLN2Q6P2I7 272 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 AMTNQ6UX39 209 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 ZNF841Q6ZN19 808 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 PRSS41Q7RTY9 318 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 TEN1Q86WV5 123 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 APRG1Q8IVJ8 170 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 SLC22A18ASQ8N1D0 253 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 GAPTQ8N292 157 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 TMEM86AQ8N2M4 240 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 FAM19A2Q8N3H0 131 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 FGFRL1Q8N441 504 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 C3orf22Q8N5N4 141 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 GVQW1Q8N7I0 195 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 Q8N7P7 452 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 OR5C1Q8NGR4 320 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 OR10AC1Q8NH08 325 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 OTOSQ8NHW6 89 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 OCC1Q8TAD7 63 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 PIFOQ8TCI5 191 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 RNF138Q8WVD3 245 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 BAALCQ8WXS3 180 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 BADQ92934 168 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 ST6GALNAC6Q969X2 333 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 RAB37Q96AX2 223 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 ZC2HC1AQ96GY0 325 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 Q96M85 177 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 KIR2DL4Q99706 377 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 RASL11BQ9BPW5 248 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 WFDC6Q9BQY6 131 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 NAA38Q9BRA0 125 aaKnown RBP1.95□□□□□ -2.1
SKA3-207ENST00000536239 IMUPQ9GZP8 106 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 ZNF286AQ9HBT8 521 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 KCNIP2Q9NS61 270 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 IDI2-AS1Q9NZ38 188 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 KLF12Q9Y4X4 402 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 MPC1Q9Y5U8 109 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 TMEM14AQ9Y6G1 99 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 R4GN57 208 aa1.95□□□□□ -2.1
SKA3-207ENST00000536239 MDC1Q14676 2089 aaKnown RBP1.95□□□□□ -2.1
SKA3-207ENST00000536239 THSD7AQ9UPZ6 1657 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 TRBV20-1A0A075B6N2 111 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 LOC102723996A0A087X1L8 192 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 A0A0B4J2E0 115 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 IGHV1-24A0A0C4DH33 117 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 A0A0U1RRA0 63 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 LOC107984640A0A0U1RRK4 108 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 A0A1B0GX12 115 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 A0A1W2PR77 199 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 FAM24AA6NFZ4 105 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 CPSF4LA6NMK7 179 aaKnown RBP1.94□□□□□ -2.1
SKA3-207ENST00000536239 IGLL5B9A064 214 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 C9JCJ5 164 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 K7ENP7 123 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 CHST1O43916 411 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 ATP5LO75964 103 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 LEPROTL1O95214 131 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 SLC25A14O95258 325 aaPredicted RBP1.94□□□□□ -2.1
SKA3-207ENST00000536239 NCR2O95944 276 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 IGHG1P01857 330 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 FGF6P10767 208 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 B4GALT1P15291 398 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 OPRK1P41145 380 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 INSL3P51460 131 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 RBM11P57052 281 aaKnown RBP1.94□□□□□ -2.1
SKA3-207ENST00000536239 HERVK_113P63121 156 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 QRFPP83859 136 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 ADIGQ0VDE8 80 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 KLRB1Q12918 225 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 ZNF726P1Q15940 193 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 C3AR1Q16581 482 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 PHLDA2Q53GA4 152 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 SPRNQ5BIV9 151 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 C9orf153Q5TBE3 101 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 LINC01545Q5VT33 79 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 CFAP126Q5VTH2 177 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 Q6P435 159 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 SSX8Q7RTT4 187 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 ANKRD37Q7Z713 158 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 MOB3BQ86TA1 216 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 MEX3DQ86XN8 651 aaKnown RBP1.94□□□□□ -2.1
SKA3-207ENST00000536239 SBSPONQ8IVN8 264 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 MMD2Q8IY49 270 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 C10orf126Q8N4M7 172 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 GATD1Q8NB37 220 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 SUMF1Q8NBK3 374 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 ZNF740Q8NDX6 193 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 NUP35Q8NFH5 326 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 PHLDA1Q8WV24 401 aaPredicted RBP1.94□□□□□ -2.1
SKA3-207ENST00000536239 H1FXQ92522 213 aaKnown RBP1.94□□□□□ -2.1
SKA3-207ENST00000536239 ARPC1AQ92747 370 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 DLX4Q92988 240 aaPredicted RBP1.94□□□□□ -2.1
SKA3-207ENST00000536239 NUS1Q96E22 293 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 LINC00526Q96FQ7 95 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 NMNAT3Q96T66 252 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 SRSF8Q9BRL6 282 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms