RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 BMPR1BO00238 502 aa10.49□□□□□ -0.73
LDLR-203ENST00000535915 APCSP02743 223 aa10.49□□□□□ -0.73
LDLR-203ENST00000535915 RBP4P02753 201 aa10.49□□□□□ -0.73
LDLR-203ENST00000535915 RNF151Q2KHN1 245 aa10.49□□□□□ -0.73
LDLR-203ENST00000535915 OR8B3Q8NGG8 313 aa10.49□□□□□ -0.73
LDLR-203ENST00000535915 MBD6Q96DN6 1003 aa10.49□□□□□ -0.73
LDLR-203ENST00000535915 GRAMD2BQ96HH9 432 aa10.49□□□□□ -0.73
LDLR-203ENST00000535915 OR8B2Q96RD0 313 aa10.49□□□□□ -0.73
LDLR-203ENST00000535915 CCL21O00585 134 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 CDKN1AP38936 164 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 C8orf46Q8TAG6 207 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 VN1R17PQ8TDU5 208 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 COL25A1Q9BXS0 654 aaPredicted RBP10.48□□□□□ -0.73
LDLR-203ENST00000535915 NBASA2RRP1 2371 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 LY6HO94772 140 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 HIST1H1EP10412 219 aaKnown RBP10.48□□□□□ -0.73
LDLR-203ENST00000535915 CA7P43166 264 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 CDKN1BP46527 198 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 NUP35Q8NFH5 326 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 RCHY1Q96PM5 261 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 CHRDL1Q9BU40 450 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 HRNRQ86YZ3 2850 aaPredicted RBP10.48□□□□□ -0.73
LDLR-203ENST00000535915 CCL25O15444 150 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 CNIH1O95406 144 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 LIPFP07098 398 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 GPX1P07203 203 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 GP9P14770 177 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 LYZP61626 148 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 SLAQ13239 276 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 MMDQ15546 238 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 TPTE2P1Q5T6R2 138 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 TEX43Q6ZNM6 134 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 HIGD1AQ9Y241 93 aa10.48□□□□□ -0.73
LDLR-203ENST00000535915 PSG1P11464 419 aa10.47□□□□□ -0.73
LDLR-203ENST00000535915 FBXL19-AS1Q494R0 122 aa10.47□□□□□ -0.73
LDLR-203ENST00000535915 KCNS1Q96KK3 526 aa10.47□□□□□ -0.73
LDLR-203ENST00000535915 TIMM23O14925 209 aa10.47□□□□□ -0.73
LDLR-203ENST00000535915 PMCHP20382 165 aa10.47□□□□□ -0.73
LDLR-203ENST00000535915 AMTP48728 403 aa10.47□□□□□ -0.73
LDLR-203ENST00000535915 PLP1P60201 277 aa10.47□□□□□ -0.73
LDLR-203ENST00000535915 PAX2Q02962 417 aa10.47□□□□□ -0.73
LDLR-203ENST00000535915 C5orf17Q8NAS9 161 aa10.47□□□□□ -0.73
LDLR-203ENST00000535915 GPR82Q96P67 336 aa10.47□□□□□ -0.73
LDLR-203ENST00000535915 WNT10AQ9GZT5 417 aa10.47□□□□□ -0.73
LDLR-203ENST00000535915 Q9H3A6 140 aa10.47□□□□□ -0.73
LDLR-203ENST00000535915 C7orf69Q9H7B7 122 aa10.47□□□□□ -0.73
LDLR-203ENST00000535915 TBL2Q9Y4P3 447 aaKnown RBP10.47□□□□□ -0.73
LDLR-203ENST00000535915 KLF12Q9Y4X4 402 aa10.47□□□□□ -0.73
LDLR-203ENST00000535915 HIGD1CA8MV81 97 aa10.46□□□□□ -0.73
LDLR-203ENST00000535915 LY6LH3BQJ8 138 aa10.46□□□□□ -0.73
LDLR-203ENST00000535915 IGLC1P0CG04 106 aa10.46□□□□□ -0.73
LDLR-203ENST00000535915 RASL11AQ6T310 242 aa10.46□□□□□ -0.73
LDLR-203ENST00000535915 WIPF2Q8TF74 440 aaPredicted RBP10.46□□□□□ -0.73
LDLR-203ENST00000535915 TSKUQ8WUA8 353 aa10.46□□□□□ -0.73
LDLR-203ENST00000535915 RASL11BQ9BPW5 248 aa10.46□□□□□ -0.73
LDLR-203ENST00000535915 ZNF586Q9NXT0 402 aa10.46□□□□□ -0.73
LDLR-203ENST00000535915 A0A1W2PS18 150 aa10.46□□□□□ -0.74
LDLR-203ENST00000535915 KRTDAPP60985 99 aa10.46□□□□□ -0.74
LDLR-203ENST00000535915 ARF6P62330 175 aa10.46□□□□□ -0.74
LDLR-203ENST00000535915 LDLRAD2Q5SZI1 272 aa10.46□□□□□ -0.74
LDLR-203ENST00000535915 RNF5Q99942 180 aa10.46□□□□□ -0.74
LDLR-203ENST00000535915 FBXL7Q9UJT9 491 aa10.46□□□□□ -0.74
LDLR-203ENST00000535915 HILPDAQ9Y5L2 63 aa10.46□□□□□ -0.74
LDLR-203ENST00000535915 IGF2RP11717 2491 aa10.46□□□□□ -0.74
LDLR-203ENST00000535915 CSMD1Q96PZ7 3565 aa10.46□□□□□ -0.74
LDLR-203ENST00000535915 I3L2K1 104 aa10.45□□□□□ -0.74
LDLR-203ENST00000535915 HTR1DP28221 377 aa10.45□□□□□ -0.74
LDLR-203ENST00000535915 SMIM12Q96EX1 92 aa10.45□□□□□ -0.74
LDLR-203ENST00000535915 FMC1Q96HJ9 113 aa10.45□□□□□ -0.74
LDLR-203ENST00000535915 RAB1BQ9H0U4 201 aa10.45□□□□□ -0.74
LDLR-203ENST00000535915 TCRAP04437 139 aa10.45□□□□□ -0.74
LDLR-203ENST00000535915 CAMPP49913 170 aa10.45□□□□□ -0.74
LDLR-203ENST00000535915 CDSNQ15517 529 aa10.45□□□□□ -0.74
LDLR-203ENST00000535915 SLC25A39Q9BZJ4 359 aaPredicted RBP10.45□□□□□ -0.74
LDLR-203ENST00000535915 NRN1Q9NPD7 142 aa10.45□□□□□ -0.74
LDLR-203ENST00000535915 RNF114Q9Y508 228 aa10.45□□□□□ -0.74
LDLR-203ENST00000535915 TOMM40O96008 361 aa10.44□□□□□ -0.74
LDLR-203ENST00000535915 GDF5OSQ5U4N7 250 aa10.44□□□□□ -0.74
LDLR-203ENST00000535915 STPG4Q8N801 248 aa10.44□□□□□ -0.74
LDLR-203ENST00000535915 LY6G5BQ8NDX9 201 aa10.44□□□□□ -0.74
LDLR-203ENST00000535915 ORAOV1Q8WV07 137 aa10.44□□□□□ -0.74
LDLR-203ENST00000535915 TIMD4Q96H15 378 aa10.44□□□□□ -0.74
LDLR-203ENST00000535915 ALKBH7Q9BT30 221 aaPredicted RBP10.44□□□□□ -0.74
LDLR-203ENST00000535915 MLST8Q9BVC4 326 aa10.44□□□□□ -0.74
LDLR-203ENST00000535915 DPM3Q9P2X0 92 aa10.44□□□□□ -0.74
LDLR-203ENST00000535915 CBY3A6NI87 242 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 ZNF324O75467 553 aaPredicted RBP10.43□□□□□ -0.74
LDLR-203ENST00000535915 LTAP01374 205 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 CD24P25063 80 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 LINC00322Q6ZN03 302 aaPredicted RBP10.43□□□□□ -0.74
LDLR-203ENST00000535915 C18orf32Q8TCD1 76 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 IGFBPL1Q8WX77 278 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 TXN2Q99757 166 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 SSBP4Q9BWG4 385 aaPredicted RBP10.43□□□□□ -0.74
LDLR-203ENST00000535915 RPP21Q9H633 154 aaKnown RBP10.43□□□□□ -0.74
LDLR-203ENST00000535915 NBR2O15453 112 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 NDUFB8O95169 186 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 TCF24Q7RTU0 167 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 FAM19A2Q8N3H0 131 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 SRSF8Q9BRL6 282 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms