RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 K7EIM0 57 aa10.58□□□□□ -0.72
VPS33B-202ENST00000535906 PLP1P60201 277 aa10.58□□□□□ -0.72
VPS33B-202ENST00000535906 C5orf64Q2M2E5 130 aa10.58□□□□□ -0.72
VPS33B-202ENST00000535906 C1orf194Q5T5A4 169 aa10.58□□□□□ -0.72
VPS33B-202ENST00000535906 KIR3DL3Q8N743 410 aa10.58□□□□□ -0.72
VPS33B-202ENST00000535906 BLNKQ8WV28 456 aa10.58□□□□□ -0.72
VPS33B-202ENST00000535906 IZUMO1RA6ND01 250 aa10.58□□□□□ -0.72
VPS33B-202ENST00000535906 HLA-DQA1P01909 254 aa10.58□□□□□ -0.72
VPS33B-202ENST00000535906 OR10J3Q5JRS4 329 aa10.58□□□□□ -0.72
VPS33B-202ENST00000535906 SIRPDQ9H106 197 aa10.58□□□□□ -0.72
VPS33B-202ENST00000535906 GNB4Q9HAV0 340 aa10.58□□□□□ -0.72
VPS33B-202ENST00000535906 TRAV34A0A0B4J273 112 aa10.57□□□□□ -0.72
VPS33B-202ENST00000535906 KIR2DL5BA0A0G2JN68 375 aa10.57□□□□□ -0.72
VPS33B-202ENST00000535906 KIR2DL5BA0A0G2JPC4 375 aa10.57□□□□□ -0.72
VPS33B-202ENST00000535906 IGKV1-17P01599 117 aa10.57□□□□□ -0.72
VPS33B-202ENST00000535906 KLF17Q5JT82 389 aaPredicted RBP10.57□□□□□ -0.72
VPS33B-202ENST00000535906 MRPL54Q6P161 138 aaKnown RBP10.57□□□□□ -0.72
VPS33B-202ENST00000535906 KIR2DL5AQ8N109 375 aa10.57□□□□□ -0.72
VPS33B-202ENST00000535906 FAM168AQ92567 244 aa10.57□□□□□ -0.72
VPS33B-202ENST00000535906 MBD6Q96DN6 1003 aa10.57□□□□□ -0.72
VPS33B-202ENST00000535906 C2orf88Q9BSF0 95 aa10.57□□□□□ -0.72
VPS33B-202ENST00000535906 CA1P00915 261 aaPredicted RBP10.57□□□□□ -0.72
VPS33B-202ENST00000535906 NBEAP1P0C6P0 100 aa10.57□□□□□ -0.72
VPS33B-202ENST00000535906 GP9P14770 177 aa10.57□□□□□ -0.72
VPS33B-202ENST00000535906 LYZP61626 148 aa10.57□□□□□ -0.72
VPS33B-202ENST00000535906 GNG5P63218 68 aa10.57□□□□□ -0.72
VPS33B-202ENST00000535906 TBX15Q96SF7 602 aa10.57□□□□□ -0.72
VPS33B-202ENST00000535906 RASL11BQ9BPW5 248 aa10.57□□□□□ -0.72
VPS33B-202ENST00000535906 HSPB9Q9BQS6 159 aa10.57□□□□□ -0.72
VPS33B-202ENST00000535906 BPESC1Q9GZL8 116 aa10.57□□□□□ -0.72
VPS33B-202ENST00000535906 NCBP2LA6PVI3 153 aaKnown RBP10.56□□□□□ -0.72
VPS33B-202ENST00000535906 ZNF705FA8MVS1 300 aaPredicted RBP10.56□□□□□ -0.72
VPS33B-202ENST00000535906 ZNF705DP0CH99 300 aaPredicted RBP10.56□□□□□ -0.72
VPS33B-202ENST00000535906 ZNF705BP0CI00 300 aaPredicted RBP10.56□□□□□ -0.72
VPS33B-202ENST00000535906 BRS3P32247 399 aa10.56□□□□□ -0.72
VPS33B-202ENST00000535906 TMEM183BQ1AE95 376 aa10.56□□□□□ -0.72
VPS33B-202ENST00000535906 ASPHD1Q5U4P2 390 aa10.56□□□□□ -0.72
VPS33B-202ENST00000535906 CCDC144NLQ6NUI1 221 aa10.56□□□□□ -0.72
VPS33B-202ENST00000535906 RASL11AQ6T310 242 aa10.56□□□□□ -0.72
VPS33B-202ENST00000535906 SAMD10Q9BYL1 202 aa10.56□□□□□ -0.72
VPS33B-202ENST00000535906 EPDR1Q9UM22 224 aa10.56□□□□□ -0.72
VPS33B-202ENST00000535906 A0A1B0GV90 55 aa10.56□□□□□ -0.72
VPS33B-202ENST00000535906 H3BTX0 84 aa10.56□□□□□ -0.72
VPS33B-202ENST00000535906 CD33P20138 364 aa10.56□□□□□ -0.72
VPS33B-202ENST00000535906 KIAA1644Q3SXP7 199 aa10.56□□□□□ -0.72
VPS33B-202ENST00000535906 MINOS1Q5TGZ0 78 aa10.56□□□□□ -0.72
VPS33B-202ENST00000535906 NUDT10Q8NFP7 164 aa10.56□□□□□ -0.72
VPS33B-202ENST00000535906 WIPF2Q8TF74 440 aaPredicted RBP10.56□□□□□ -0.72
VPS33B-202ENST00000535906 NUDT11Q96G61 164 aa10.56□□□□□ -0.72
VPS33B-202ENST00000535906 GRAMD2BQ96HH9 432 aa10.56□□□□□ -0.72
VPS33B-202ENST00000535906 CHRDL1Q9BU40 450 aa10.56□□□□□ -0.72
VPS33B-202ENST00000535906 ZNF331Q9NQX6 463 aaPredicted RBP10.56□□□□□ -0.72
VPS33B-202ENST00000535906 HIGD1AQ9Y241 93 aa10.56□□□□□ -0.72
VPS33B-202ENST00000535906 MINOS1-NBL1R4GNA1 71 aa10.56□□□□□ -0.72
VPS33B-202ENST00000535906 ZFHX3Q15911 3703 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 IGHV2-70DA0A0C4DH43 119 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 PGPA6NDG6 321 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 BMPR1BO00238 502 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 LMO4P61968 165 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 UBE2G1P62253 170 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 NDPQ00604 133 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 ZNF562Q6V9R5 426 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 ZNF600Q6ZNG1 722 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 Q8N6K4 173 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 SMIM12Q96EX1 92 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 S4R3C0 116 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 OOSP1A8MZH6 123 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 TOX4O94842 621 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 SLC25A5P05141 298 aaKnown RBP10.55□□□□□ -0.72
VPS33B-202ENST00000535906 GPX1P07203 203 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 EBI3Q14213 229 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 USF2Q15853 346 aaPredicted RBP10.55□□□□□ -0.72
VPS33B-202ENST00000535906 TOMM20LQ6UXN7 152 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 TEX43Q6ZNM6 134 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 SIGLECL1Q8N7X8 197 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 RBM14Q96PK6 669 aaKnown RBP10.55□□□□□ -0.72
VPS33B-202ENST00000535906 SLC25A39Q9BZJ4 359 aaPredicted RBP10.55□□□□□ -0.72
VPS33B-202ENST00000535906 C7orf69Q9H7B7 122 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 KLF12Q9Y4X4 402 aa10.55□□□□□ -0.72
VPS33B-202ENST00000535906 OVOL3O00110 214 aa10.54□□□□□ -0.72
VPS33B-202ENST00000535906 APCSP02743 223 aa10.54□□□□□ -0.72
VPS33B-202ENST00000535906 HIST1H1EP10412 219 aaKnown RBP10.54□□□□□ -0.72
VPS33B-202ENST00000535906 SRIP30626 198 aa10.54□□□□□ -0.72
VPS33B-202ENST00000535906 SGK494Q96LW2 274 aa10.54□□□□□ -0.72
VPS33B-202ENST00000535906 FANCD2OSQ96PS1 177 aa10.54□□□□□ -0.72
VPS33B-202ENST00000535906 MRPL27Q9P0M9 148 aaKnown RBP10.54□□□□□ -0.72
VPS33B-202ENST00000535906 IGSF10Q6WRI0 2623 aa10.54□□□□□ -0.72
VPS33B-202ENST00000535906 ZNF253O75346 499 aa10.54□□□□□ -0.72
VPS33B-202ENST00000535906 NUP35Q8NFH5 326 aa10.54□□□□□ -0.72
VPS33B-202ENST00000535906 ARPC1AQ92747 370 aa10.54□□□□□ -0.72
VPS33B-202ENST00000535906 AJUBAQ96IF1 538 aa10.54□□□□□ -0.72
VPS33B-202ENST00000535906 KCNS1Q96KK3 526 aa10.54□□□□□ -0.72
VPS33B-202ENST00000535906 TMEM11P17152 192 aa10.53□□□□□ -0.72
VPS33B-202ENST00000535906 TSKUQ8WUA8 353 aa10.53□□□□□ -0.72
VPS33B-202ENST00000535906 UBE2E1P51965 193 aa10.53□□□□□ -0.72
VPS33B-202ENST00000535906 SLAQ13239 276 aa10.53□□□□□ -0.72
VPS33B-202ENST00000535906 FAM120AOSQ5T036 256 aa10.53□□□□□ -0.72
VPS33B-202ENST00000535906 PRR27Q6MZM9 219 aa10.53□□□□□ -0.72
VPS33B-202ENST00000535906 GPR82Q96P67 336 aa10.53□□□□□ -0.72
VPS33B-202ENST00000535906 RCHY1Q96PM5 261 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms