RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 TRAV10A0A0B4J240 114 aa14.87□□□□□ -0.03
LTBR-205ENST00000535739 FAM25EA8MYX2 175 aa14.87□□□□□ -0.03
LTBR-205ENST00000535739 CCSO14618 274 aa14.87□□□□□ -0.03
LTBR-205ENST00000535739 GOSR2O14653 212 aa14.87□□□□□ -0.03
LTBR-205ENST00000535739 IL4P05112 153 aa14.87□□□□□ -0.03
LTBR-205ENST00000535739 SLC25A6P12236 298 aa14.87□□□□□ -0.03
LTBR-205ENST00000535739 AP2S1P53680 142 aaPredicted RBP14.87□□□□□ -0.03
LTBR-205ENST00000535739 RRAS2P62070 204 aaPredicted RBP14.87□□□□□ -0.03
LTBR-205ENST00000535739 FCN2Q15485 313 aa14.87□□□□□ -0.03
LTBR-205ENST00000535739 NPIPB3Q92617 1050 aa14.87□□□□□ -0.03
LTBR-205ENST00000535739 MGAT4CQ9UBM8 478 aa14.87□□□□□ -0.03
LTBR-205ENST00000535739 CELA1Q9UNI1 258 aa14.87□□□□□ -0.03
LTBR-205ENST00000535739 hCG_2014768A0A024R1R8 64 aa14.86□□□□□ -0.03
LTBR-205ENST00000535739 IGHV4-4A0A075B6R2 117 aa14.86□□□□□ -0.03
LTBR-205ENST00000535739 C5orf51A6NDU8 294 aa14.86□□□□□ -0.03
LTBR-205ENST00000535739 SULT1A3P0DMM9 295 aa14.86□□□□□ -0.03
LTBR-205ENST00000535739 SULT1A4P0DMN0 295 aa14.86□□□□□ -0.03
LTBR-205ENST00000535739 SMCO1Q147U7 214 aa14.86□□□□□ -0.03
LTBR-205ENST00000535739 GSG1LQ6UXU4 331 aa14.86□□□□□ -0.03
LTBR-205ENST00000535739 ACY3Q96HD9 319 aa14.86□□□□□ -0.03
LTBR-205ENST00000535739 FAT2Q9NYQ8 4349 aa14.85□□□□□ -0.03
LTBR-205ENST00000535739 FAM90A26D6RGX4 464 aa14.85□□□□□ -0.03
LTBR-205ENST00000535739 SIX6O95475 246 aa14.85□□□□□ -0.03
LTBR-205ENST00000535739 NPY1RP25929 384 aa14.85□□□□□ -0.03
LTBR-205ENST00000535739 IAH1Q2TAA2 248 aaPredicted RBP14.85□□□□□ -0.03
LTBR-205ENST00000535739 ETFRF1Q6IPR1 90 aa14.85□□□□□ -0.03
LTBR-205ENST00000535739 ZNF767PQ75MW2 155 aa14.85□□□□□ -0.03
LTBR-205ENST00000535739 DNAH2Q9P225 4427 aa14.84□□□□□ -0.03
LTBR-205ENST00000535739 BUB3O43684 328 aa14.84□□□□□ -0.03
LTBR-205ENST00000535739 TOMM40O96008 361 aa14.84□□□□□ -0.03
LTBR-205ENST00000535739 RD3LP0DJH9 198 aa14.84□□□□□ -0.03
LTBR-205ENST00000535739 CXCL3P19876 107 aa14.84□□□□□ -0.03
LTBR-205ENST00000535739 SNRPD3P62318 126 aaKnown RBP14.84□□□□□ -0.03
LTBR-205ENST00000535739 SIGLEC15Q6ZMC9 328 aa14.84□□□□□ -0.03
LTBR-205ENST00000535739 OR11H7Q8NGC8 314 aa14.84□□□□□ -0.03
LTBR-205ENST00000535739 C2orf50Q96LR7 162 aa14.84□□□□□ -0.03
LTBR-205ENST00000535739 NRN1Q9NPD7 142 aa14.84□□□□□ -0.03
LTBR-205ENST00000535739 GSKIPQ9P0R6 139 aa14.84□□□□□ -0.03
LTBR-205ENST00000535739 XCL2Q9UBD3 114 aa14.84□□□□□ -0.03
LTBR-205ENST00000535739 DNAH17Q9UFH2 4485 aa14.83□□□□□ -0.03
LTBR-205ENST00000535739 PITX3O75364 302 aa14.83□□□□□ -0.04
LTBR-205ENST00000535739 H2BFSP57053 126 aa14.83□□□□□ -0.04
LTBR-205ENST00000535739 C12orf74Q32Q52 190 aa14.83□□□□□ -0.04
LTBR-205ENST00000535739 ZBTB8BQ8NAP8 495 aaPredicted RBP14.83□□□□□ -0.04
LTBR-205ENST00000535739 OR1S1Q8NH92 325 aa14.83□□□□□ -0.04
LTBR-205ENST00000535739 PKHD1P08F94 4074 aa14.82□□□□□ -0.04
LTBR-205ENST00000535739 H3BMM0 161 aa14.82□□□□□ -0.04
LTBR-205ENST00000535739 PSG1P11464 419 aa14.82□□□□□ -0.04
LTBR-205ENST00000535739 NOXA1Q86UR1 476 aa14.82□□□□□ -0.04
LTBR-205ENST00000535739 OR51G1Q8NGK1 321 aa14.82□□□□□ -0.04
LTBR-205ENST00000535739 RNF126Q9BV68 326 aa14.82□□□□□ -0.04
LTBR-205ENST00000535739 DEFB131BA0A096LNP1 70 aa14.81□□□□□ -0.04
LTBR-205ENST00000535739 IFNA10P01566 189 aa14.81□□□□□ -0.04
LTBR-205ENST00000535739 BCAP31P51572 246 aa14.81□□□□□ -0.04
LTBR-205ENST00000535739 NUTF2P61970 127 aaKnown RBP14.81□□□□□ -0.04
LTBR-205ENST00000535739 CYCSP99999 105 aaKnown RBP14.81□□□□□ -0.04
LTBR-205ENST00000535739 OR4D5Q8NGN0 318 aa14.81□□□□□ -0.04
LTBR-205ENST00000535739 SCRT1Q9BWW7 348 aa14.81□□□□□ -0.04
LTBR-205ENST00000535739 C1QTNF4Q9BXJ3 329 aa14.81□□□□□ -0.04
LTBR-205ENST00000535739 SEPSECSQ9HD40 501 aaKnown RBP14.81□□□□□ -0.04
LTBR-205ENST00000535739 CACFD1Q9UGQ2 172 aa14.81□□□□□ -0.04
LTBR-205ENST00000535739 KIAA1109Q2LD37 5005 aa14.8□□□□□ -0.04
LTBR-205ENST00000535739 CHAC2Q8WUX2 184 aa14.8□□□□□ -0.04
LTBR-205ENST00000535739 NMES1Q9C002 83 aa14.8□□□□□ -0.04
LTBR-205ENST00000535739 HLA-DRB4P13762 266 aa14.79□□□□□ -0.04
LTBR-205ENST00000535739 DEFB1P60022 68 aa14.79□□□□□ -0.04
LTBR-205ENST00000535739 ID3Q02535 119 aa14.79□□□□□ -0.04
LTBR-205ENST00000535739 IL15RAQ13261 267 aa14.79□□□□□ -0.04
LTBR-205ENST00000535739 GDF5OSQ5U4N7 250 aa14.79□□□□□ -0.04
LTBR-205ENST00000535739 RNF125Q96EQ8 232 aa14.79□□□□□ -0.04
LTBR-205ENST00000535739 PBDC1Q9BVG4 233 aa14.79□□□□□ -0.04
LTBR-205ENST00000535739 RBKSQ9H477 322 aa14.79□□□□□ -0.04
LTBR-205ENST00000535739 HSPB7Q9UBY9 170 aa14.79□□□□□ -0.04
LTBR-205ENST00000535739 U3KQ87 197 aa14.79□□□□□ -0.04
LTBR-205ENST00000535739 HLA-DRB4X5D2U9 266 aa14.79□□□□□ -0.04
LTBR-205ENST00000535739 AMBPP02760 352 aa14.78□□□□□ -0.04
LTBR-205ENST00000535739 NKX2-1P43699 371 aaPredicted RBP14.78□□□□□ -0.04
LTBR-205ENST00000535739 DTD1Q8TEA8 209 aa14.78□□□□□ -0.04
LTBR-205ENST00000535739 ASB13Q8WXK3 278 aa14.78□□□□□ -0.04
LTBR-205ENST00000535739 IGKV3-20P01619 116 aa14.77□□□□□ -0.05
LTBR-205ENST00000535739 MBPP02686 304 aaPredicted RBP14.77□□□□□ -0.05
LTBR-205ENST00000535739 GIPP09681 153 aaPredicted RBP14.77□□□□□ -0.05
LTBR-205ENST00000535739 FXYD7P58549 80 aa14.77□□□□□ -0.05
LTBR-205ENST00000535739 IGKV1D-37A0A075B6S9 117 aa14.76□□□□□ -0.05
LTBR-205ENST00000535739 MED6O75586 246 aa14.76□□□□□ -0.05
LTBR-205ENST00000535739 SCGB1D2O95969 90 aa14.76□□□□□ -0.05
LTBR-205ENST00000535739 ZNF90Q03938 601 aa14.76□□□□□ -0.05
LTBR-205ENST00000535739 GAMTQ14353 236 aa14.76□□□□□ -0.05
LTBR-205ENST00000535739 ZNF705AQ6ZN79 300 aaPredicted RBP14.76□□□□□ -0.05
LTBR-205ENST00000535739 LINC00052Q96N35 136 aa14.76□□□□□ -0.05
LTBR-205ENST00000535739 MAGT1Q9H0U3 335 aa14.76□□□□□ -0.05
LTBR-205ENST00000535739 ZFP92A6NM28 416 aa14.75□□□□□ -0.05
LTBR-205ENST00000535739 RAP2BP61225 183 aa14.75□□□□□ -0.05
LTBR-205ENST00000535739 POLR2GP62487 172 aaKnown RBP eCLIP14.75□□□□□ -0.05
LTBR-205ENST00000535739 OR8G2PQ6IF36 304 aa14.75□□□□□ -0.05
LTBR-205ENST00000535739 PPP1R1CQ8WVI7 109 aa14.75□□□□□ -0.05
LTBR-205ENST00000535739 NDUFAF3Q9BU61 184 aa14.75□□□□□ -0.05
LTBR-205ENST00000535739 IGHV3OR16-12A0A075B7B8 117 aa14.74□□□□□ -0.05
LTBR-205ENST00000535739 ZNF705FA8MVS1 300 aaPredicted RBP14.74□□□□□ -0.05
LTBR-205ENST00000535739 K7EPK0 472 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms