RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 OR1L4Q8NGR5 311 aa4.67□□□□□ -1.66
TNFRSF1A-206ENST00000535038 SMIM12Q96EX1 92 aa4.67□□□□□ -1.66
TNFRSF1A-206ENST00000535038 TMEM133Q9H2Q1 129 aa4.67□□□□□ -1.66
TNFRSF1A-206ENST00000535038 PRO1933Q9H354 126 aa4.67□□□□□ -1.66
TNFRSF1A-206ENST00000535038 MAP1BP46821 2468 aaKnown RBP4.67□□□□□ -1.66
TNFRSF1A-206ENST00000535038 PTPRQQ9UMZ3 2332 aa4.67□□□□□ -1.66
TNFRSF1A-206ENST00000535038 IGHV2-26A0A0B4J1V2 119 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 TRBV6-1A0A0K0K1D8 114 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 A0A1B0GXF2 115 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 IZUMO1RA6ND01 250 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 F2Z2F3 143 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 K7ENP7 123 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 PEX7O00628 323 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 OR7C2O60412 319 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 SERF1AO75920 110 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 GP9P14770 177 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 CRISP2P16562 243 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 HNF1AP20823 631 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 SUB1P53999 127 aaKnown RBP eCLIP4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 UBE2L3P68036 154 aaKnown RBP4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 VMA21Q3ZAQ7 101 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 TIGITQ495A1 244 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 PRR30Q53SZ7 412 aaPredicted RBP4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 OR10J3Q5JRS4 329 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 C10orf25Q5T742 122 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 C10orf113Q5VZT2 155 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 WDR73Q6P4I2 378 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 RASL11AQ6T310 242 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 OR8I2Q8N0Y5 310 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 OR5AU1Q8NGC0 362 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 OR10X1Q8NGY0 326 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 SPATA3Q8NHX4 192 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 CMTM2Q8TAZ6 248 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 TMEM190Q8WZ59 177 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 NPIPB3Q92617 1050 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 RNF5Q99942 180 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 C20orf144Q9BQM9 153 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 SRSF8Q9BRL6 282 aaKnown RBP4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 PAXXQ9BUH6 204 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 RNASE7Q9H1E1 156 aaKnown RBP4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 NGBQ9NPG2 151 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 ZNF355PQ9NSJ1 428 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 NAGKQ9UJ70 344 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 SIGLEC9Q9Y336 463 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 AMMECR1Q9Y4X0 333 aaPredicted RBP4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 TLN1Q9Y490 2541 aaKnown RBP4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 NBEAQ8NFP9 2946 aa4.66□□□□□ -1.66
TNFRSF1A-206ENST00000535038 DMXL1Q9Y485 3027 aa4.65□□□□□ -1.66
TNFRSF1A-206ENST00000535038 IGHV1-3A0A0C4DH29 117 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 IGHV1-69-2A0A0G2JMI3 117 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 GRIFINA4D1Z8 144 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 C19orf71A6NCJ1 209 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 VSTM5A8MXK1 200 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 SNURFLB1AK76 121 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 BUB1B-PAK6H3BSN5 160 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 I3L2K1 104 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 BMPR1BO00238 502 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 SLC25A17O43808 307 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 COX7A2P2O60397 106 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 OR2J3O76001 311 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 PYYP10082 97 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 CNTFRP26992 372 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 IER3P46695 156 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 RPL27AP46776 148 aaKnown RBP4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 TPPP2P59282 170 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 BPIFB3P59826 476 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 ERVFC1-1P60608 527 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 RANP62826 216 aaKnown RBP4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 KLF5Q13887 457 aaPredicted RBP4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 TMEM183BQ1AE95 376 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 LDLRAD2Q5SZI1 272 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 GDF5OSQ5U4N7 250 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 ETFRF1Q6IPR1 90 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 MRPL52Q86TS9 123 aaKnown RBP4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 STXBP6Q8NFX7 210 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 H1FXQ92522 213 aaKnown RBP4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 CCL17Q92583 94 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 GRAMD2BQ96HH9 432 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 MS4A10Q96PG2 267 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 PRR25Q96S07 402 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 GNB4Q9HAV0 340 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 TMEM14CQ9P0S9 112 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 ZNF492Q9P255 531 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 RALYQ9UKM9 306 aaKnown RBP4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 F11RQ9Y624 299 aaKnown RBP4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 ASPMQ8IZT6 3477 aa4.65□□□□□ -1.67
TNFRSF1A-206ENST00000535038 MGAQ8IWI9 3026 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 ZFHX2Q9C0A1 2572 aaPredicted RBP4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 CORTO00230 105 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 FCN1O00602 326 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 TOMM40O96008 361 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 PLAUP00749 431 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 HLA-DQA1P01909 254 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 GPX1P07203 203 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 IGLC1P0CG04 106 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 RAB4AP20338 218 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 RBPJQ06330 500 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 KLK9Q2XQG4 91 aa4.64□□□□□ -1.67
TNFRSF1A-206ENST00000535038 IBA57Q5T440 356 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms