RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 CD24P25063 80 aa15.46■□□□□ 0.07
SMPD1-210ENST00000534405 PRR31Q5SQ13 230 aa15.46■□□□□ 0.07
SMPD1-210ENST00000534405 ZNRF1Q8ND25 227 aa15.46■□□□□ 0.07
SMPD1-210ENST00000534405 SOX21Q9Y651 276 aaPredicted RBP15.46■□□□□ 0.07
SMPD1-210ENST00000534405 TTC28Q96AY4 2481 aa15.46■□□□□ 0.07
SMPD1-210ENST00000534405 CNOT1A5YKK6 2376 aaKnown RBP15.46■□□□□ 0.07
SMPD1-210ENST00000534405 FAM90A9PA6NNJ1 464 aa15.46■□□□□ 0.07
SMPD1-210ENST00000534405 DEFB109BQ30KR1 87 aa15.46■□□□□ 0.07
SMPD1-210ENST00000534405 C1orf229Q6ZS94 237 aaPredicted RBP15.46■□□□□ 0.07
SMPD1-210ENST00000534405 TMUB1Q9BVT8 246 aa15.46■□□□□ 0.07
SMPD1-210ENST00000534405 SS18L2Q9UHA2 77 aa15.46■□□□□ 0.07
SMPD1-210ENST00000534405 TET2Q6N021 2002 aaPredicted RBP15.45■□□□□ 0.06
SMPD1-210ENST00000534405 KBTBD11-OT1A0A1B0GTJ5 212 aa15.45■□□□□ 0.06
SMPD1-210ENST00000534405 C1orf122Q6ZSJ8 110 aa15.45■□□□□ 0.06
SMPD1-210ENST00000534405 GPR82Q96P67 336 aa15.45■□□□□ 0.06
SMPD1-210ENST00000534405 C7orf69Q9H7B7 122 aa15.45■□□□□ 0.06
SMPD1-210ENST00000534405 TRAV3A0A0B4J244 114 aa15.45■□□□□ 0.06
SMPD1-210ENST00000534405 A0A1W2PRD5 423 aa15.45■□□□□ 0.06
SMPD1-210ENST00000534405 A0A1W2PRF3 423 aa15.45■□□□□ 0.06
SMPD1-210ENST00000534405 A0A1W2PRM7 423 aa15.45■□□□□ 0.06
SMPD1-210ENST00000534405 LOXL3P58215 753 aa15.45■□□□□ 0.06
SMPD1-210ENST00000534405 ATP5G2Q06055 141 aa15.45■□□□□ 0.06
SMPD1-210ENST00000534405 CR1LQ2VPA4 569 aa15.45■□□□□ 0.06
SMPD1-210ENST00000534405 TMEM177Q53S58 311 aa15.45■□□□□ 0.06
SMPD1-210ENST00000534405 TTC9CQ8N5M4 171 aa15.45■□□□□ 0.06
SMPD1-210ENST00000534405 LINC00479Q96M42 142 aa15.45■□□□□ 0.06
SMPD1-210ENST00000534405 C18orf15Q96N68 181 aa15.45■□□□□ 0.06
SMPD1-210ENST00000534405 ERG28Q9UKR5 140 aa15.45■□□□□ 0.06
SMPD1-210ENST00000534405 LAMA5O15230 3695 aa15.44■□□□□ 0.06
SMPD1-210ENST00000534405 GATA3P23771 443 aa15.44■□□□□ 0.06
SMPD1-210ENST00000534405 ZNF138P52744 262 aa15.44■□□□□ 0.06
SMPD1-210ENST00000534405 TAS2R45P59539 299 aa15.44■□□□□ 0.06
SMPD1-210ENST00000534405 FAM201AQ5SY85 155 aa15.44■□□□□ 0.06
SMPD1-210ENST00000534405 ICE1Q9Y2F5 2266 aa15.44■□□□□ 0.06
SMPD1-210ENST00000534405 TEX50A0A1B0GTY4 177 aa15.44■□□□□ 0.06
SMPD1-210ENST00000534405 MGST3O14880 152 aa15.44■□□□□ 0.06
SMPD1-210ENST00000534405 C8orf86Q6ZUL3 223 aa15.44■□□□□ 0.06
SMPD1-210ENST00000534405 ABHD12Q8N2K0 398 aa15.44■□□□□ 0.06
SMPD1-210ENST00000534405 RPRMLQ8N4K4 120 aa15.44■□□□□ 0.06
SMPD1-210ENST00000534405 NABP2Q9BQ15 211 aa15.44■□□□□ 0.06
SMPD1-210ENST00000534405 IFI27L2Q9H2X8 130 aa15.44■□□□□ 0.06
SMPD1-210ENST00000534405 PIP4P2Q8N4L2 257 aa15.43■□□□□ 0.06
SMPD1-210ENST00000534405 ZADH2Q8N4Q0 377 aa15.43■□□□□ 0.06
SMPD1-210ENST00000534405 LEAP2Q969E1 77 aa15.43■□□□□ 0.06
SMPD1-210ENST00000534405 DMXL1Q9Y485 3027 aa15.43■□□□□ 0.06
SMPD1-210ENST00000534405 DSCAMO60469 2012 aa15.43■□□□□ 0.06
SMPD1-210ENST00000534405 SLC25A17O43808 307 aa15.43■□□□□ 0.06
SMPD1-210ENST00000534405 MOGAT3Q86VF5 341 aa15.43■□□□□ 0.06
SMPD1-210ENST00000534405 TMEM116Q8NCL8 245 aa15.43■□□□□ 0.06
SMPD1-210ENST00000534405 CT45A6P0DMU7 189 aa15.42■□□□□ 0.06
SMPD1-210ENST00000534405 CT45A5P0DMU8 189 aa15.42■□□□□ 0.06
SMPD1-210ENST00000534405 CT45A7P0DMV0 189 aa15.42■□□□□ 0.06
SMPD1-210ENST00000534405 ETDBQ3ZM63 59 aa15.42■□□□□ 0.06
SMPD1-210ENST00000534405 CT45A1Q5HYN5 189 aa15.42■□□□□ 0.06
SMPD1-210ENST00000534405 SH2D6Q7Z4S9 175 aa15.42■□□□□ 0.06
SMPD1-210ENST00000534405 CT45A3Q8NHU0 189 aa15.42■□□□□ 0.06
SMPD1-210ENST00000534405 PHLDA1Q8WV24 401 aaPredicted RBP15.42■□□□□ 0.06
SMPD1-210ENST00000534405 M0R1B8 84 aa15.42■□□□□ 0.06
SMPD1-210ENST00000534405 ZNF474Q6S9Z5 364 aaPredicted RBP15.42■□□□□ 0.06
SMPD1-210ENST00000534405 RNF183Q96D59 192 aa15.42■□□□□ 0.06
SMPD1-210ENST00000534405 FAM110AQ9BQ89 295 aa15.42■□□□□ 0.06
SMPD1-210ENST00000534405 MBD3L4A6NDZ8 208 aaPredicted RBP15.41■□□□□ 0.06
SMPD1-210ENST00000534405 MBD3L3A6NE82 208 aaPredicted RBP15.41■□□□□ 0.06
SMPD1-210ENST00000534405 MBD3L5A6NJ08 208 aaPredicted RBP15.41■□□□□ 0.06
SMPD1-210ENST00000534405 A8MWL6 223 aa15.41■□□□□ 0.06
SMPD1-210ENST00000534405 FNDC10F2Z333 226 aa15.41■□□□□ 0.06
SMPD1-210ENST00000534405 DUX4L9Q6RFH8 374 aaPredicted RBP15.41■□□□□ 0.06
SMPD1-210ENST00000534405 MBD3L2Q8NHZ7 208 aaPredicted RBP15.41■□□□□ 0.06
SMPD1-210ENST00000534405 CYSLTR1Q9Y271 337 aa15.41■□□□□ 0.06
SMPD1-210ENST00000534405 SPRY3O43610 288 aa15.41■□□□□ 0.06
SMPD1-210ENST00000534405 CFHR2P36980 270 aa15.41■□□□□ 0.06
SMPD1-210ENST00000534405 MZT1Q08AG7 82 aa15.41■□□□□ 0.06
SMPD1-210ENST00000534405 ARPC1AQ92747 370 aa15.41■□□□□ 0.06
SMPD1-210ENST00000534405 LINC00312Q9Y6C7 94 aa15.41■□□□□ 0.06
SMPD1-210ENST00000534405 LGALS9BQ3B8N2 356 aa15.4■□□□□ 0.06
SMPD1-210ENST00000534405 LGALS9CQ6DKI2 356 aa15.4■□□□□ 0.06
SMPD1-210ENST00000534405 FAM169BQ8N8A8 192 aa15.4■□□□□ 0.06
SMPD1-210ENST00000534405 ZNF502Q8TBZ5 544 aa15.4■□□□□ 0.06
SMPD1-210ENST00000534405 AMMECR1Q9Y4X0 333 aaPredicted RBP15.4■□□□□ 0.06
SMPD1-210ENST00000534405 E9PLD3 99 aa15.39■□□□□ 0.05
SMPD1-210ENST00000534405 CSN1S1P47710 185 aa15.39■□□□□ 0.05
SMPD1-210ENST00000534405 ITLN1Q8WWA0 313 aa15.39■□□□□ 0.05
SMPD1-210ENST00000534405 CALYQ9NYX4 217 aa15.39■□□□□ 0.05
SMPD1-210ENST00000534405 TRGV8A0A0C4DH27 118 aa15.39■□□□□ 0.05
SMPD1-210ENST00000534405 LHBP01229 141 aa15.39■□□□□ 0.05
SMPD1-210ENST00000534405 SPINK8P0C7L1 97 aa15.39■□□□□ 0.05
SMPD1-210ENST00000534405 CGB3P0DN86 165 aa15.39■□□□□ 0.05
SMPD1-210ENST00000534405 CGB7P0DN87 165 aa15.39■□□□□ 0.05
SMPD1-210ENST00000534405 C17orf58Q2M2W7 97 aa15.39■□□□□ 0.05
SMPD1-210ENST00000534405 DDB2Q92466 427 aa15.39■□□□□ 0.05
SMPD1-210ENST00000534405 AP5S1Q9NUS5 200 aa15.39■□□□□ 0.05
SMPD1-210ENST00000534405 TMEM140Q9NV12 185 aa15.39■□□□□ 0.05
SMPD1-210ENST00000534405 TIMM8BQ9Y5J9 83 aaPredicted RBP15.39■□□□□ 0.05
SMPD1-210ENST00000534405 KLK10O43240 276 aa15.38■□□□□ 0.05
SMPD1-210ENST00000534405 FXYD2P54710 66 aa15.38■□□□□ 0.05
SMPD1-210ENST00000534405 CT83Q5H943 113 aa15.38■□□□□ 0.05
SMPD1-210ENST00000534405 FAM215AQ9Y5M1 114 aa15.38■□□□□ 0.05
SMPD1-210ENST00000534405 DSCAML1Q8TD84 2053 aa15.38■□□□□ 0.05
SMPD1-210ENST00000534405 PEX7O00628 323 aa15.38■□□□□ 0.05
SMPD1-210ENST00000534405 TNFRSF13BO14836 293 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms