RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 TRAV1-1A0A0B4J248 108 aa14.13□□□□□ -0.15
PHRF1-206ENST00000534320 ZNF56Q15929 161 aa14.13□□□□□ -0.15
PHRF1-206ENST00000534320 PYY3Q5JQD4 70 aa14.13□□□□□ -0.15
PHRF1-206ENST00000534320 SFTA2Q6UW10 78 aa14.13□□□□□ -0.15
PHRF1-206ENST00000534320 NPFFR1Q9GZQ6 430 aa14.13□□□□□ -0.15
PHRF1-206ENST00000534320 Q9H3A6 140 aa14.13□□□□□ -0.15
PHRF1-206ENST00000534320 MSRB2Q9Y3D2 182 aa14.13□□□□□ -0.15
PHRF1-206ENST00000534320 TTC28Q96AY4 2481 aa14.13□□□□□ -0.15
PHRF1-206ENST00000534320 DPM2O94777 84 aa14.13□□□□□ -0.15
PHRF1-206ENST00000534320 ERVK11-1P61568 191 aa14.13□□□□□ -0.15
PHRF1-206ENST00000534320 Q6ZRM9 215 aa14.13□□□□□ -0.15
PHRF1-206ENST00000534320 PIP4P1Q86T03 277 aa14.13□□□□□ -0.15
PHRF1-206ENST00000534320 FMC1Q96HJ9 113 aa14.13□□□□□ -0.15
PHRF1-206ENST00000534320 SLC25A48Q6ZT89 311 aaKnown RBP14.13□□□□□ -0.15
PHRF1-206ENST00000534320 GPX1P07203 203 aa14.13□□□□□ -0.15
PHRF1-206ENST00000534320 CHCHD1Q96BP2 118 aaKnown RBP14.13□□□□□ -0.15
PHRF1-206ENST00000534320 IGHV3-66A0A0C4DH42 116 aa14.12□□□□□ -0.15
PHRF1-206ENST00000534320 DIDO1Q9BTC0 2240 aaKnown RBP14.12□□□□□ -0.15
PHRF1-206ENST00000534320 IGHV3OR16-8A0A075B7F1 116 aa14.12□□□□□ -0.15
PHRF1-206ENST00000534320 HBDP02042 147 aa14.12□□□□□ -0.15
PHRF1-206ENST00000534320 ZNF106Q9H2Y7 1883 aaKnown RBP14.12□□□□□ -0.15
PHRF1-206ENST00000534320 HIGD1CA8MV81 97 aa14.12□□□□□ -0.15
PHRF1-206ENST00000534320 LMO1P25800 156 aa14.12□□□□□ -0.15
PHRF1-206ENST00000534320 GFI1BQ5VTD9 330 aa14.12□□□□□ -0.15
PHRF1-206ENST00000534320 GAGE12BA1L429 117 aa14.12□□□□□ -0.15
PHRF1-206ENST00000534320 CLEC19AQ6UXS0 136 aa14.12□□□□□ -0.15
PHRF1-206ENST00000534320 RPP25LQ8N5L8 163 aaKnown RBP14.12□□□□□ -0.15
PHRF1-206ENST00000534320 TRAV5A0A0B4J249 113 aa14.11□□□□□ -0.15
PHRF1-206ENST00000534320 A0A1W2PRE2 83 aa14.11□□□□□ -0.15
PHRF1-206ENST00000534320 H7C1H1 209 aa14.11□□□□□ -0.15
PHRF1-206ENST00000534320 K7ENP7 123 aa14.11□□□□□ -0.15
PHRF1-206ENST00000534320 C1QTNF9P0C862 333 aa14.11□□□□□ -0.15
PHRF1-206ENST00000534320 OSTCQ9NRP0 149 aa14.11□□□□□ -0.15
PHRF1-206ENST00000534320 PYYP10082 97 aa14.11□□□□□ -0.15
PHRF1-206ENST00000534320 ATXN8Q156A1 80 aa14.11□□□□□ -0.15
PHRF1-206ENST00000534320 PVRIGQ6DKI7 326 aa14.11□□□□□ -0.15
PHRF1-206ENST00000534320 CIARTQ8N365 385 aaPredicted RBP14.11□□□□□ -0.15
PHRF1-206ENST00000534320 AKAP6Q13023 2319 aa14.11□□□□□ -0.15
PHRF1-206ENST00000534320 COL4A3Q01955 1670 aa14.11□□□□□ -0.15
PHRF1-206ENST00000534320 A0A1B0GW64 132 aa14.11□□□□□ -0.15
PHRF1-206ENST00000534320 SPINK8P0C7L1 97 aa14.11□□□□□ -0.15
PHRF1-206ENST00000534320 Q6ZR03 302 aa14.11□□□□□ -0.15
PHRF1-206ENST00000534320 CENPVQ7Z7K6 275 aaPredicted RBP14.11□□□□□ -0.15
PHRF1-206ENST00000534320 WDR86Q86TI4 376 aa14.11□□□□□ -0.15
PHRF1-206ENST00000534320 TDGF1P3P51864 188 aa14.11□□□□□ -0.15
PHRF1-206ENST00000534320 FAM74A4Q5TZK3 123 aa14.11□□□□□ -0.15
PHRF1-206ENST00000534320 TDGF1P13385 188 aa14.1□□□□□ -0.15
PHRF1-206ENST00000534320 LEPP41159 167 aa14.1□□□□□ -0.15
PHRF1-206ENST00000534320 H0YJW9 148 aa14.1□□□□□ -0.15
PHRF1-206ENST00000534320 PRR30Q53SZ7 412 aaPredicted RBP14.1□□□□□ -0.15
PHRF1-206ENST00000534320 YAE1D1Q9NRH1 226 aa14.1□□□□□ -0.15
PHRF1-206ENST00000534320 IGHV1-3A0A0C4DH29 117 aa14.1□□□□□ -0.15
PHRF1-206ENST00000534320 RRN3P1Q2M238 152 aa14.1□□□□□ -0.15
PHRF1-206ENST00000534320 TMEM167AQ8TBQ9 72 aa14.1□□□□□ -0.15
PHRF1-206ENST00000534320 RNF125Q96EQ8 232 aa14.1□□□□□ -0.15
PHRF1-206ENST00000534320 LIME1Q9H400 295 aa14.1□□□□□ -0.15
PHRF1-206ENST00000534320 TRAV8-1A0A0A6YYK1 113 aa14.1□□□□□ -0.15
PHRF1-206ENST00000534320 WIPF3A6NGB9 483 aa14.09□□□□□ -0.15
PHRF1-206ENST00000534320 RNF166Q96A37 237 aaPredicted RBP14.09□□□□□ -0.15
PHRF1-206ENST00000534320 CITED2Q99967 270 aaPredicted RBP14.09□□□□□ -0.15
PHRF1-206ENST00000534320 OTORQ9NRC9 128 aa14.09□□□□□ -0.15
PHRF1-206ENST00000534320 CRIM1Q9NZV1 1036 aa14.09□□□□□ -0.15
PHRF1-206ENST00000534320 TRAV12-3A0A0B4J271 114 aa14.09□□□□□ -0.15
PHRF1-206ENST00000534320 CNTFRP26992 372 aa14.09□□□□□ -0.15
PHRF1-206ENST00000534320 OCIAD2Q56VL3 154 aa14.09□□□□□ -0.15
PHRF1-206ENST00000534320 LYPD2Q6UXB3 125 aa14.09□□□□□ -0.15
PHRF1-206ENST00000534320 PCNX2A6NKB5 2137 aa14.09□□□□□ -0.15
PHRF1-206ENST00000534320 EFNA4P52798 201 aa14.09□□□□□ -0.15
PHRF1-206ENST00000534320 GNG5P63218 68 aa14.09□□□□□ -0.15
PHRF1-206ENST00000534320 ZNF562Q6V9R5 426 aa14.09□□□□□ -0.15
PHRF1-206ENST00000534320 E7EQL1 145 aa14.09□□□□□ -0.15
PHRF1-206ENST00000534320 FAM71F2Q6NXP2 309 aa14.09□□□□□ -0.15
PHRF1-206ENST00000534320 LHFPL4Q7Z7J7 247 aa14.09□□□□□ -0.15
PHRF1-206ENST00000534320 C3orf36Q3SXR2 165 aa14.08□□□□□ -0.16
PHRF1-206ENST00000534320 FAM159AQ6UWV7 190 aa14.08□□□□□ -0.16
PHRF1-206ENST00000534320 RNASE7Q9H1E1 156 aaKnown RBP14.08□□□□□ -0.16
PHRF1-206ENST00000534320 TRAV21A0A0B4J279 112 aa14.08□□□□□ -0.16
PHRF1-206ENST00000534320 NPFFO15130 113 aa14.08□□□□□ -0.16
PHRF1-206ENST00000534320 GZMBP10144 247 aa14.08□□□□□ -0.16
PHRF1-206ENST00000534320 PSG1P11464 419 aa14.08□□□□□ -0.16
PHRF1-206ENST00000534320 PRTN3P24158 256 aa14.08□□□□□ -0.16
PHRF1-206ENST00000534320 MYOD1P15172 320 aa14.08□□□□□ -0.16
PHRF1-206ENST00000534320 CEACAM8P31997 349 aaPredicted RBP14.08□□□□□ -0.16
PHRF1-206ENST00000534320 SMPXQ9UHP9 88 aa14.08□□□□□ -0.16
PHRF1-206ENST00000534320 ITGB1BP1O14713 200 aa14.08□□□□□ -0.16
PHRF1-206ENST00000534320 CXCL1P09341 107 aa14.08□□□□□ -0.16
PHRF1-206ENST00000534320 PLNP26678 52 aa14.08□□□□□ -0.16
PHRF1-206ENST00000534320 LINC01559Q495D7 138 aa14.08□□□□□ -0.16
PHRF1-206ENST00000534320 OCC1Q8TAD7 63 aa14.08□□□□□ -0.16
PHRF1-206ENST00000534320 ERG28Q9UKR5 140 aa14.08□□□□□ -0.16
PHRF1-206ENST00000534320 EPDR1Q9UM22 224 aa14.08□□□□□ -0.16
PHRF1-206ENST00000534320 C15orf62A8K5M9 175 aa14.07□□□□□ -0.16
PHRF1-206ENST00000534320 WNT2P09544 360 aa14.07□□□□□ -0.16
PHRF1-206ENST00000534320 NXT2Q9NPJ8 142 aaKnown RBP14.07□□□□□ -0.16
PHRF1-206ENST00000534320 IGKCP01834 107 aa14.07□□□□□ -0.16
PHRF1-206ENST00000534320 COL8A2P25067 703 aa14.07□□□□□ -0.16
PHRF1-206ENST00000534320 TMEM155Q4W5P6 130 aa14.07□□□□□ -0.16
PHRF1-206ENST00000534320 KIR3DL3Q8N743 410 aa14.07□□□□□ -0.16
PHRF1-206ENST00000534320 TMEM101Q96IK0 257 aa14.07□□□□□ -0.16
PHRF1-206ENST00000534320 IGLV1-44P01699 117 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms