RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 LILRB2Q8N423 598 aa11.69□□□□□ -0.54
CHMP4A-207ENST00000533523 OR5C1Q8NGR4 320 aa11.69□□□□□ -0.54
CHMP4A-207ENST00000533523 TMEM190Q8WZ59 177 aa11.69□□□□□ -0.54
CHMP4A-207ENST00000533523 PINX1Q96BK5 328 aaKnown RBP11.69□□□□□ -0.54
CHMP4A-207ENST00000533523 WFDC1Q9HC57 220 aa11.69□□□□□ -0.54
CHMP4A-207ENST00000533523 UBQLN2Q9UHD9 624 aa11.69□□□□□ -0.54
CHMP4A-207ENST00000533523 BOLA1Q9Y3E2 137 aa11.69□□□□□ -0.54
CHMP4A-207ENST00000533523 NUPL2O15504 423 aaKnown RBP11.68□□□□□ -0.54
CHMP4A-207ENST00000533523 BCL2L11O43521 198 aa11.68□□□□□ -0.54
CHMP4A-207ENST00000533523 SPRY2O43597 315 aa11.68□□□□□ -0.54
CHMP4A-207ENST00000533523 MT-CO2P00403 227 aa11.68□□□□□ -0.54
CHMP4A-207ENST00000533523 BMI1P35226 326 aa11.68□□□□□ -0.54
CHMP4A-207ENST00000533523 OPRK1P41145 380 aa11.68□□□□□ -0.54
CHMP4A-207ENST00000533523 DLK1P80370 383 aa11.68□□□□□ -0.54
CHMP4A-207ENST00000533523 RELQ04864 619 aaPredicted RBP11.68□□□□□ -0.54
CHMP4A-207ENST00000533523 RPP25LQ8N5L8 163 aaKnown RBP11.68□□□□□ -0.54
CHMP4A-207ENST00000533523 ARPC5LQ9BPX5 153 aa11.68□□□□□ -0.54
CHMP4A-207ENST00000533523 FNDC4Q9H6D8 234 aaPredicted RBP11.68□□□□□ -0.54
CHMP4A-207ENST00000533523 MRPL27Q9P0M9 148 aaKnown RBP11.68□□□□□ -0.54
CHMP4A-207ENST00000533523 TP53TG1Q9Y2A0 90 aa11.68□□□□□ -0.54
CHMP4A-207ENST00000533523 KLK5Q9Y337 293 aaPredicted RBP11.68□□□□□ -0.54
CHMP4A-207ENST00000533523 TRAV25A0A0B4J276 109 aa11.67□□□□□ -0.54
CHMP4A-207ENST00000533523 KANTRA0A1W2PQU2 76 aa11.67□□□□□ -0.54
CHMP4A-207ENST00000533523 F8W735 103 aaPredicted RBP11.67□□□□□ -0.54
CHMP4A-207ENST00000533523 GPX4P36969 197 aaPredicted RBP11.67□□□□□ -0.54
CHMP4A-207ENST00000533523 MLANAQ16655 118 aa11.67□□□□□ -0.54
CHMP4A-207ENST00000533523 ATP6V1FQ16864 119 aa11.67□□□□□ -0.54
CHMP4A-207ENST00000533523 WFDC3Q8IUB2 231 aa11.67□□□□□ -0.54
CHMP4A-207ENST00000533523 ATP5SQ99766 215 aa11.67□□□□□ -0.54
CHMP4A-207ENST00000533523 TMEM147Q9BVK8 224 aa11.67□□□□□ -0.54
CHMP4A-207ENST00000533523 DAZ1Q9NQZ3 744 aaKnown RBP11.67□□□□□ -0.54
CHMP4A-207ENST00000533523 HSPG2P98160 4391 aa11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 RPS10-NUDT3A0A1W2PQS6 291 aa11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 TAAR5O14804 337 aa11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 GNG7O60262 68 aa11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 SCGB2A1O75556 95 aa11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 DFFBO76075 338 aa11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 IGHV3-48P01763 117 aa11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 C8orf88P0DMB2 117 aa11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 C4BPBP20851 252 aa11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 NPBWR1P48145 328 aa11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 OPCMLQ14982 345 aa11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 ETFRF1Q6IPR1 90 aa11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 Q6ZWC4 215 aa11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 SLC35E1Q96K37 410 aa11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 SPAG8Q99932 426 aaPredicted RBP11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 CHRDL1Q9BU40 450 aa11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 GGACTQ9BVM4 153 aa11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 CYTL1Q9NRR1 136 aa11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 UQCC1Q9NVA1 299 aa11.66□□□□□ -0.54
CHMP4A-207ENST00000533523 UBE2L5PA0A1B0GUS4 154 aa11.65□□□□□ -0.54
CHMP4A-207ENST00000533523 SMCO3A2RU48 225 aa11.65□□□□□ -0.54
CHMP4A-207ENST00000533523 FNDC10F2Z333 226 aa11.65□□□□□ -0.54
CHMP4A-207ENST00000533523 K7EMT4 169 aa11.65□□□□□ -0.54
CHMP4A-207ENST00000533523 CTSGP08311 255 aa11.65□□□□□ -0.54
CHMP4A-207ENST00000533523 ADMP35318 185 aa11.65□□□□□ -0.54
CHMP4A-207ENST00000533523 VWC2Q2TAL6 325 aa11.65□□□□□ -0.54
CHMP4A-207ENST00000533523 RPL7L1Q6DKI1 246 aaKnown RBP11.65□□□□□ -0.54
CHMP4A-207ENST00000533523 C20orf24Q9BUV8 137 aa11.65□□□□□ -0.54
CHMP4A-207ENST00000533523 BORCS7-ASMTA0A0B4J1R7 106 aa11.64□□□□□ -0.55
CHMP4A-207ENST00000533523 UBE2CO00762 179 aa11.64□□□□□ -0.55
CHMP4A-207ENST00000533523 RPL35AP18077 110 aaKnown RBP11.64□□□□□ -0.55
CHMP4A-207ENST00000533523 AKR1C1Q04828 323 aa11.64□□□□□ -0.55
CHMP4A-207ENST00000533523 GAMTQ14353 236 aa11.64□□□□□ -0.55
CHMP4A-207ENST00000533523 STPG3Q8N7X2 389 aa11.64□□□□□ -0.55
CHMP4A-207ENST00000533523 ACY3Q96HD9 319 aa11.64□□□□□ -0.55
CHMP4A-207ENST00000533523 ZNF471Q9BX82 626 aaPredicted RBP11.64□□□□□ -0.55
CHMP4A-207ENST00000533523 MRPL36Q9P0J6 103 aaKnown RBP11.64□□□□□ -0.55
CHMP4A-207ENST00000533523 HERC1Q15751 4861 aa11.63□□□□□ -0.55
CHMP4A-207ENST00000533523 IFNA5P01569 189 aa11.63□□□□□ -0.55
CHMP4A-207ENST00000533523 RND2P52198 227 aa11.63□□□□□ -0.55
CHMP4A-207ENST00000533523 ZNF266Q14584 549 aa11.63□□□□□ -0.55
CHMP4A-207ENST00000533523 ODF3L2Q3SX64 289 aa11.63□□□□□ -0.55
CHMP4A-207ENST00000533523 RNF183Q96D59 192 aa11.63□□□□□ -0.55
CHMP4A-207ENST00000533523 KIR2DL5BA0A0G2JN68 375 aa11.62□□□□□ -0.55
CHMP4A-207ENST00000533523 KIR2DL5BA0A0G2JPC4 375 aa11.62□□□□□ -0.55
CHMP4A-207ENST00000533523 TSPAN4O14817 238 aa11.62□□□□□ -0.55
CHMP4A-207ENST00000533523 YIF1AO95070 293 aa11.62□□□□□ -0.55
CHMP4A-207ENST00000533523 FGF7P21781 194 aa11.62□□□□□ -0.55
CHMP4A-207ENST00000533523 TMEM144Q7Z5S9 345 aa11.62□□□□□ -0.55
CHMP4A-207ENST00000533523 SLC51BQ86UW2 128 aa11.62□□□□□ -0.55
CHMP4A-207ENST00000533523 KIR2DL5AQ8N109 375 aa11.62□□□□□ -0.55
CHMP4A-207ENST00000533523 KIR2DL5BQ8NHK3 375 aa11.62□□□□□ -0.55
CHMP4A-207ENST00000533523 PHLDA1Q8WV24 401 aaPredicted RBP11.62□□□□□ -0.55
CHMP4A-207ENST00000533523 NPIPB3Q92617 1050 aa11.62□□□□□ -0.55
CHMP4A-207ENST00000533523 GINS3Q9BRX5 216 aa11.62□□□□□ -0.55
CHMP4A-207ENST00000533523 NPVFQ9HCQ7 196 aa11.62□□□□□ -0.55
CHMP4A-207ENST00000533523 WDR83OSQ9Y284 106 aa11.62□□□□□ -0.55
CHMP4A-207ENST00000533523 IGHV3OR16-8A0A075B7F1 116 aa11.61□□□□□ -0.55
CHMP4A-207ENST00000533523 OR4C46A6NHA9 309 aa11.61□□□□□ -0.55
CHMP4A-207ENST00000533523 ATF4P18848 351 aaPredicted RBP11.61□□□□□ -0.55
CHMP4A-207ENST00000533523 ZNF600Q6ZNG1 722 aa11.61□□□□□ -0.55
CHMP4A-207ENST00000533523 TMEM116Q8NCL8 245 aa11.61□□□□□ -0.55
CHMP4A-207ENST00000533523 OR4X1Q8NH49 305 aa11.61□□□□□ -0.55
CHMP4A-207ENST00000533523 SCGB1C1Q8TD33 95 aa11.61□□□□□ -0.55
CHMP4A-207ENST00000533523 PARD6GQ9BYG4 376 aaPredicted RBP11.61□□□□□ -0.55
CHMP4A-207ENST00000533523 WDR61Q9GZS3 305 aaKnown RBP11.61□□□□□ -0.55
CHMP4A-207ENST00000533523 TRAV30A0A087WSZ9 112 aa11.6□□□□□ -0.55
CHMP4A-207ENST00000533523 ZNF207O43670 478 aaKnown RBP11.6□□□□□ -0.55
CHMP4A-207ENST00000533523 CLN5O75503 358 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 278.6 ms