RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 KNCNA6PVL3 124 aa14.51□□□□□ -0.09
PAX6-228ENST00000533333 SMIM2Q9BVW6 85 aa14.51□□□□□ -0.09
PAX6-228ENST00000533333 HEATR5BQ9P2D3 2071 aa14.51□□□□□ -0.09
PAX6-228ENST00000533333 IGHV3-16A0A0C4DH30 117 aa14.51□□□□□ -0.09
PAX6-228ENST00000533333 RPUSD1Q9UJJ7 312 aaKnown RBP14.5□□□□□ -0.09
PAX6-228ENST00000533333 AKAP11Q9UKA4 1901 aa14.5□□□□□ -0.09
PAX6-228ENST00000533333 SUPT4H1P63272 117 aaKnown RBP14.5□□□□□ -0.09
PAX6-228ENST00000533333 BMPERQ8N8U9 685 aa14.5□□□□□ -0.09
PAX6-228ENST00000533333 LIME1Q9H400 295 aa14.5□□□□□ -0.09
PAX6-228ENST00000533333 OOSP1A8MZH6 123 aa14.5□□□□□ -0.09
PAX6-228ENST00000533333 FOXF2Q12947 444 aa14.5□□□□□ -0.09
PAX6-228ENST00000533333 C9orf153Q5TBE3 101 aa14.5□□□□□ -0.09
PAX6-228ENST00000533333 UBE2BP63146 152 aa14.49□□□□□ -0.09
PAX6-228ENST00000533333 hDV102S1A0JD36 115 aa14.49□□□□□ -0.09
PAX6-228ENST00000533333 NXPH4O95158 308 aa14.49□□□□□ -0.09
PAX6-228ENST00000533333 VSIRQ9H7M9 311 aa14.49□□□□□ -0.09
PAX6-228ENST00000533333 SLC25A16P16260 332 aa14.49□□□□□ -0.09
PAX6-228ENST00000533333 PSG3Q16557 428 aa14.49□□□□□ -0.09
PAX6-228ENST00000533333 TRPT1Q86TN4 253 aaKnown RBP14.49□□□□□ -0.09
PAX6-228ENST00000533333 LYZL4Q96KX0 146 aa14.49□□□□□ -0.09
PAX6-228ENST00000533333 MYO5AQ9Y4I1 1855 aaKnown RBP14.49□□□□□ -0.09
PAX6-228ENST00000533333 SMKR1H3BMG3 65 aa14.48□□□□□ -0.09
PAX6-228ENST00000533333 TREML4Q6UXN2 200 aa14.48□□□□□ -0.09
PAX6-228ENST00000533333 RPRMLQ8N4K4 120 aa14.48□□□□□ -0.09
PAX6-228ENST00000533333 SCN8AQ9UQD0 1980 aa14.48□□□□□ -0.09
PAX6-228ENST00000533333 A0A1B0GTI1 187 aa14.48□□□□□ -0.09
PAX6-228ENST00000533333 RNF222A6NCQ9 220 aa14.48□□□□□ -0.09
PAX6-228ENST00000533333 MDS2Q8NDY4 140 aa14.48□□□□□ -0.09
PAX6-228ENST00000533333 SCRT2Q9NQ03 307 aa14.48□□□□□ -0.09
PAX6-228ENST00000533333 RREB1Q92766 1687 aa14.48□□□□□ -0.09
PAX6-228ENST00000533333 C5orf64Q2M2E5 130 aa14.48□□□□□ -0.09
PAX6-228ENST00000533333 FBLIM1Q8WUP2 373 aa14.48□□□□□ -0.09
PAX6-228ENST00000533333 WDR83OSQ9Y284 106 aa14.48□□□□□ -0.09
PAX6-228ENST00000533333 A0A087X0K7 114 aa14.48□□□□□ -0.09
PAX6-228ENST00000533333 TMEM178BH3BS89 294 aa14.48□□□□□ -0.09
PAX6-228ENST00000533333 DKK1O94907 266 aa14.48□□□□□ -0.09
PAX6-228ENST00000533333 TRGV9Q99603 122 aa14.48□□□□□ -0.09
PAX6-228ENST00000533333 TGFBR3LH3BV60 316 aa14.48□□□□□ -0.09
PAX6-228ENST00000533333 UBL5Q9BZL1 73 aa14.48□□□□□ -0.09
PAX6-228ENST00000533333 RNF223E7ERA6 249 aa14.47□□□□□ -0.09
PAX6-228ENST00000533333 ZMAT4Q9H898 229 aa14.47□□□□□ -0.09
PAX6-228ENST00000533333 OVOL3O00110 214 aa14.47□□□□□ -0.09
PAX6-228ENST00000533333 SELLP14151 372 aa14.47□□□□□ -0.09
PAX6-228ENST00000533333 IFITM2Q01629 132 aa14.47□□□□□ -0.09
PAX6-228ENST00000533333 MRPL14Q6P1L8 145 aaKnown RBP14.47□□□□□ -0.09
PAX6-228ENST00000533333 UNC13CQ8NB66 2214 aa14.47□□□□□ -0.09
PAX6-228ENST00000533333 M0R1W7 72 aa14.47□□□□□ -0.09
PAX6-228ENST00000533333 CRLF1O75462 422 aa14.47□□□□□ -0.09
PAX6-228ENST00000533333 DSCR8Q96T75 97 aa14.46□□□□□ -0.09
PAX6-228ENST00000533333 CHAC1Q9BUX1 264 aa14.46□□□□□ -0.09
PAX6-228ENST00000533333 DAZ1Q9NQZ3 744 aaKnown RBP14.46□□□□□ -0.09
PAX6-228ENST00000533333 COL22A1Q8NFW1 1626 aaPredicted RBP14.46□□□□□ -0.09
PAX6-228ENST00000533333 APOC4P55056 127 aa14.46□□□□□ -0.09
PAX6-228ENST00000533333 VWC2Q2TAL6 325 aa14.46□□□□□ -0.09
PAX6-228ENST00000533333 TMEM190Q8WZ59 177 aa14.46□□□□□ -0.09
PAX6-228ENST00000533333 RNF5Q99942 180 aa14.46□□□□□ -0.09
PAX6-228ENST00000533333 GTSF1LQ9H1H1 148 aa14.46□□□□□ -0.09
PAX6-228ENST00000533333 PINLYPA6NC86 204 aa14.46□□□□□ -0.1
PAX6-228ENST00000533333 LINC01619G3V211 115 aa14.46□□□□□ -0.1
PAX6-228ENST00000533333 AZU1P20160 251 aa14.46□□□□□ -0.1
PAX6-228ENST00000533333 NEUROG3Q9Y4Z2 214 aa14.46□□□□□ -0.1
PAX6-228ENST00000533333 PAX9P55771 341 aa14.45□□□□□ -0.1
PAX6-228ENST00000533333 HEPN1Q6WQI6 88 aa14.45□□□□□ -0.1
PAX6-228ENST00000533333 SPINK8P0C7L1 97 aa14.45□□□□□ -0.1
PAX6-228ENST00000533333 Q71RC1 249 aaPredicted RBP14.45□□□□□ -0.1
PAX6-228ENST00000533333 RGPD4Q7Z3J3 1758 aa14.45□□□□□ -0.1
PAX6-228ENST00000533333 TRAV12-1A0A0B4J245 112 aa14.45□□□□□ -0.1
PAX6-228ENST00000533333 GAGE12BA1L429 117 aa14.45□□□□□ -0.1
PAX6-228ENST00000533333 GAGE7O76087 117 aa14.45□□□□□ -0.1
PAX6-228ENST00000533333 GAGE12FP0CL80 117 aa14.45□□□□□ -0.1
PAX6-228ENST00000533333 GAGE12GP0CL81 117 aa14.45□□□□□ -0.1
PAX6-228ENST00000533333 GAGE12IP0CL82 117 aa14.45□□□□□ -0.1
PAX6-228ENST00000533333 SRSF3P84103 164 aaKnown RBP14.45□□□□□ -0.1
PAX6-228ENST00000533333 GAGE6Q13070 117 aa14.45□□□□□ -0.1
PAX6-228ENST00000533333 MIA3Q5JRA6 1907 aa14.45□□□□□ -0.1
PAX6-228ENST00000533333 SCN7AQ01118 1682 aa14.45□□□□□ -0.1
PAX6-228ENST00000533333 MBD3L4A6NDZ8 208 aaPredicted RBP14.45□□□□□ -0.1
PAX6-228ENST00000533333 MBD3L3A6NE82 208 aaPredicted RBP14.45□□□□□ -0.1
PAX6-228ENST00000533333 MBD3L5A6NJ08 208 aaPredicted RBP14.45□□□□□ -0.1
PAX6-228ENST00000533333 BUB1B-PAK6H3BSN5 160 aa14.45□□□□□ -0.1
PAX6-228ENST00000533333 UNQ6494/PRO21346Q6UXR6 183 aa14.45□□□□□ -0.1
PAX6-228ENST00000533333 MBD3L2Q8NHZ7 208 aaPredicted RBP14.45□□□□□ -0.1
PAX6-228ENST00000533333 RNF126Q9BV68 326 aa14.45□□□□□ -0.1
PAX6-228ENST00000533333 RFNGQ9Y644 331 aa14.45□□□□□ -0.1
PAX6-228ENST00000533333 CHKB-CPT1BH3BT56 60 aa14.44□□□□□ -0.1
PAX6-228ENST00000533333 SP5Q6BEB4 398 aaPredicted RBP14.44□□□□□ -0.1
PAX6-228ENST00000533333 PRSS29PA6NIE9 313 aa14.44□□□□□ -0.1
PAX6-228ENST00000533333 HIST1H2BKO60814 126 aa14.44□□□□□ -0.1
PAX6-228ENST00000533333 IL18BPO95998 194 aa14.44□□□□□ -0.1
PAX6-228ENST00000533333 HIST1H2BJP06899 126 aa14.44□□□□□ -0.1
PAX6-228ENST00000533333 HIST1H2BOP23527 126 aa14.44□□□□□ -0.1
PAX6-228ENST00000533333 HIST1H2BBP33778 126 aa14.44□□□□□ -0.1
PAX6-228ENST00000533333 HIST1H2BDP58876 126 aa14.44□□□□□ -0.1
PAX6-228ENST00000533333 HIST1H2BCP62807 126 aa14.44□□□□□ -0.1
PAX6-228ENST00000533333 TCF15Q12870 199 aa14.44□□□□□ -0.1
PAX6-228ENST00000533333 HIST2H2BEQ16778 126 aa14.44□□□□□ -0.1
PAX6-228ENST00000533333 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.44□□□□□ -0.1
PAX6-228ENST00000533333 HIST1H2BHQ93079 126 aa14.44□□□□□ -0.1
PAX6-228ENST00000533333 HIST1H2BNQ99877 126 aa14.44□□□□□ -0.1
PAX6-228ENST00000533333 HIST1H2BMQ99879 126 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms