RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 ADTRPQ96IZ2 230 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 HARBI1Q96MB7 349 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 ZNF714Q96N38 554 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 PLEKHA3Q9HB20 300 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 SLC45A2Q9UMX9 530 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 FUT9Q9Y231 359 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 U3KQK5 164 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 PPP5D1E7EU14 171 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 S100A2P29034 98 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 HOXD3P31249 432 aaPredicted RBP6.43□□□□□ -1.38
NEDD8-207ENST00000533242 RTL8BQ17RB0 113 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 TCTEX1D4Q5JR98 221 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 C9orf152Q5JTZ5 239 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 ASPHD1Q5U4P2 390 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 C19orf35Q6ZS72 473 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 TMEM144Q7Z5S9 345 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 OR5AN1Q8NGI8 311 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 OR2T10Q8NGZ9 312 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 OR5B12Q96R08 314 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 ENY2Q9NPA8 101 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 MRPL36Q9P0J6 103 aaKnown RBP6.43□□□□□ -1.38
NEDD8-207ENST00000533242 PRNDQ9UKY0 176 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 ZNF257Q9Y2Q1 563 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 IGHV3-72A0A0B4J1Y9 119 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 LY86O95711 162 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 RBP4P02753 201 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 AMBPP02760 352 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 OR10J1P30954 320 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 DLX6P56179 175 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 WT1-ASQ06250 92 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 MRGPRG-AS1Q2M3A8 158 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 ACTL10Q5JWF8 245 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 LINC00482Q8N8I6 264 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 OR11H6Q8NGC7 330 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 ST6GALNAC6Q969X2 333 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 ANAPC16Q96DE5 110 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 SFRP2Q96HF1 295 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 NABP2Q9BQ15 211 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 FNDC4Q9H6D8 234 aaPredicted RBP6.43□□□□□ -1.38
NEDD8-207ENST00000533242 NDUFA4L2Q9NRX3 87 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 BET1LQ9NYM9 111 aa6.43□□□□□ -1.38
NEDD8-207ENST00000533242 ZMAT5Q9UDW3 170 aaKnown RBP6.43□□□□□ -1.38
NEDD8-207ENST00000533242 ELOA3CA0A087WX78 387 aaPredicted RBP6.42□□□□□ -1.38
NEDD8-207ENST00000533242 SLC17A3O00476 420 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 NDUFS6O75380 124 aaKnown RBP6.42□□□□□ -1.38
NEDD8-207ENST00000533242 IGLV2-23P01705 113 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 OR10J4P0C629 311 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 SSX2Q16385 188 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 OR4X2Q8NGF9 303 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 PACRGQ96M98 296 aaPredicted RBP6.42□□□□□ -1.38
NEDD8-207ENST00000533242 MCRIP2Q9BUT9 160 aaKnown RBP6.42□□□□□ -1.38
NEDD8-207ENST00000533242 GAL3ST2Q9H3Q3 398 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 RAB9BQ9NP90 201 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 TRAV5A0A0B4J249 113 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 XKRY2A2RUG3 117 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 GGTLC3B5MD39 225 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 F6UZH7 168 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 TYMSP04818 313 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 REG1AP05451 166 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 SNRPCP09234 159 aaKnown RBP6.42□□□□□ -1.38
NEDD8-207ENST00000533242 RHOBP62745 196 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 MEF2CQ06413 473 aaPredicted RBP6.42□□□□□ -1.38
NEDD8-207ENST00000533242 OR5I1Q13606 314 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 PSG5Q15238 335 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 C2orf83Q53S99 150 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 LDLRAD2Q5SZI1 272 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 MINOS1Q5TGZ0 78 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 TEX38Q6PEX7 206 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 TMEM183AQ8IXX5 376 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 OR1P1Q8NH06 330 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 MINOS1-NBL1R4GNA1 71 aa6.42□□□□□ -1.38
NEDD8-207ENST00000533242 TENM3Q9P273 2699 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 PSMB11A5LHX3 300 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 NUPR1O60356 82 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 APELAP0DMC3 54 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 CNTFRP26992 372 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 RPL8P62917 257 aaKnown RBP6.41□□□□□ -1.38
NEDD8-207ENST00000533242 TMEM177Q53S58 311 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 FAM209BQ5JX69 171 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 OR5B3Q8NH48 314 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 OSR1Q8TAX0 266 aaPredicted RBP6.41□□□□□ -1.38
NEDD8-207ENST00000533242 ACY3Q96HD9 319 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 ZNF430Q9H8G1 570 aaPredicted RBP6.41□□□□□ -1.38
NEDD8-207ENST00000533242 ZNF320A2RRD8 509 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 TGOLN2O43493 480 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 SLC25A17O43808 307 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 HIST1H1BP16401 226 aaKnown RBP6.41□□□□□ -1.38
NEDD8-207ENST00000533242 CRYBB3P26998 211 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 ZNF90Q03938 601 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 COA6Q5JTJ3 125 aaKnown RBP6.41□□□□□ -1.38
NEDD8-207ENST00000533242 MRPL41Q8IXM3 137 aaKnown RBP6.41□□□□□ -1.38
NEDD8-207ENST00000533242 OR1L8Q8NGR8 309 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 OR10X1Q8NGY0 326 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 C11orf52Q96A22 123 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 FLYWCH2Q96CP2 140 aaKnown RBP6.41□□□□□ -1.38
NEDD8-207ENST00000533242 UHRF2Q96PU4 802 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 DMRT1Q9Y5R6 373 aa6.41□□□□□ -1.38
NEDD8-207ENST00000533242 IGKV1D-37A0A075B6S9 117 aa6.4□□□□□ -1.38
NEDD8-207ENST00000533242 APOA2P02652 100 aa6.4□□□□□ -1.38
NEDD8-207ENST00000533242 IGHV1-8P0DP01 117 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms