RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 ZNF90Q03938 601 aa13.9□□□□□ -0.18
SSH3-209ENST00000532600 TRAV30A0A087WSZ9 112 aa13.89□□□□□ -0.19
SSH3-209ENST00000532600 E5RGE8 158 aa13.89□□□□□ -0.19
SSH3-209ENST00000532600 DLK1P80370 383 aa13.89□□□□□ -0.19
SSH3-209ENST00000532600 Q6ZNX1 250 aa13.89□□□□□ -0.19
SSH3-209ENST00000532600 OR10P1Q8NGE3 313 aa13.89□□□□□ -0.19
SSH3-209ENST00000532600 CSTL1Q9H114 145 aa13.89□□□□□ -0.19
SSH3-209ENST00000532600 MBD2Q9UBB5 411 aa13.89□□□□□ -0.19
SSH3-209ENST00000532600 U3KQE9 123 aa13.89□□□□□ -0.19
SSH3-209ENST00000532600 GIPP09681 153 aaPredicted RBP13.88□□□□□ -0.19
SSH3-209ENST00000532600 NPPCP23582 126 aa13.88□□□□□ -0.19
SSH3-209ENST00000532600 P2RY1P47900 373 aa13.88□□□□□ -0.19
SSH3-209ENST00000532600 CMC4P56277 68 aaPredicted RBP13.88□□□□□ -0.19
SSH3-209ENST00000532600 DEFB131AP59861 70 aa13.88□□□□□ -0.19
SSH3-209ENST00000532600 YPEL3P61236 119 aaPredicted RBP13.88□□□□□ -0.19
SSH3-209ENST00000532600 PMS2P11Q13670 270 aa13.88□□□□□ -0.19
SSH3-209ENST00000532600 LEMD1Q68G75 181 aa13.88□□□□□ -0.19
SSH3-209ENST00000532600 TMEM182Q6ZP80 229 aaPredicted RBP13.88□□□□□ -0.19
SSH3-209ENST00000532600 TMEM217Q8N7C4 229 aa13.88□□□□□ -0.19
SSH3-209ENST00000532600 TRAV2A0A0B4J234 112 aa13.87□□□□□ -0.19
SSH3-209ENST00000532600 ZFP92A6NM28 416 aa13.87□□□□□ -0.19
SSH3-209ENST00000532600 G3V3Q6 166 aa13.87□□□□□ -0.19
SSH3-209ENST00000532600 K7EQG2 157 aa13.87□□□□□ -0.19
SSH3-209ENST00000532600 JTBO76095 146 aa13.87□□□□□ -0.19
SSH3-209ENST00000532600 TOMM40O96008 361 aa13.87□□□□□ -0.19
SSH3-209ENST00000532600 RLN2P04090 185 aa13.87□□□□□ -0.19
SSH3-209ENST00000532600 CD5P06127 495 aa13.87□□□□□ -0.19
SSH3-209ENST00000532600 SULT1A1P50225 295 aa13.87□□□□□ -0.19
SSH3-209ENST00000532600 PAFAH1B2P68402 229 aa13.87□□□□□ -0.19
SSH3-209ENST00000532600 NHLH2Q02577 135 aa13.87□□□□□ -0.19
SSH3-209ENST00000532600 SLC38A11Q08AI6 406 aa13.87□□□□□ -0.19
SSH3-209ENST00000532600 METTL26Q96S19 204 aa13.87□□□□□ -0.19
SSH3-209ENST00000532600 TRGV9Q99603 122 aa13.87□□□□□ -0.19
SSH3-209ENST00000532600 SMCO3A2RU48 225 aa13.86□□□□□ -0.19
SSH3-209ENST00000532600 DNASE2O00115 360 aaPredicted RBP13.86□□□□□ -0.19
SSH3-209ENST00000532600 RD3LP0DJH9 198 aa13.86□□□□□ -0.19
SSH3-209ENST00000532600 PSG1P11464 419 aa13.86□□□□□ -0.19
SSH3-209ENST00000532600 ATF4P18848 351 aaPredicted RBP13.86□□□□□ -0.19
SSH3-209ENST00000532600 AKR1C1Q04828 323 aa13.86□□□□□ -0.19
SSH3-209ENST00000532600 TMEM144Q7Z5S9 345 aa13.86□□□□□ -0.19
SSH3-209ENST00000532600 GGACTQ9BVM4 153 aa13.86□□□□□ -0.19
SSH3-209ENST00000532600 AGRNO00468 2067 aa13.86□□□□□ -0.19
SSH3-209ENST00000532600 CXorf65A6NEN9 183 aa13.85□□□□□ -0.19
SSH3-209ENST00000532600 FNDC10F2Z333 226 aa13.85□□□□□ -0.19
SSH3-209ENST00000532600 GIG44P09565 113 aaPredicted RBP13.85□□□□□ -0.19
SSH3-209ENST00000532600 GATA2P23769 480 aaPredicted RBP13.85□□□□□ -0.19
SSH3-209ENST00000532600 RPL11P62913 178 aaKnown RBP13.85□□□□□ -0.19
SSH3-209ENST00000532600 OR2F1Q13607 317 aa13.85□□□□□ -0.19
SSH3-209ENST00000532600 USF2Q15853 346 aaPredicted RBP13.85□□□□□ -0.19
SSH3-209ENST00000532600 DCANP1Q8TF63 244 aa13.85□□□□□ -0.19
SSH3-209ENST00000532600 RABAC1Q9UI14 185 aa13.85□□□□□ -0.19
SSH3-209ENST00000532600 A0A1W2PS18 150 aa13.84□□□□□ -0.19
SSH3-209ENST00000532600 SCGB2A1O75556 95 aa13.84□□□□□ -0.19
SSH3-209ENST00000532600 RAP2BP61225 183 aa13.84□□□□□ -0.19
SSH3-209ENST00000532600 VWC2Q2TAL6 325 aa13.84□□□□□ -0.19
SSH3-209ENST00000532600 STX12Q86Y82 276 aa13.84□□□□□ -0.19
SSH3-209ENST00000532600 STXBP6Q8NFX7 210 aa13.84□□□□□ -0.19
SSH3-209ENST00000532600 Q8WTZ3 238 aa13.84□□□□□ -0.19
SSH3-209ENST00000532600 GLMPQ8WWB7 406 aa13.84□□□□□ -0.19
SSH3-209ENST00000532600 TMEM231Q9H6L2 316 aa13.84□□□□□ -0.19
SSH3-209ENST00000532600 IL4P05112 153 aa13.83□□□□□ -0.2
SSH3-209ENST00000532600 PET100P0DJ07 73 aa13.83□□□□□ -0.2
SSH3-209ENST00000532600 CEMP1Q6PRD7 247 aaPredicted RBP13.83□□□□□ -0.2
SSH3-209ENST00000532600 C16orf54Q6UWD8 224 aa13.83□□□□□ -0.2
SSH3-209ENST00000532600 OR51G1Q8NGK1 321 aa13.83□□□□□ -0.2
SSH3-209ENST00000532600 GATAD1Q8WUU5 269 aa13.83□□□□□ -0.2
SSH3-209ENST00000532600 ASB13Q8WXK3 278 aa13.83□□□□□ -0.2
SSH3-209ENST00000532600 LINC00476Q8WZB0 136 aa13.83□□□□□ -0.2
SSH3-209ENST00000532600 NPVFQ9HCQ7 196 aa13.83□□□□□ -0.2
SSH3-209ENST00000532600 SMLR1H3BR10 107 aa13.82□□□□□ -0.2
SSH3-209ENST00000532600 CA1P00915 261 aaPredicted RBP13.82□□□□□ -0.2
SSH3-209ENST00000532600 S100A11P31949 105 aa13.82□□□□□ -0.2
SSH3-209ENST00000532600 OR5C1Q8NGR4 320 aa13.82□□□□□ -0.2
SSH3-209ENST00000532600 MGST2Q99735 147 aa13.82□□□□□ -0.2
SSH3-209ENST00000532600 RARRES2Q99969 163 aa13.82□□□□□ -0.2
SSH3-209ENST00000532600 TMEM147Q9BVK8 224 aa13.82□□□□□ -0.2
SSH3-209ENST00000532600 SLC25A31Q9H0C2 315 aa13.82□□□□□ -0.2
SSH3-209ENST00000532600 UQCC1Q9NVA1 299 aa13.82□□□□□ -0.2
SSH3-209ENST00000532600 NUPR2A6NF83 97 aa13.81□□□□□ -0.2
SSH3-209ENST00000532600 KNCNA6PVL3 124 aa13.81□□□□□ -0.2
SSH3-209ENST00000532600 HNRNPCP07910 306 aaKnown RBP eCLIP13.81□□□□□ -0.2
SSH3-209ENST00000532600 ZNF688P0C7X2 276 aa13.81□□□□□ -0.2
SSH3-209ENST00000532600 RPL12P30050 165 aaKnown RBP13.81□□□□□ -0.2
SSH3-209ENST00000532600 CYP2G1PQ6ZSU1 146 aa13.81□□□□□ -0.2
SSH3-209ENST00000532600 TRPT1Q86TN4 253 aaKnown RBP13.81□□□□□ -0.2
SSH3-209ENST00000532600 OR2T35Q8NGX2 323 aa13.81□□□□□ -0.2
SSH3-209ENST00000532600 OR11H2Q8NH07 326 aa13.81□□□□□ -0.2
SSH3-209ENST00000532600 THAP6Q8TBB0 222 aa13.81□□□□□ -0.2
SSH3-209ENST00000532600 RNF125Q96EQ8 232 aa13.81□□□□□ -0.2
SSH3-209ENST00000532600 GRAMD2BQ96HH9 432 aa13.81□□□□□ -0.2
SSH3-209ENST00000532600 WDR83OSQ9Y284 106 aa13.81□□□□□ -0.2
SSH3-209ENST00000532600 HSPB11Q9Y547 144 aa13.81□□□□□ -0.2
SSH3-209ENST00000532600 UBE2L5PA0A1B0GUS4 154 aa13.8□□□□□ -0.2
SSH3-209ENST00000532600 HBG1P69891 147 aa13.8□□□□□ -0.2
SSH3-209ENST00000532600 HBG2P69892 147 aa13.8□□□□□ -0.2
SSH3-209ENST00000532600 BAXQ07812 192 aa13.8□□□□□ -0.2
SSH3-209ENST00000532600 CLINT1Q14677 625 aa13.8□□□□□ -0.2
SSH3-209ENST00000532600 TEPPQ6URK8 271 aa13.8□□□□□ -0.2
SSH3-209ENST00000532600 WFDC1Q9HC57 220 aa13.8□□□□□ -0.2
SSH3-209ENST00000532600 SLC45A2Q9UMX9 530 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms