RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 X6R8D5 127 aa16.15■□□□□ 0.18
TRAPPC4-210ENST00000531290 KMT2AQ03164 3969 aa16.14■□□□□ 0.17
TRAPPC4-210ENST00000531290 TRAV6A0A075B6T7 132 aa16.14■□□□□ 0.17
TRAPPC4-210ENST00000531290 HLA-DMBP28068 263 aa16.14■□□□□ 0.17
TRAPPC4-210ENST00000531290 OR8G2PQ6IF36 304 aa16.14■□□□□ 0.17
TRAPPC4-210ENST00000531290 CSNK1G2-AS1Q8NCQ2 148 aa16.14■□□□□ 0.17
TRAPPC4-210ENST00000531290 MAGT1Q9H0U3 335 aa16.14■□□□□ 0.17
TRAPPC4-210ENST00000531290 NUDT15Q9NV35 164 aa16.14■□□□□ 0.17
TRAPPC4-210ENST00000531290 H3BMM0 161 aa16.13■□□□□ 0.17
TRAPPC4-210ENST00000531290 ZNF90Q03938 601 aa16.13■□□□□ 0.17
TRAPPC4-210ENST00000531290 MITD1Q8WV92 249 aa16.13■□□□□ 0.17
TRAPPC4-210ENST00000531290 SNRPGP15A8MWD9 76 aa16.12■□□□□ 0.17
TRAPPC4-210ENST00000531290 NKX2-1P43699 371 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC4-210ENST00000531290 XCL2Q9UBD3 114 aa16.12■□□□□ 0.17
TRAPPC4-210ENST00000531290 VPS13DQ5THJ4 4388 aa16.11■□□□□ 0.17
TRAPPC4-210ENST00000531290 ELOA3CA0A087WX78 387 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC4-210ENST00000531290 TRAV10A0A0B4J240 114 aa16.11■□□□□ 0.17
TRAPPC4-210ENST00000531290 H2AFB2P0C5Z0 115 aa16.11■□□□□ 0.17
TRAPPC4-210ENST00000531290 ID1P41134 155 aa16.11■□□□□ 0.17
TRAPPC4-210ENST00000531290 LYZP61626 148 aa16.11■□□□□ 0.17
TRAPPC4-210ENST00000531290 PPP1R14BQ96C90 147 aa16.11■□□□□ 0.17
TRAPPC4-210ENST00000531290 LINC00052Q96N35 136 aa16.11■□□□□ 0.17
TRAPPC4-210ENST00000531290 APLNQ9ULZ1 77 aa16.11■□□□□ 0.17
TRAPPC4-210ENST00000531290 IGKV1D-37A0A075B6S9 117 aa16.1■□□□□ 0.17
TRAPPC4-210ENST00000531290 UPK1BO75841 260 aa16.1■□□□□ 0.17
TRAPPC4-210ENST00000531290 ASAH1Q13510 395 aa16.1■□□□□ 0.17
TRAPPC4-210ENST00000531290 IAH1Q2TAA2 248 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC4-210ENST00000531290 SPANXN5Q5MJ07 72 aa16.1■□□□□ 0.17
TRAPPC4-210ENST00000531290 C1orf194Q5T5A4 169 aa16.1■□□□□ 0.17
TRAPPC4-210ENST00000531290 Q6ZTC4 211 aa16.1■□□□□ 0.17
TRAPPC4-210ENST00000531290 GSKIPQ9P0R6 139 aa16.1■□□□□ 0.17
TRAPPC4-210ENST00000531290 STRAPQ9Y3F4 350 aaKnown RBP16.1■□□□□ 0.17
TRAPPC4-210ENST00000531290 DNAH10Q8IVF4 4471 aa16.1■□□□□ 0.17
TRAPPC4-210ENST00000531290 HLA-DRB4P13762 266 aa16.09■□□□□ 0.17
TRAPPC4-210ENST00000531290 ID3Q02535 119 aa16.09■□□□□ 0.17
TRAPPC4-210ENST00000531290 OR2F1Q13607 317 aa16.09■□□□□ 0.17
TRAPPC4-210ENST00000531290 ENKURQ8TC29 256 aa16.09■□□□□ 0.17
TRAPPC4-210ENST00000531290 HLA-DRB4X5D2U9 266 aa16.09■□□□□ 0.17
TRAPPC4-210ENST00000531290 SCGB1D2O95969 90 aa16.08■□□□□ 0.16
TRAPPC4-210ENST00000531290 POLR2GP62487 172 aaKnown RBP eCLIP16.08■□□□□ 0.16
TRAPPC4-210ENST00000531290 ZNF431Q8TF32 576 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC4-210ENST00000531290 TRGV9Q99603 122 aa16.08■□□□□ 0.16
TRAPPC4-210ENST00000531290 SSSCA1O60232 199 aa16.07■□□□□ 0.16
TRAPPC4-210ENST00000531290 IGKV3-20P01619 116 aa16.07■□□□□ 0.16
TRAPPC4-210ENST00000531290 PRR20EP86478 221 aa16.07■□□□□ 0.16
TRAPPC4-210ENST00000531290 PRR20CP86479 221 aa16.07■□□□□ 0.16
TRAPPC4-210ENST00000531290 PRR20DP86480 221 aa16.07■□□□□ 0.16
TRAPPC4-210ENST00000531290 PRR20BP86481 221 aa16.07■□□□□ 0.16
TRAPPC4-210ENST00000531290 PRR20AP86496 221 aa16.07■□□□□ 0.16
TRAPPC4-210ENST00000531290 OR8I2Q8N0Y5 310 aa16.07■□□□□ 0.16
TRAPPC4-210ENST00000531290 OR4D5Q8NGN0 318 aa16.07■□□□□ 0.16
TRAPPC4-210ENST00000531290 PSENENQ9NZ42 101 aa16.07■□□□□ 0.16
TRAPPC4-210ENST00000531290 FAM25EA8MYX2 175 aa16.06■□□□□ 0.16
TRAPPC4-210ENST00000531290 CFDP00746 253 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC4-210ENST00000531290 PSMB3P49720 205 aa16.06■□□□□ 0.16
TRAPPC4-210ENST00000531290 C12orf45Q8N5I9 185 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC4-210ENST00000531290 FRAS1Q86XX4 4008 aa16.05■□□□□ 0.16
TRAPPC4-210ENST00000531290 C5orf51A6NDU8 294 aa16.05■□□□□ 0.16
TRAPPC4-210ENST00000531290 H3BP45 60 aa16.05■□□□□ 0.16
TRAPPC4-210ENST00000531290 DEFA1P59665 94 aa16.05■□□□□ 0.16
TRAPPC4-210ENST00000531290 DEFA3P59666 94 aa16.05■□□□□ 0.16
TRAPPC4-210ENST00000531290 GDF5OSQ5U4N7 250 aa16.05■□□□□ 0.16
TRAPPC4-210ENST00000531290 FOXI2Q6ZQN5 318 aa16.05■□□□□ 0.16
TRAPPC4-210ENST00000531290 THAP8Q8NA92 274 aa16.05■□□□□ 0.16
TRAPPC4-210ENST00000531290 ZBTB8BQ8NAP8 495 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC4-210ENST00000531290 SEC22CQ9BRL7 303 aa16.05■□□□□ 0.16
TRAPPC4-210ENST00000531290 SAV1Q9H4B6 383 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC4-210ENST00000531290 GPN1Q9HCN4 374 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC4-210ENST00000531290 CELA1Q9UNI1 258 aa16.05■□□□□ 0.16
TRAPPC4-210ENST00000531290 IGHV4-4A0A075B6R2 117 aa16.04■□□□□ 0.16
TRAPPC4-210ENST00000531290 DEFB1P60022 68 aa16.04■□□□□ 0.16
TRAPPC4-210ENST00000531290 C12orf74Q32Q52 190 aa16.04■□□□□ 0.16
TRAPPC4-210ENST00000531290 SAMD13Q5VXD3 122 aa16.04■□□□□ 0.16
TRAPPC4-210ENST00000531290 ZNF767PQ75MW2 155 aa16.04■□□□□ 0.16
TRAPPC4-210ENST00000531290 OR4B1Q8NGF8 309 aa16.04■□□□□ 0.16
TRAPPC4-210ENST00000531290 SMIM8Q96KF7 97 aa16.04■□□□□ 0.16
TRAPPC4-210ENST00000531290 RNF126Q9BV68 326 aa16.04■□□□□ 0.16
TRAPPC4-210ENST00000531290 DEFB131BA0A096LNP1 70 aa16.03■□□□□ 0.16
TRAPPC4-210ENST00000531290 ISLRO14498 428 aa16.03■□□□□ 0.16
TRAPPC4-210ENST00000531290 FXYD7P58549 80 aa16.03■□□□□ 0.16
TRAPPC4-210ENST00000531290 SPATA31B1PQ5VZV4 182 aa16.03■□□□□ 0.16
TRAPPC4-210ENST00000531290 EBLN2Q6P2I7 272 aa16.03■□□□□ 0.16
TRAPPC4-210ENST00000531290 NEU1Q99519 415 aa16.03■□□□□ 0.16
TRAPPC4-210ENST00000531290 IGHV3OR16-12A0A075B7B8 117 aa16.02■□□□□ 0.16
TRAPPC4-210ENST00000531290 IGKV1OR2-108A0A075B7D4 117 aa16.02■□□□□ 0.16
TRAPPC4-210ENST00000531290 SMIM9A6NGZ8 99 aa16.02■□□□□ 0.16
TRAPPC4-210ENST00000531290 L7N2F9 121 aa16.02■□□□□ 0.16
TRAPPC4-210ENST00000531290 SOCS3O14543 225 aa16.02■□□□□ 0.16
TRAPPC4-210ENST00000531290 GALR1P47211 349 aa16.02■□□□□ 0.16
TRAPPC4-210ENST00000531290 VAMP2P63027 116 aa16.02■□□□□ 0.16
TRAPPC4-210ENST00000531290 AKR1C1Q04828 323 aa16.02■□□□□ 0.16
TRAPPC4-210ENST00000531290 ZNF705AQ6ZN79 300 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC4-210ENST00000531290 CLUHP3Q96NS8 147 aa16.02■□□□□ 0.16
TRAPPC4-210ENST00000531290 AGRNO00468 2067 aa16.02■□□□□ 0.15
TRAPPC4-210ENST00000531290 TMEM189A5PLL7 270 aa16.01■□□□□ 0.15
TRAPPC4-210ENST00000531290 CCSO14618 274 aa16.01■□□□□ 0.15
TRAPPC4-210ENST00000531290 IL5P05113 134 aa16.01■□□□□ 0.15
TRAPPC4-210ENST00000531290 SPART-AS1P0CW21 52 aa16.01■□□□□ 0.15
TRAPPC4-210ENST00000531290 S100A7P31151 101 aa16.01■□□□□ 0.15
TRAPPC4-210ENST00000531290 MEOX2P50222 304 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms