RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 A0A1B0GW15 77 aa11.4□□□□□ -0.58
PCF11-204ENST00000530660 PCNX2A6NKB5 2137 aa11.4□□□□□ -0.58
PCF11-204ENST00000530660 RFPL3SP0C7P2 107 aa11.4□□□□□ -0.58
PCF11-204ENST00000530660 ITLN1Q8WWA0 313 aa11.4□□□□□ -0.58
PCF11-204ENST00000530660 PKIBQ9C010 78 aa11.4□□□□□ -0.58
PCF11-204ENST00000530660 HIF1ANQ9NWT6 349 aa11.4□□□□□ -0.58
PCF11-204ENST00000530660 TNRC6BQ9UPQ9 1833 aaKnown RBP11.4□□□□□ -0.58
PCF11-204ENST00000530660 ABCA1O95477 2261 aa11.4□□□□□ -0.58
PCF11-204ENST00000530660 PRSS29PA6NIE9 313 aa11.4□□□□□ -0.59
PCF11-204ENST00000530660 WNT9BO14905 357 aa11.4□□□□□ -0.59
PCF11-204ENST00000530660 ERVK11-1P61568 191 aa11.4□□□□□ -0.59
PCF11-204ENST00000530660 RPL32P62910 135 aaKnown RBP11.4□□□□□ -0.59
PCF11-204ENST00000530660 PAXXQ9BUH6 204 aa11.4□□□□□ -0.59
PCF11-204ENST00000530660 OOEPA6NGQ2 149 aa11.39□□□□□ -0.59
PCF11-204ENST00000530660 SSR4P51571 173 aa11.39□□□□□ -0.59
PCF11-204ENST00000530660 OR13A1Q8NGR1 328 aa11.39□□□□□ -0.59
PCF11-204ENST00000530660 COQ2Q96H96 371 aa11.39□□□□□ -0.59
PCF11-204ENST00000530660 PRELID3AQ96N28 172 aa11.39□□□□□ -0.59
PCF11-204ENST00000530660 ENY2Q9NPA8 101 aa11.39□□□□□ -0.59
PCF11-204ENST00000530660 INTS1Q8N201 2190 aaKnown RBP11.39□□□□□ -0.59
PCF11-204ENST00000530660 SLC25A5P05141 298 aaKnown RBP11.39□□□□□ -0.59
PCF11-204ENST00000530660 KLRD1Q13241 179 aa11.39□□□□□ -0.59
PCF11-204ENST00000530660 CXorf67Q86X51 503 aaPredicted RBP11.39□□□□□ -0.59
PCF11-204ENST00000530660 ZNF502Q8TBZ5 544 aa11.39□□□□□ -0.59
PCF11-204ENST00000530660 PRB4P10163 310 aaPredicted RBP11.38□□□□□ -0.59
PCF11-204ENST00000530660 POLDIP2Q9Y2S7 368 aa11.38□□□□□ -0.59
PCF11-204ENST00000530660 H3BTX0 84 aa11.38□□□□□ -0.59
PCF11-204ENST00000530660 GRPP07492 148 aa11.38□□□□□ -0.59
PCF11-204ENST00000530660 ZNF146Q15072 292 aa11.38□□□□□ -0.59
PCF11-204ENST00000530660 RPRMLQ8N4K4 120 aa11.38□□□□□ -0.59
PCF11-204ENST00000530660 DAZAP1Q96EP5 407 aaKnown RBP11.38□□□□□ -0.59
PCF11-204ENST00000530660 SOX21Q9Y651 276 aaPredicted RBP11.38□□□□□ -0.59
PCF11-204ENST00000530660 TRGV8A0A0C4DH27 118 aa11.38□□□□□ -0.59
PCF11-204ENST00000530660 CLEC3BP05452 202 aa11.38□□□□□ -0.59
PCF11-204ENST00000530660 ARMS2P0C7Q2 107 aa11.38□□□□□ -0.59
PCF11-204ENST00000530660 MLST8Q9BVC4 326 aa11.38□□□□□ -0.59
PCF11-204ENST00000530660 NAV3Q8IVL0 2385 aa11.38□□□□□ -0.59
PCF11-204ENST00000530660 TRBV25-1A0A075B6N4 114 aa11.37□□□□□ -0.59
PCF11-204ENST00000530660 IGHV3-48P01763 117 aa11.37□□□□□ -0.59
PCF11-204ENST00000530660 SSBP2P81877 361 aaPredicted RBP11.37□□□□□ -0.59
PCF11-204ENST00000530660 SRSF6Q13247 344 aaKnown RBP11.37□□□□□ -0.59
PCF11-204ENST00000530660 CEND1Q8N111 149 aa11.37□□□□□ -0.59
PCF11-204ENST00000530660 C19orf71A6NCJ1 209 aa11.37□□□□□ -0.59
PCF11-204ENST00000530660 C15orf61A6NNL5 157 aa11.37□□□□□ -0.59
PCF11-204ENST00000530660 SRRM4A7MD48 611 aaKnown RBP11.37□□□□□ -0.59
PCF11-204ENST00000530660 DNPH1O43598 174 aa11.37□□□□□ -0.59
PCF11-204ENST00000530660 EPDR1Q9UM22 224 aa11.37□□□□□ -0.59
PCF11-204ENST00000530660 IGHV1-45A0A0A0MS14 117 aa11.37□□□□□ -0.59
PCF11-204ENST00000530660 PGPA6NDG6 321 aa11.37□□□□□ -0.59
PCF11-204ENST00000530660 FAM90A9PA6NNJ1 464 aa11.37□□□□□ -0.59
PCF11-204ENST00000530660 PTH2Q96A98 100 aa11.37□□□□□ -0.59
PCF11-204ENST00000530660 MRPL33O75394 65 aaKnown RBP11.36□□□□□ -0.59
PCF11-204ENST00000530660 HSPE1P61604 102 aaKnown RBP11.36□□□□□ -0.59
PCF11-204ENST00000530660 MRPL14Q6P1L8 145 aaKnown RBP11.36□□□□□ -0.59
PCF11-204ENST00000530660 ZNF826PQ6ZT77 177 aa11.36□□□□□ -0.59
PCF11-204ENST00000530660 TPPP3Q9BW30 176 aa11.36□□□□□ -0.59
PCF11-204ENST00000530660 METRNQ9UJH8 293 aa11.36□□□□□ -0.59
PCF11-204ENST00000530660 TRAV8-1A0A0A6YYK1 113 aa11.36□□□□□ -0.59
PCF11-204ENST00000530660 LINC01548A6NM66 108 aa11.36□□□□□ -0.59
PCF11-204ENST00000530660 VSTM5A8MXK1 200 aa11.36□□□□□ -0.59
PCF11-204ENST00000530660 SS18L1O75177 396 aaPredicted RBP11.36□□□□□ -0.59
PCF11-204ENST00000530660 NHLRC4P0CG21 123 aaPredicted RBP11.36□□□□□ -0.59
PCF11-204ENST00000530660 COL8A1P27658 744 aa11.36□□□□□ -0.59
PCF11-204ENST00000530660 C12orf74Q32Q52 190 aa11.36□□□□□ -0.59
PCF11-204ENST00000530660 C1orf229Q6ZS94 237 aaPredicted RBP11.36□□□□□ -0.59
PCF11-204ENST00000530660 RPS19BP1Q86WX3 136 aaKnown RBP11.36□□□□□ -0.59
PCF11-204ENST00000530660 IFI27L1Q96BM0 104 aa11.36□□□□□ -0.59
PCF11-204ENST00000530660 ASCL2Q99929 193 aa11.36□□□□□ -0.59
PCF11-204ENST00000530660 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.35□□□□□ -0.59
PCF11-204ENST00000530660 HAX1O00165 279 aa11.35□□□□□ -0.59
PCF11-204ENST00000530660 SMCPP49901 116 aaPredicted RBP11.35□□□□□ -0.59
PCF11-204ENST00000530660 Q6AWC8 147 aa11.35□□□□□ -0.59
PCF11-204ENST00000530660 ZNF562Q6V9R5 426 aa11.35□□□□□ -0.59
PCF11-204ENST00000530660 CIARTQ8N365 385 aaPredicted RBP11.35□□□□□ -0.59
PCF11-204ENST00000530660 FXYD5Q96DB9 178 aa11.35□□□□□ -0.59
PCF11-204ENST00000530660 S1PR3Q99500 378 aa11.35□□□□□ -0.59
PCF11-204ENST00000530660 PRRC2CQ9Y520 2896 aaKnown RBP11.35□□□□□ -0.59
PCF11-204ENST00000530660 SRYQ05066 204 aa11.35□□□□□ -0.59
PCF11-204ENST00000530660 MBNL2Q5VZF2 373 aaKnown RBP11.35□□□□□ -0.59
PCF11-204ENST00000530660 IMMP1LQ96LU5 166 aa11.35□□□□□ -0.59
PCF11-204ENST00000530660 OCIAD1Q9NX40 245 aa11.35□□□□□ -0.59
PCF11-204ENST00000530660 DNAJC13O75165 2243 aa11.35□□□□□ -0.59
PCF11-204ENST00000530660 PRR14LQ5THK1 2151 aa11.35□□□□□ -0.59
PCF11-204ENST00000530660 A0A1W2PQM1 296 aa11.35□□□□□ -0.59
PCF11-204ENST00000530660 hADV38S2A0JD32 116 aa11.35□□□□□ -0.59
PCF11-204ENST00000530660 COX6A1P12074 109 aa11.35□□□□□ -0.59
PCF11-204ENST00000530660 UTF1Q5T230 341 aa11.35□□□□□ -0.59
PCF11-204ENST00000530660 GUSBP11Q6P575 273 aa11.35□□□□□ -0.59
PCF11-204ENST00000530660 GNG12Q9UBI6 72 aa11.35□□□□□ -0.59
PCF11-204ENST00000530660 NPIPB5A8MRT5 1133 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 COX7A2P2O60397 106 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 FCER1GP30273 86 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 EDDM3AQ14507 147 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 ALKBH6Q3KRA9 238 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 SFTA2Q6UW10 78 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 IGHV5-10-1A0A0J9YXX1 117 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 OVOL3O00110 214 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 PATE2Q6UY27 113 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 OR5AN1Q8NGI8 311 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 HIGD1BQ9P298 99 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms