RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 IGHV1-3A0A0C4DH29 117 aa15.52■□□□□ 0.07
PCF11-203ENST00000530304 C19orf71A6NCJ1 209 aa15.52■□□□□ 0.07
PCF11-203ENST00000530304 MAJINQ3KP22 176 aa15.52■□□□□ 0.07
PCF11-203ENST00000530304 EBLN2Q6P2I7 272 aa15.52■□□□□ 0.07
PCF11-203ENST00000530304 Q8NA96 180 aa15.52■□□□□ 0.07
PCF11-203ENST00000530304 TXN2Q99757 166 aa15.52■□□□□ 0.07
PCF11-203ENST00000530304 RALYQ9UKM9 306 aaKnown RBP15.52■□□□□ 0.07
PCF11-203ENST00000530304 ZNF835Q9Y2P0 537 aa15.52■□□□□ 0.07
PCF11-203ENST00000530304 A8MWL6 223 aa15.51■□□□□ 0.07
PCF11-203ENST00000530304 TEX22C9J3V5 150 aa15.51■□□□□ 0.07
PCF11-203ENST00000530304 P01737 135 aa15.51■□□□□ 0.07
PCF11-203ENST00000530304 Q6ZN92 141 aa15.51■□□□□ 0.07
PCF11-203ENST00000530304 BUB1B-PAK6H3BSN5 160 aa15.51■□□□□ 0.07
PCF11-203ENST00000530304 TFPI2P48307 235 aa15.51■□□□□ 0.07
PCF11-203ENST00000530304 PMCHL1Q16048 86 aa15.51■□□□□ 0.07
PCF11-203ENST00000530304 KLHDC1Q8N7A1 406 aa15.51■□□□□ 0.07
PCF11-203ENST00000530304 HIGD1AQ9Y241 93 aa15.51■□□□□ 0.07
PCF11-203ENST00000530304 ANKRD11Q6UB99 2663 aaPredicted RBP15.51■□□□□ 0.07
PCF11-203ENST00000530304 PSG1P11464 419 aa15.5■□□□□ 0.07
PCF11-203ENST00000530304 CT83Q5H943 113 aa15.5■□□□□ 0.07
PCF11-203ENST00000530304 COL5A1-AS1Q5SY13 56 aa15.5■□□□□ 0.07
PCF11-203ENST00000530304 NGBQ9NPG2 151 aa15.5■□□□□ 0.07
PCF11-203ENST00000530304 ZNF492Q9P255 531 aa15.5■□□□□ 0.07
PCF11-203ENST00000530304 MALRD1Q5VYJ5 2156 aa15.5■□□□□ 0.07
PCF11-203ENST00000530304 LYZP61626 148 aa15.5■□□□□ 0.07
PCF11-203ENST00000530304 PAX2Q02962 417 aa15.5■□□□□ 0.07
PCF11-203ENST00000530304 GAGE1Q13065 139 aa15.5■□□□□ 0.07
PCF11-203ENST00000530304 OR8B3Q8NGG8 313 aa15.5■□□□□ 0.07
PCF11-203ENST00000530304 URB1-AS1Q96HZ7 61 aa15.5■□□□□ 0.07
PCF11-203ENST00000530304 PGLYRP4Q96LB8 373 aa15.5■□□□□ 0.07
PCF11-203ENST00000530304 OR8B2Q96RD0 313 aa15.5■□□□□ 0.07
PCF11-203ENST00000530304 CD24P25063 80 aa15.49■□□□□ 0.07
PCF11-203ENST00000530304 DAZAP1Q96EP5 407 aaKnown RBP15.49■□□□□ 0.07
PCF11-203ENST00000530304 GOLT1BQ9Y3E0 138 aa15.49■□□□□ 0.07
PCF11-203ENST00000530304 ZZEF1O43149 2961 aa15.49■□□□□ 0.07
PCF11-203ENST00000530304 C2orf70A6NJV1 201 aa15.49■□□□□ 0.07
PCF11-203ENST00000530304 LYNX1G3V0Z9 82 aa15.49■□□□□ 0.07
PCF11-203ENST00000530304 NPSP0C0P6 89 aa15.49■□□□□ 0.07
PCF11-203ENST00000530304 IGLC1P0CG04 106 aa15.49■□□□□ 0.07
PCF11-203ENST00000530304 LYNX1P0DP58 116 aa15.49■□□□□ 0.07
PCF11-203ENST00000530304 HNRNPA3P51991 378 aaKnown RBP15.49■□□□□ 0.07
PCF11-203ENST00000530304 Q56UQ5 140 aa15.49■□□□□ 0.07
PCF11-203ENST00000530304 FBXL15Q9H469 300 aa15.49■□□□□ 0.07
PCF11-203ENST00000530304 APOBEC3AP31941 199 aaPredicted RBP15.48■□□□□ 0.07
PCF11-203ENST00000530304 TRAV8-1A0A0A6YYK1 113 aa15.48■□□□□ 0.07
PCF11-203ENST00000530304 FOXA3P55318 350 aaPredicted RBP15.48■□□□□ 0.07
PCF11-203ENST00000530304 SLC25A39Q9BZJ4 359 aaPredicted RBP15.48■□□□□ 0.07
PCF11-203ENST00000530304 SRSF12Q8WXF0 261 aaKnown RBP15.47■□□□□ 0.07
PCF11-203ENST00000530304 RBM14Q96PK6 669 aaKnown RBP15.47■□□□□ 0.07
PCF11-203ENST00000530304 GFRA4Q9GZZ7 299 aa15.47■□□□□ 0.07
PCF11-203ENST00000530304 LAMTOR2Q9Y2Q5 125 aa15.47■□□□□ 0.07
PCF11-203ENST00000530304 ACACAQ13085 2346 aa15.47■□□□□ 0.07
PCF11-203ENST00000530304 COX7A1P24310 79 aa15.47■□□□□ 0.07
PCF11-203ENST00000530304 RBPMS2Q6ZRY4 209 aaKnown RBP15.47■□□□□ 0.07
PCF11-203ENST00000530304 EXOC3-AS1Q8N2X6 119 aa15.47■□□□□ 0.07
PCF11-203ENST00000530304 KIR3DL3Q8N743 410 aa15.47■□□□□ 0.07
PCF11-203ENST00000530304 OTORQ9NRC9 128 aa15.47■□□□□ 0.07
PCF11-203ENST00000530304 SOX21Q9Y651 276 aaPredicted RBP15.47■□□□□ 0.07
PCF11-203ENST00000530304 I3L2K1 104 aa15.47■□□□□ 0.07
PCF11-203ENST00000530304 CIARTQ8N365 385 aaPredicted RBP15.47■□□□□ 0.07
PCF11-203ENST00000530304 ABCA1O95477 2261 aa15.46■□□□□ 0.07
PCF11-203ENST00000530304 B9A039 149 aa15.46■□□□□ 0.07
PCF11-203ENST00000530304 M0QZ24 198 aa15.46■□□□□ 0.07
PCF11-203ENST00000530304 PRR30Q53SZ7 412 aaPredicted RBP15.46■□□□□ 0.07
PCF11-203ENST00000530304 Q86TA4 180 aa15.46■□□□□ 0.07
PCF11-203ENST00000530304 RPEQ96AT9 228 aa15.46■□□□□ 0.07
PCF11-203ENST00000530304 RASL11BQ9BPW5 248 aa15.46■□□□□ 0.07
PCF11-203ENST00000530304 TMEM14CQ9P0S9 112 aa15.46■□□□□ 0.07
PCF11-203ENST00000530304 PIEZO2Q9H5I5 2752 aa15.46■□□□□ 0.07
PCF11-203ENST00000530304 TRAV9-2A0A087WT02 112 aa15.46■□□□□ 0.06
PCF11-203ENST00000530304 RBP4P02753 201 aa15.46■□□□□ 0.06
PCF11-203ENST00000530304 STPG4Q8N801 248 aa15.46■□□□□ 0.06
PCF11-203ENST00000530304 CLEC5AQ9NY25 188 aa15.46■□□□□ 0.06
PCF11-203ENST00000530304 SH2D7A6NKC9 451 aaPredicted RBP15.45■□□□□ 0.06
PCF11-203ENST00000530304 NPIPB6E9PJ23 425 aa15.45■□□□□ 0.06
PCF11-203ENST00000530304 TOX4O94842 621 aa15.45■□□□□ 0.06
PCF11-203ENST00000530304 IGLV2-11P01706 119 aa15.45■□□□□ 0.06
PCF11-203ENST00000530304 RBPJQ06330 500 aa15.45■□□□□ 0.06
PCF11-203ENST00000530304 SPATA12Q7Z6I5 190 aa15.45■□□□□ 0.06
PCF11-203ENST00000530304 PPIAL4CA0A0B4J2A2 164 aa15.45■□□□□ 0.06
PCF11-203ENST00000530304 PPIAL4GP0DN37 164 aa15.45■□□□□ 0.06
PCF11-203ENST00000530304 COL8A1P27658 744 aa15.45■□□□□ 0.06
PCF11-203ENST00000530304 TSPOP30536 169 aa15.45■□□□□ 0.06
PCF11-203ENST00000530304 GOLT1AQ6ZVE7 132 aa15.45■□□□□ 0.06
PCF11-203ENST00000530304 PRNTQ86SH4 94 aa15.45■□□□□ 0.06
PCF11-203ENST00000530304 PLGLAQ15195 96 aa15.44■□□□□ 0.06
PCF11-203ENST00000530304 FAM162BQ5T6X4 162 aa15.44■□□□□ 0.06
PCF11-203ENST00000530304 Q71RC1 249 aaPredicted RBP15.44■□□□□ 0.06
PCF11-203ENST00000530304 POLEQ07864 2286 aa15.44■□□□□ 0.06
PCF11-203ENST00000530304 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.44■□□□□ 0.06
PCF11-203ENST00000530304 FAM231BA6NCW3 169 aa15.44■□□□□ 0.06
PCF11-203ENST00000530304 FAM120AOSQ5T036 256 aa15.44■□□□□ 0.06
PCF11-203ENST00000530304 TMEM70Q9BUB7 260 aa15.44■□□□□ 0.06
PCF11-203ENST00000530304 ZFP30Q9Y2G7 519 aa15.44■□□□□ 0.06
PCF11-203ENST00000530304 RIF1Q5UIP0 2472 aaKnown RBP15.44■□□□□ 0.06
PCF11-203ENST00000530304 IGKV1-17P01599 117 aa15.43■□□□□ 0.06
PCF11-203ENST00000530304 CD3EP07766 207 aa15.43■□□□□ 0.06
PCF11-203ENST00000530304 IGLL1P15814 213 aa15.43■□□□□ 0.06
PCF11-203ENST00000530304 TCF15Q12870 199 aa15.43■□□□□ 0.06
PCF11-203ENST00000530304 APC2O95996 2303 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms