RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 SPRY4Q9C004 299 aa10.04□□□□□ -0.8
SCN3B-206ENST00000530277 F11RQ9Y624 299 aaKnown RBP10.04□□□□□ -0.8
SCN3B-206ENST00000530277 IGHV2-26A0A0B4J1V2 119 aa10.04□□□□□ -0.8
SCN3B-206ENST00000530277 A0A1W2PPI3 338 aa10.04□□□□□ -0.8
SCN3B-206ENST00000530277 MGPP08493 103 aa10.04□□□□□ -0.8
SCN3B-206ENST00000530277 RPL15P61313 204 aaKnown RBP10.04□□□□□ -0.8
SCN3B-206ENST00000530277 RAB37Q96AX2 223 aa10.04□□□□□ -0.8
SCN3B-206ENST00000530277 TCRBV4S1A1TA0A5B7 111 aa10.03□□□□□ -0.8
SCN3B-206ENST00000530277 IFITM10A6NMD0 228 aa10.03□□□□□ -0.8
SCN3B-206ENST00000530277 BTF3P20290 206 aaKnown RBP10.03□□□□□ -0.8
SCN3B-206ENST00000530277 VDAC2P45880 294 aaPredicted RBP10.03□□□□□ -0.8
SCN3B-206ENST00000530277 MEF2CQ06413 473 aaPredicted RBP10.03□□□□□ -0.8
SCN3B-206ENST00000530277 ZNF841Q6ZN19 808 aa10.03□□□□□ -0.8
SCN3B-206ENST00000530277 NUDT10Q8NFP7 164 aa10.03□□□□□ -0.8
SCN3B-206ENST00000530277 NUDT11Q96G61 164 aa10.03□□□□□ -0.8
SCN3B-206ENST00000530277 MFAP4P55083 255 aa10.03□□□□□ -0.8
SCN3B-206ENST00000530277 LOXL3P58215 753 aa10.03□□□□□ -0.8
SCN3B-206ENST00000530277 WT1-ASQ06250 92 aa10.03□□□□□ -0.8
SCN3B-206ENST00000530277 SLC25A48Q6ZT89 311 aaKnown RBP10.03□□□□□ -0.8
SCN3B-206ENST00000530277 PARD6GQ9BYG4 376 aaPredicted RBP10.03□□□□□ -0.8
SCN3B-206ENST00000530277 CHODLQ9H9P2 273 aa10.03□□□□□ -0.8
SCN3B-206ENST00000530277 C10orf142B7Z368 130 aa10.03□□□□□ -0.8
SCN3B-206ENST00000530277 PROP1O75360 226 aa10.03□□□□□ -0.8
SCN3B-206ENST00000530277 SEM1Q6ZVN7 128 aa10.03□□□□□ -0.8
SCN3B-206ENST00000530277 Q8TAT8 98 aa10.03□□□□□ -0.8
SCN3B-206ENST00000530277 Q8TCH9 128 aa10.03□□□□□ -0.8
SCN3B-206ENST00000530277 C1RLQ9NZP8 487 aa10.03□□□□□ -0.8
SCN3B-206ENST00000530277 EPDR1Q9UM22 224 aa10.03□□□□□ -0.8
SCN3B-206ENST00000530277 A8MWP6 167 aa10.02□□□□□ -0.8
SCN3B-206ENST00000530277 GGTLC3B5MD39 225 aa10.02□□□□□ -0.8
SCN3B-206ENST00000530277 SPANXN1Q5VSR9 72 aa10.02□□□□□ -0.8
SCN3B-206ENST00000530277 GLMPQ8WWB7 406 aa10.02□□□□□ -0.8
SCN3B-206ENST00000530277 CACNG8Q8WXS5 425 aa10.02□□□□□ -0.8
SCN3B-206ENST00000530277 GPR82Q96P67 336 aa10.02□□□□□ -0.8
SCN3B-206ENST00000530277 FBXL7Q9UJT9 491 aa10.02□□□□□ -0.8
SCN3B-206ENST00000530277 DLEU1O43261 78 aa10.02□□□□□ -0.81
SCN3B-206ENST00000530277 NDUFS7O75251 213 aa10.02□□□□□ -0.81
SCN3B-206ENST00000530277 TMPRSS3P57727 454 aa10.02□□□□□ -0.81
SCN3B-206ENST00000530277 HBBP68871 147 aa10.02□□□□□ -0.81
SCN3B-206ENST00000530277 KRTAP27-1Q3LI81 207 aa10.02□□□□□ -0.81
SCN3B-206ENST00000530277 CLEC19AQ6UXS0 136 aa10.02□□□□□ -0.81
SCN3B-206ENST00000530277 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.02□□□□□ -0.81
SCN3B-206ENST00000530277 TEX45Q8NA69 505 aa10.02□□□□□ -0.81
SCN3B-206ENST00000530277 TMEM116Q8NCL8 245 aa10.02□□□□□ -0.81
SCN3B-206ENST00000530277 MRPL32Q9BYC8 188 aaKnown RBP10.02□□□□□ -0.81
SCN3B-206ENST00000530277 TMEM242Q9NWH2 141 aa10.02□□□□□ -0.81
SCN3B-206ENST00000530277 MORN5Q5VZ52 161 aa10.02□□□□□ -0.81
SCN3B-206ENST00000530277 Q6ZSR3 168 aa10.02□□□□□ -0.81
SCN3B-206ENST00000530277 ZNF295-AS1Q8N0V1 137 aa10.02□□□□□ -0.81
SCN3B-206ENST00000530277 LSM4Q9Y4Z0 139 aaKnown RBP10.02□□□□□ -0.81
SCN3B-206ENST00000530277 LRP4O75096 1905 aa10.02□□□□□ -0.81
SCN3B-206ENST00000530277 OR4C46A6NHA9 309 aa10.01□□□□□ -0.81
SCN3B-206ENST00000530277 NPIPB5A8MRT5 1133 aa10.01□□□□□ -0.81
SCN3B-206ENST00000530277 SRD5A1P18405 259 aa10.01□□□□□ -0.81
SCN3B-206ENST00000530277 CD99P14209 185 aa10.01□□□□□ -0.81
SCN3B-206ENST00000530277 C21orf62Q9NYP8 219 aa10.01□□□□□ -0.81
SCN3B-206ENST00000530277 CDC42EP3Q9UKI2 254 aa10.01□□□□□ -0.81
SCN3B-206ENST00000530277 EPG5Q9HCE0 2579 aa10.01□□□□□ -0.81
SCN3B-206ENST00000530277 TRBV20OR9-2A0A075B6H5 130 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 IGHV1-3A0A0C4DH29 117 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 NUPR1O60356 82 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 IGLV1-44P01699 117 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 CA7P43166 264 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 BRWD1-AS2P59051 145 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 DAZAP2Q15038 168 aaPredicted RBP10□□□□□ -0.81
SCN3B-206ENST00000530277 CCDC144NLQ6NUI1 221 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 TMEM136Q6ZRR5 245 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 C16orf92Q96LL3 132 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 C2orf88Q9BSF0 95 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 DSCAML1Q8TD84 2053 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 FAM106CPP0CH98 169 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 SFTPCP11686 197 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 MAJINQ3KP22 176 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 CFAP47Q6ZTR5 3102 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 IGKV2-40A0A087WW87 121 aaPredicted RBP10□□□□□ -0.81
SCN3B-206ENST00000530277 A0A1W2PRE2 83 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 IGKV2D-40P01614 121 aaPredicted RBP10□□□□□ -0.81
SCN3B-206ENST00000530277 HLA-DRB1P01911 266 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 APOHP02749 345 aaPredicted RBP10□□□□□ -0.81
SCN3B-206ENST00000530277 COX19Q49B96 90 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 LBHQ53QV2 105 aaPredicted RBP10□□□□□ -0.81
SCN3B-206ENST00000530277 C2orf83Q53S99 150 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 FAM168AQ92567 244 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 RITA1Q96K30 269 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 RPP21Q9H633 154 aaKnown RBP10□□□□□ -0.81
SCN3B-206ENST00000530277 TMEM14BQ9NUH8 114 aa10□□□□□ -0.81
SCN3B-206ENST00000530277 TNRC6AQ8NDV7 1962 aaKnown RBP10□□□□□ -0.81
SCN3B-206ENST00000530277 COMPP49747 757 aaPredicted RBP9.99□□□□□ -0.81
SCN3B-206ENST00000530277 ACTL10Q5JWF8 245 aa9.99□□□□□ -0.81
SCN3B-206ENST00000530277 BRD3OSQ6XYD6 125 aa9.99□□□□□ -0.81
SCN3B-206ENST00000530277 OR4B1Q8NGF8 309 aa9.99□□□□□ -0.81
SCN3B-206ENST00000530277 RNASEH2CQ8TDP1 164 aaKnown RBP9.99□□□□□ -0.81
SCN3B-206ENST00000530277 RNF125Q96EQ8 232 aa9.99□□□□□ -0.81
SCN3B-206ENST00000530277 FNDC4Q9H6D8 234 aaPredicted RBP9.99□□□□□ -0.81
SCN3B-206ENST00000530277 E7EUB6 86 aa9.99□□□□□ -0.81
SCN3B-206ENST00000530277 RPL24P83731 157 aaKnown RBP9.99□□□□□ -0.81
SCN3B-206ENST00000530277 FAM162BQ5T6X4 162 aa9.99□□□□□ -0.81
SCN3B-206ENST00000530277 C19orf24Q9BVV8 132 aa9.99□□□□□ -0.81
SCN3B-206ENST00000530277 AP5S1Q9NUS5 200 aa9.99□□□□□ -0.81
SCN3B-206ENST00000530277 PKD1L2Q7Z442 2459 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms