RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 EEF1AKMT3Q96AZ1 226 aa11.17□□□□□ -0.62
TTC39A-216ENST00000530004 SLC25A2Q9BXI2 301 aa11.17□□□□□ -0.62
TTC39A-216ENST00000530004 NF1P21359 2839 aa11.17□□□□□ -0.62
TTC39A-216ENST00000530004 CTSGP08311 255 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 CEBPGP53567 150 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 UBE2G2P60604 165 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 MEF2BQ02080 365 aaPredicted RBP11.16□□□□□ -0.62
TTC39A-216ENST00000530004 CFHR3Q02985 330 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 PQLC2Q6ZP29 291 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 OR5AU1Q8NGC0 362 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 Q8WTZ3 238 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 ZNF503Q96F45 646 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 FAM167A-AS1Q96KT0 104 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 CCDC140Q96MF4 163 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 HIGD1AQ9Y241 93 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 CARHSP1Q9Y2V2 147 aaKnown RBP11.16□□□□□ -0.62
TTC39A-216ENST00000530004 RNF114Q9Y508 228 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 TRBV7-1A0A0A6YYK4 115 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 A0A1B0GUS0 222 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 TMEM89A2RUT3 159 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 NUPL2O15504 423 aaKnown RBP11.16□□□□□ -0.62
TTC39A-216ENST00000530004 BRI3O95415 125 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 IL4P05112 153 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 CLEC3BP05452 202 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 FOXL1Q12952 345 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 CLEC19AQ6UXS0 136 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 ZNF491Q8N8L2 437 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 CYB561D1Q8N8Q1 229 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 CHRDL1Q9BU40 450 aa11.16□□□□□ -0.62
TTC39A-216ENST00000530004 IGLV1-40P01703 118 aa11.15□□□□□ -0.62
TTC39A-216ENST00000530004 PF4V1P10720 104 aa11.15□□□□□ -0.62
TTC39A-216ENST00000530004 ADMP35318 185 aa11.15□□□□□ -0.62
TTC39A-216ENST00000530004 PROK1P58294 105 aa11.15□□□□□ -0.62
TTC39A-216ENST00000530004 CD81P60033 236 aa11.15□□□□□ -0.62
TTC39A-216ENST00000530004 C10orf99Q6UWK7 81 aa11.15□□□□□ -0.62
TTC39A-216ENST00000530004 ZNF329Q86UD4 541 aa11.15□□□□□ -0.62
TTC39A-216ENST00000530004 CCDC28AQ8IWP9 274 aa11.15□□□□□ -0.62
TTC39A-216ENST00000530004 RNF125Q96EQ8 232 aa11.15□□□□□ -0.62
TTC39A-216ENST00000530004 GAR1Q9NY12 217 aaKnown RBP11.15□□□□□ -0.62
TTC39A-216ENST00000530004 WI2-2373I1.2A0A1W2PRP0 233 aa11.14□□□□□ -0.63
TTC39A-216ENST00000530004 OR2C1O95371 312 aa11.14□□□□□ -0.63
TTC39A-216ENST00000530004 SLC35B1P78383 322 aa11.14□□□□□ -0.63
TTC39A-216ENST00000530004 KIAA0141Q14154 515 aaPredicted RBP11.14□□□□□ -0.63
TTC39A-216ENST00000530004 GUCA2BQ16661 112 aa11.14□□□□□ -0.63
TTC39A-216ENST00000530004 SOHLH1Q5JUK2 328 aa11.14□□□□□ -0.63
TTC39A-216ENST00000530004 CST9LP1Q5W188 147 aa11.14□□□□□ -0.63
TTC39A-216ENST00000530004 KLHDC1Q8N7A1 406 aa11.14□□□□□ -0.63
TTC39A-216ENST00000530004 WIPF2Q8TF74 440 aaPredicted RBP11.14□□□□□ -0.63
TTC39A-216ENST00000530004 TMEM158Q8WZ71 300 aa11.14□□□□□ -0.63
TTC39A-216ENST00000530004 KLK15Q9H2R5 256 aa11.14□□□□□ -0.63
TTC39A-216ENST00000530004 GNB4Q9HAV0 340 aa11.14□□□□□ -0.63
TTC39A-216ENST00000530004 TMEM167BQ9NRX6 74 aa11.14□□□□□ -0.63
TTC39A-216ENST00000530004 MRPL27Q9P0M9 148 aaKnown RBP11.14□□□□□ -0.63
TTC39A-216ENST00000530004 C11orf94C9JXX5 98 aa11.13□□□□□ -0.63
TTC39A-216ENST00000530004 HAX1O00165 279 aa11.13□□□□□ -0.63
TTC39A-216ENST00000530004 TGOLN2O43493 480 aa11.13□□□□□ -0.63
TTC39A-216ENST00000530004 OR10J4P0C629 311 aa11.13□□□□□ -0.63
TTC39A-216ENST00000530004 SVBPQ8N300 66 aa11.13□□□□□ -0.63
TTC39A-216ENST00000530004 USMG5Q96IX5 58 aa11.13□□□□□ -0.63
TTC39A-216ENST00000530004 OR4F4Q96R69 305 aa11.13□□□□□ -0.63
TTC39A-216ENST00000530004 PAXXQ9BUH6 204 aa11.13□□□□□ -0.63
TTC39A-216ENST00000530004 SLC25A39Q9BZJ4 359 aaPredicted RBP11.13□□□□□ -0.63
TTC39A-216ENST00000530004 OR51M1Q9H341 326 aa11.13□□□□□ -0.63
TTC39A-216ENST00000530004 PUS1Q9Y606 427 aaKnown RBP eCLIP11.13□□□□□ -0.63
TTC39A-216ENST00000530004 FAM74A7A6NL05 159 aa11.13□□□□□ -0.63
TTC39A-216ENST00000530004 IGHG4P01861 327 aa11.13□□□□□ -0.63
TTC39A-216ENST00000530004 PYYP10082 97 aa11.13□□□□□ -0.63
TTC39A-216ENST00000530004 ATP5G3P48201 142 aa11.13□□□□□ -0.63
TTC39A-216ENST00000530004 RIPPLY3P57055 190 aa11.13□□□□□ -0.63
TTC39A-216ENST00000530004 UBE2L3P68036 154 aaKnown RBP11.13□□□□□ -0.63
TTC39A-216ENST00000530004 USF2Q15853 346 aaPredicted RBP11.13□□□□□ -0.63
TTC39A-216ENST00000530004 LEMD1Q68G75 181 aa11.13□□□□□ -0.63
TTC39A-216ENST00000530004 LCNL1Q6ZST4 164 aa11.13□□□□□ -0.63
TTC39A-216ENST00000530004 YTHDF2Q9Y5A9 579 aaKnown RBP11.13□□□□□ -0.63
TTC39A-216ENST00000530004 IGHV3-35A0A0C4DH35 117 aa11.12□□□□□ -0.63
TTC39A-216ENST00000530004 SCO1O75880 301 aa11.12□□□□□ -0.63
TTC39A-216ENST00000530004 RAB9AP51151 201 aa11.12□□□□□ -0.63
TTC39A-216ENST00000530004 AWAT1Q58HT5 328 aa11.12□□□□□ -0.63
TTC39A-216ENST00000530004 TEX38Q6PEX7 206 aa11.12□□□□□ -0.63
TTC39A-216ENST00000530004 ZNF600Q6ZNG1 722 aa11.12□□□□□ -0.63
TTC39A-216ENST00000530004 STXBP6Q8NFX7 210 aa11.12□□□□□ -0.63
TTC39A-216ENST00000530004 SUN5Q8TC36 379 aa11.12□□□□□ -0.63
TTC39A-216ENST00000530004 ATP6V0BQ99437 205 aa11.12□□□□□ -0.63
TTC39A-216ENST00000530004 ATRQ13535 2644 aa11.12□□□□□ -0.63
TTC39A-216ENST00000530004 H3BRN7 92 aa11.11□□□□□ -0.63
TTC39A-216ENST00000530004 PSMB8P28062 276 aa11.11□□□□□ -0.63
TTC39A-216ENST00000530004 FAM90A2PQ658T7 463 aa11.11□□□□□ -0.63
TTC39A-216ENST00000530004 ATRAIDQ6UW56 229 aa11.11□□□□□ -0.63
TTC39A-216ENST00000530004 ZNF414Q96IQ9 312 aa11.11□□□□□ -0.63
TTC39A-216ENST00000530004 SHANK2-AS3Q9BTD1 123 aa11.11□□□□□ -0.63
TTC39A-216ENST00000530004 A0A0G2JLM5 398 aa11.11□□□□□ -0.63
TTC39A-216ENST00000530004 PPP5D1E7EU14 171 aa11.11□□□□□ -0.63
TTC39A-216ENST00000530004 PDE6DO43924 150 aa11.11□□□□□ -0.63
TTC39A-216ENST00000530004 NDUFS6O75380 124 aaKnown RBP11.11□□□□□ -0.63
TTC39A-216ENST00000530004 IGHV3-11P01762 117 aa11.11□□□□□ -0.63
TTC39A-216ENST00000530004 ELANEP08246 267 aa11.11□□□□□ -0.63
TTC39A-216ENST00000530004 FXYD5Q96DB9 178 aa11.11□□□□□ -0.63
TTC39A-216ENST00000530004 TXNDC17Q9BRA2 123 aa11.11□□□□□ -0.63
TTC39A-216ENST00000530004 ARL2-SNX15V9GYD0 113 aa11.11□□□□□ -0.63
TTC39A-216ENST00000530004 TMEM250H0YL14 139 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms