RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 TMEM128Q5BJH2 165 aa11.39□□□□□ -0.59
COL16A1-216ENST00000529928 SPANXN2Q5MJ10 180 aa11.39□□□□□ -0.59
COL16A1-216ENST00000529928 GDF5OSQ5U4N7 250 aa11.39□□□□□ -0.59
COL16A1-216ENST00000529928 TMEM88Q6PEY1 159 aa11.39□□□□□ -0.59
COL16A1-216ENST00000529928 C15orf53Q8NAA6 179 aa11.39□□□□□ -0.59
COL16A1-216ENST00000529928 RNASEH2CQ8TDP1 164 aaKnown RBP11.39□□□□□ -0.59
COL16A1-216ENST00000529928 CLUHP3Q96NS8 147 aa11.39□□□□□ -0.59
COL16A1-216ENST00000529928 SAV1Q9H4B6 383 aaPredicted RBP11.39□□□□□ -0.59
COL16A1-216ENST00000529928 SHPKQ9UHJ6 478 aa11.39□□□□□ -0.59
COL16A1-216ENST00000529928 HBE1P02100 147 aa11.38□□□□□ -0.59
COL16A1-216ENST00000529928 SULT1A3P0DMM9 295 aa11.38□□□□□ -0.59
COL16A1-216ENST00000529928 SULT1A4P0DMN0 295 aa11.38□□□□□ -0.59
COL16A1-216ENST00000529928 NUP62P37198 522 aaPredicted RBP11.38□□□□□ -0.59
COL16A1-216ENST00000529928 C2orf83Q53S99 150 aa11.38□□□□□ -0.59
COL16A1-216ENST00000529928 ETFRF1Q6IPR1 90 aa11.38□□□□□ -0.59
COL16A1-216ENST00000529928 FOXI2Q6ZQN5 318 aa11.38□□□□□ -0.59
COL16A1-216ENST00000529928 ZNF709Q8N972 641 aa11.38□□□□□ -0.59
COL16A1-216ENST00000529928 SLC25A21Q9BQT8 299 aaPredicted RBP11.38□□□□□ -0.59
COL16A1-216ENST00000529928 HEYLQ9NQ87 328 aaPredicted RBP11.38□□□□□ -0.59
COL16A1-216ENST00000529928 HSPB7Q9UBY9 170 aa11.38□□□□□ -0.59
COL16A1-216ENST00000529928 GOLT1BQ9Y3E0 138 aa11.38□□□□□ -0.59
COL16A1-216ENST00000529928 YTHDF2Q9Y5A9 579 aaKnown RBP11.38□□□□□ -0.59
COL16A1-216ENST00000529928 LOC102723971A0A1B0GUV8 181 aa11.37□□□□□ -0.59
COL16A1-216ENST00000529928 TOMM40O96008 361 aa11.37□□□□□ -0.59
COL16A1-216ENST00000529928 RD3LP0DJH9 198 aa11.37□□□□□ -0.59
COL16A1-216ENST00000529928 ID1P41134 155 aa11.37□□□□□ -0.59
COL16A1-216ENST00000529928 CCR6P51684 374 aa11.37□□□□□ -0.59
COL16A1-216ENST00000529928 DAD1P61803 113 aa11.37□□□□□ -0.59
COL16A1-216ENST00000529928 TMED4Q7Z7H5 227 aa11.37□□□□□ -0.59
COL16A1-216ENST00000529928 LGI3Q8N145 548 aa11.37□□□□□ -0.59
COL16A1-216ENST00000529928 LRTM2Q8N967 370 aa11.37□□□□□ -0.59
COL16A1-216ENST00000529928 ATG101Q9BSB4 218 aa11.37□□□□□ -0.59
COL16A1-216ENST00000529928 PFDN2Q9UHV9 154 aa11.37□□□□□ -0.59
COL16A1-216ENST00000529928 PITX3O75364 302 aa11.36□□□□□ -0.59
COL16A1-216ENST00000529928 NXPH3O95157 252 aa11.36□□□□□ -0.59
COL16A1-216ENST00000529928 ANXA3P12429 323 aa11.36□□□□□ -0.59
COL16A1-216ENST00000529928 SRPXP78539 464 aa11.36□□□□□ -0.59
COL16A1-216ENST00000529928 SMCO1Q147U7 214 aa11.36□□□□□ -0.59
COL16A1-216ENST00000529928 SPATA31B1PQ5VZV4 182 aa11.36□□□□□ -0.59
COL16A1-216ENST00000529928 Q8N1X5 172 aa11.36□□□□□ -0.59
COL16A1-216ENST00000529928 SLC24A4Q8NFF2 622 aa11.36□□□□□ -0.59
COL16A1-216ENST00000529928 OR4B1Q8NGF8 309 aa11.36□□□□□ -0.59
COL16A1-216ENST00000529928 LINC00052Q96N35 136 aa11.36□□□□□ -0.59
COL16A1-216ENST00000529928 C7orf50Q9BRJ6 194 aaKnown RBP11.36□□□□□ -0.59
COL16A1-216ENST00000529928 CEBPZOSA8MTT3 80 aa11.35□□□□□ -0.59
COL16A1-216ENST00000529928 PSG1P11464 419 aa11.35□□□□□ -0.59
COL16A1-216ENST00000529928 BTCP35070 178 aa11.35□□□□□ -0.59
COL16A1-216ENST00000529928 PSMB3P49720 205 aa11.35□□□□□ -0.59
COL16A1-216ENST00000529928 DEFB1P60022 68 aa11.35□□□□□ -0.59
COL16A1-216ENST00000529928 PPP1R1AQ13522 171 aa11.35□□□□□ -0.59
COL16A1-216ENST00000529928 RRN3P1Q2M238 152 aa11.35□□□□□ -0.59
COL16A1-216ENST00000529928 GSG1LQ6UXU4 331 aa11.35□□□□□ -0.59
COL16A1-216ENST00000529928 C6orf223Q8N319 242 aa11.35□□□□□ -0.59
COL16A1-216ENST00000529928 COQ8AQ8NI60 647 aa11.35□□□□□ -0.59
COL16A1-216ENST00000529928 NPIPB3Q92617 1050 aa11.35□□□□□ -0.59
COL16A1-216ENST00000529928 ACY3Q96HD9 319 aa11.35□□□□□ -0.59
COL16A1-216ENST00000529928 SLC35B3Q9H1N7 401 aa11.35□□□□□ -0.59
COL16A1-216ENST00000529928 NDUFA13Q9P0J0 144 aa11.35□□□□□ -0.59
COL16A1-216ENST00000529928 CACFD1Q9UGQ2 172 aa11.35□□□□□ -0.59
COL16A1-216ENST00000529928 HSPG2P98160 4391 aa11.35□□□□□ -0.59
COL16A1-216ENST00000529928 NBDYA0A0U1RRE5 68 aa11.34□□□□□ -0.59
COL16A1-216ENST00000529928 DUXBA0A1W2PPF3 345 aa11.34□□□□□ -0.59
COL16A1-216ENST00000529928 SFT2D2O95562 160 aa11.34□□□□□ -0.59
COL16A1-216ENST00000529928 PSG9Q00887 426 aa11.34□□□□□ -0.59
COL16A1-216ENST00000529928 NOXA1Q86UR1 476 aa11.34□□□□□ -0.59
COL16A1-216ENST00000529928 C1orf158Q8N1D5 194 aa11.34□□□□□ -0.59
COL16A1-216ENST00000529928 OR51G1Q8NGK1 321 aa11.34□□□□□ -0.59
COL16A1-216ENST00000529928 RNF125Q96EQ8 232 aa11.34□□□□□ -0.59
COL16A1-216ENST00000529928 WDR12Q9GZL7 423 aaKnown RBP11.34□□□□□ -0.59
COL16A1-216ENST00000529928 RBKSQ9H477 322 aa11.34□□□□□ -0.59
COL16A1-216ENST00000529928 NDUFB6O95139 128 aa11.33□□□□□ -0.6
COL16A1-216ENST00000529928 VAMP1P23763 118 aa11.33□□□□□ -0.6
COL16A1-216ENST00000529928 PAX9P55771 341 aa11.33□□□□□ -0.6
COL16A1-216ENST00000529928 OR8G2PQ6IF36 304 aa11.33□□□□□ -0.6
COL16A1-216ENST00000529928 EBLN2Q6P2I7 272 aa11.33□□□□□ -0.6
COL16A1-216ENST00000529928 DTD1Q8TEA8 209 aa11.33□□□□□ -0.6
COL16A1-216ENST00000529928 PBDC1Q9BVG4 233 aa11.33□□□□□ -0.6
COL16A1-216ENST00000529928 MAGT1Q9H0U3 335 aa11.33□□□□□ -0.6
COL16A1-216ENST00000529928 NAP1L6A6NFF2 107 aa11.32□□□□□ -0.6
COL16A1-216ENST00000529928 SLC25A6P12236 298 aa11.32□□□□□ -0.6
COL16A1-216ENST00000529928 IL7P13232 177 aa11.32□□□□□ -0.6
COL16A1-216ENST00000529928 UBE2MP61081 183 aaKnown RBP11.32□□□□□ -0.6
COL16A1-216ENST00000529928 FAM78BQ5VT40 261 aa11.32□□□□□ -0.6
COL16A1-216ENST00000529928 TRIQKQ629K1 86 aa11.32□□□□□ -0.6
COL16A1-216ENST00000529928 U3KQ87 197 aa11.32□□□□□ -0.6
COL16A1-216ENST00000529928 PIGBOS1A0A0B4J2F0 54 aa11.31□□□□□ -0.6
COL16A1-216ENST00000529928 ISLRO14498 428 aa11.31□□□□□ -0.6
COL16A1-216ENST00000529928 SOCS3O14543 225 aa11.31□□□□□ -0.6
COL16A1-216ENST00000529928 C1orf194Q5T5A4 169 aa11.31□□□□□ -0.6
COL16A1-216ENST00000529928 OR1S1Q8NH92 325 aa11.31□□□□□ -0.6
COL16A1-216ENST00000529928 ZNRF2Q8NHG8 242 aa11.31□□□□□ -0.6
COL16A1-216ENST00000529928 TMEM208Q9BTX3 173 aa11.31□□□□□ -0.6
COL16A1-216ENST00000529928 SCRT2Q9NQ03 307 aa11.31□□□□□ -0.6
COL16A1-216ENST00000529928 FLVCR2Q9UPI3 526 aa11.31□□□□□ -0.6
COL16A1-216ENST00000529928 A0A0J9YX75 114 aa11.3□□□□□ -0.6
COL16A1-216ENST00000529928 C9orf170A2RU37 121 aa11.3□□□□□ -0.6
COL16A1-216ENST00000529928 PLA2G10O15496 165 aa11.3□□□□□ -0.6
COL16A1-216ENST00000529928 SAMD13Q5VXD3 122 aa11.3□□□□□ -0.6
COL16A1-216ENST00000529928 IGF2BP2-AS1Q96M15 143 aa11.3□□□□□ -0.6
COL16A1-216ENST00000529928 RPRMQ9NS64 109 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms