RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 TAAR5O14804 337 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 ST8SIA3O43173 380 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 TGOLN2O43493 480 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 IFNA10P01566 189 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 C8orf88P0DMB2 117 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 SPP1P10451 314 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 TPT1P13693 172 aaKnown RBP6.34□□□□□ -1.39
SSBP3-212ENST00000528930 ANXA7P20073 488 aaKnown RBP6.34□□□□□ -1.39
SSBP3-212ENST00000528930 CBLN1P23435 193 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 BLOC1S1P78537 153 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 TMEM187Q14656 261 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 SMCO1Q147U7 214 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 FAM106AQ4KMX7 169 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 AARDQ4LEZ3 155 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 TM4SF20Q53R12 229 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 SPINK9Q5DT21 86 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 PVRIGQ6DKI7 326 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 LCN12Q6JVE5 192 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 STX12Q86Y82 276 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 SELENOHQ8IZQ5 122 aaKnown RBP6.34□□□□□ -1.39
SSBP3-212ENST00000528930 MAPKAPK5-AS1Q8N8E1 139 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 CACNG8Q8WXS5 425 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 GALNT14Q96FL9 552 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 BSCL2Q96G97 398 aaPredicted RBP6.34□□□□□ -1.39
SSBP3-212ENST00000528930 ATP6V0BQ99437 205 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 SPATA25Q9BR10 227 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 CHRDL1Q9BU40 450 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 UQCC1Q9NVA1 299 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 C21orf62Q9NYP8 219 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 TMEM56-RWDD3S4R434 201 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 ZNF320A2RRD8 509 aa6.33□□□□□ -1.4
SSBP3-212ENST00000528930 OR2T8A6NH00 312 aa6.33□□□□□ -1.4
SSBP3-212ENST00000528930 CD5P06127 495 aa6.33□□□□□ -1.4
SSBP3-212ENST00000528930 CTSGP08311 255 aa6.33□□□□□ -1.4
SSBP3-212ENST00000528930 IGHV4-30-4P0DP06 118 aa6.33□□□□□ -1.4
SSBP3-212ENST00000528930 BTF3P20290 206 aaKnown RBP6.33□□□□□ -1.4
SSBP3-212ENST00000528930 FCGR2BP31994 310 aaPredicted RBP6.33□□□□□ -1.4
SSBP3-212ENST00000528930 CAV2P51636 162 aa6.33□□□□□ -1.4
SSBP3-212ENST00000528930 ELLP55199 621 aaPredicted RBP6.33□□□□□ -1.4
SSBP3-212ENST00000528930 SUPT4H1P63272 117 aaKnown RBP6.33□□□□□ -1.4
SSBP3-212ENST00000528930 ERHP84090 104 aaKnown RBP6.33□□□□□ -1.4
SSBP3-212ENST00000528930 SPSB3Q6PJ21 355 aa6.33□□□□□ -1.4
SSBP3-212ENST00000528930 LINC00336Q6ZUF6 198 aa6.33□□□□□ -1.4
SSBP3-212ENST00000528930 FAM219AQ8IW50 185 aa6.33□□□□□ -1.4
SSBP3-212ENST00000528930 BAP18Q8IXM2 172 aa6.33□□□□□ -1.4
SSBP3-212ENST00000528930 INO80EQ8NBZ0 244 aaPredicted RBP6.33□□□□□ -1.4
SSBP3-212ENST00000528930 LYPD6BQ8NI32 183 aa6.33□□□□□ -1.4
SSBP3-212ENST00000528930 TMEM190Q8WZ59 177 aa6.33□□□□□ -1.4
SSBP3-212ENST00000528930 GPR146Q96CH1 333 aa6.33□□□□□ -1.4
SSBP3-212ENST00000528930 RRNAD1Q96FB5 475 aaKnown RBP6.33□□□□□ -1.4
SSBP3-212ENST00000528930 SMIM8Q96KF7 97 aa6.33□□□□□ -1.4
SSBP3-212ENST00000528930 PLEKHA3Q9HB20 300 aa6.33□□□□□ -1.4
SSBP3-212ENST00000528930 TECRQ9NZ01 308 aaKnown RBP6.33□□□□□ -1.4
SSBP3-212ENST00000528930 PRR13Q9NZ81 148 aa6.33□□□□□ -1.4
SSBP3-212ENST00000528930 SELENOKQ9Y6D0 94 aa6.33□□□□□ -1.4
SSBP3-212ENST00000528930 PKD1P98161 4303 aa6.33□□□□□ -1.4
SSBP3-212ENST00000528930 NDUFA4O00483 81 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 GOSR2O14653 212 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 MT-CO2P00403 227 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 IFNA17P01571 189 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 CD7P09564 240 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 OR4E1P0C645 316 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 RNASE2P10153 161 aaKnown RBP6.32□□□□□ -1.4
SSBP3-212ENST00000528930 RAB5CP51148 216 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 BSXQ3C1V8 233 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 TMEM268Q5VZI3 342 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 SGPP2Q8IWX5 399 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 Q8N1X5 172 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 UBAC2Q8NBM4 344 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 OR1S2Q8NGQ3 325 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 OR52E5Q8NH55 327 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 RXFP4Q8TDU9 374 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 DYNLRB2Q8TF09 96 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 MITD1Q8WV92 249 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 IL22RA2Q969J5 263 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 SCGB3A2Q96PL1 93 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 NMES1Q9C002 83 aa6.32□□□□□ -1.4
SSBP3-212ENST00000528930 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.32□□□□□ -1.4
SSBP3-212ENST00000528930 MRPL27Q9P0M9 148 aaKnown RBP6.32□□□□□ -1.4
SSBP3-212ENST00000528930 SIX6O95475 246 aa6.31□□□□□ -1.4
SSBP3-212ENST00000528930 IGHV3-48P01763 117 aa6.31□□□□□ -1.4
SSBP3-212ENST00000528930 AKR1C4P17516 323 aa6.31□□□□□ -1.4
SSBP3-212ENST00000528930 ADCYAP1P18509 176 aa6.31□□□□□ -1.4
SSBP3-212ENST00000528930 MFAP4P55083 255 aa6.31□□□□□ -1.4
SSBP3-212ENST00000528930 SPCS3P61009 180 aa6.31□□□□□ -1.4
SSBP3-212ENST00000528930 KIR3DS1Q14943 382 aa6.31□□□□□ -1.4
SSBP3-212ENST00000528930 Q56UQ5 140 aa6.31□□□□□ -1.4
SSBP3-212ENST00000528930 LINC00322Q6ZN03 302 aaPredicted RBP6.31□□□□□ -1.4
SSBP3-212ENST00000528930 GTSCR1Q86UQ5 136 aa6.31□□□□□ -1.4
SSBP3-212ENST00000528930 TMEM61Q8N0U2 210 aa6.31□□□□□ -1.4
SSBP3-212ENST00000528930 SLC35G3Q8N808 338 aa6.31□□□□□ -1.4
SSBP3-212ENST00000528930 RNASE11Q8TAA1 199 aaKnown RBP6.31□□□□□ -1.4
SSBP3-212ENST00000528930 TXN2Q99757 166 aa6.31□□□□□ -1.4
SSBP3-212ENST00000528930 NIT2Q9NQR4 276 aa6.31□□□□□ -1.4
SSBP3-212ENST00000528930 CACNG5Q9UF02 275 aa6.31□□□□□ -1.4
SSBP3-212ENST00000528930 KCNIP3Q9Y2W7 256 aa6.31□□□□□ -1.4
SSBP3-212ENST00000528930 UFC1Q9Y3C8 167 aa6.31□□□□□ -1.4
SSBP3-212ENST00000528930 TMED3Q9Y3Q3 217 aa6.31□□□□□ -1.4
SSBP3-212ENST00000528930 IGHV3OR16-8A0A075B7F1 116 aa6.3□□□□□ -1.4
SSBP3-212ENST00000528930 K7EMT4 169 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms