RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 HIST1H1EP10412 219 aaKnown RBP14.63□□□□□ -0.07
LTBP3-210ENST00000528516 FAM90A1Q86YD7 464 aa14.63□□□□□ -0.07
LTBP3-210ENST00000528516 PERPQ96FX8 193 aa14.63□□□□□ -0.07
LTBP3-210ENST00000528516 COL4A2P08572 1712 aa14.63□□□□□ -0.07
LTBP3-210ENST00000528516 KBTBD11-OT1A0A1B0GTJ5 212 aa14.63□□□□□ -0.07
LTBP3-210ENST00000528516 FAM231BA6NCW3 169 aa14.63□□□□□ -0.07
LTBP3-210ENST00000528516 ISLRO14498 428 aa14.63□□□□□ -0.07
LTBP3-210ENST00000528516 FAM71F2Q6NXP2 309 aa14.63□□□□□ -0.07
LTBP3-210ENST00000528516 LINC00173Q6ZV60 143 aa14.63□□□□□ -0.07
LTBP3-210ENST00000528516 ZNF207O43670 478 aaKnown RBP14.62□□□□□ -0.07
LTBP3-210ENST00000528516 CD5LO43866 347 aa14.62□□□□□ -0.07
LTBP3-210ENST00000528516 PAX2Q02962 417 aa14.62□□□□□ -0.07
LTBP3-210ENST00000528516 FAM162BQ5T6X4 162 aa14.62□□□□□ -0.07
LTBP3-210ENST00000528516 SRSF12Q8WXF0 261 aaKnown RBP14.62□□□□□ -0.07
LTBP3-210ENST00000528516 NAV3Q8IVL0 2385 aa14.62□□□□□ -0.07
LTBP3-210ENST00000528516 HIGD1CA8MV81 97 aa14.62□□□□□ -0.07
LTBP3-210ENST00000528516 PRSS1P07477 247 aa14.62□□□□□ -0.07
LTBP3-210ENST00000528516 VWC2Q2TAL6 325 aa14.62□□□□□ -0.07
LTBP3-210ENST00000528516 GCSAMQ8N6F7 178 aa14.62□□□□□ -0.07
LTBP3-210ENST00000528516 CHTOPQ9Y3Y2 248 aaKnown RBP14.62□□□□□ -0.07
LTBP3-210ENST00000528516 LY96Q9Y6Y9 160 aa14.62□□□□□ -0.07
LTBP3-210ENST00000528516 TMEM186Q96B77 213 aa14.62□□□□□ -0.07
LTBP3-210ENST00000528516 SYS1-DBNDD2H3BUS1 97 aa14.61□□□□□ -0.07
LTBP3-210ENST00000528516 IGKV1-16P04430 117 aa14.61□□□□□ -0.07
LTBP3-210ENST00000528516 OR52E5Q8NH55 327 aa14.61□□□□□ -0.07
LTBP3-210ENST00000528516 NDFIP1Q9BT67 221 aa14.61□□□□□ -0.07
LTBP3-210ENST00000528516 NPIPB11E5RHQ5 1161 aa14.61□□□□□ -0.07
LTBP3-210ENST00000528516 SMAGPQ0VAQ4 97 aa14.61□□□□□ -0.07
LTBP3-210ENST00000528516 TCF24Q7RTU0 167 aa14.61□□□□□ -0.07
LTBP3-210ENST00000528516 HIVEP2P31629 2446 aa14.61□□□□□ -0.07
LTBP3-210ENST00000528516 NRN1LQ496H8 165 aa14.61□□□□□ -0.07
LTBP3-210ENST00000528516 ZNF138P52744 262 aa14.6□□□□□ -0.07
LTBP3-210ENST00000528516 HIST1H1AQ02539 215 aaPredicted RBP14.6□□□□□ -0.07
LTBP3-210ENST00000528516 OR4C13Q8NGP0 309 aa14.6□□□□□ -0.07
LTBP3-210ENST00000528516 ZNF146Q15072 292 aa14.6□□□□□ -0.07
LTBP3-210ENST00000528516 TBR1Q16650 682 aa14.6□□□□□ -0.07
LTBP3-210ENST00000528516 TIMM23BQ5SRD1 257 aa14.6□□□□□ -0.07
LTBP3-210ENST00000528516 NUP35Q8NFH5 326 aa14.6□□□□□ -0.07
LTBP3-210ENST00000528516 CDX4O14627 284 aaPredicted RBP14.6□□□□□ -0.07
LTBP3-210ENST00000528516 HLA-DRB1P01911 266 aa14.6□□□□□ -0.07
LTBP3-210ENST00000528516 C11orf52Q96A22 123 aa14.6□□□□□ -0.07
LTBP3-210ENST00000528516 GTSF1LQ9H1H1 148 aa14.6□□□□□ -0.07
LTBP3-210ENST00000528516 A6NDN8 102 aa14.6□□□□□ -0.07
LTBP3-210ENST00000528516 AREGP15514 252 aa14.6□□□□□ -0.07
LTBP3-210ENST00000528516 TMEM116Q8NCL8 245 aa14.59□□□□□ -0.07
LTBP3-210ENST00000528516 HIGD1AQ9Y241 93 aa14.59□□□□□ -0.07
LTBP3-210ENST00000528516 DLL1O00548 723 aa14.59□□□□□ -0.07
LTBP3-210ENST00000528516 TMEM249Q2WGJ8 235 aa14.59□□□□□ -0.07
LTBP3-210ENST00000528516 SPATA12Q7Z6I5 190 aa14.59□□□□□ -0.07
LTBP3-210ENST00000528516 NAV2Q8IVL1 2488 aa14.59□□□□□ -0.07
LTBP3-210ENST00000528516 PPIAL4CA0A0B4J2A2 164 aa14.59□□□□□ -0.07
LTBP3-210ENST00000528516 PPIAL4GP0DN37 164 aa14.59□□□□□ -0.07
LTBP3-210ENST00000528516 KLF17Q5JT82 389 aaPredicted RBP14.59□□□□□ -0.07
LTBP3-210ENST00000528516 A0A1W2PRE2 83 aa14.58□□□□□ -0.08
LTBP3-210ENST00000528516 C2orf70A6NJV1 201 aa14.58□□□□□ -0.08
LTBP3-210ENST00000528516 NBEAP1P0C6P0 100 aa14.58□□□□□ -0.08
LTBP3-210ENST00000528516 IGKV1D-17A0A075B6S4 117 aa14.58□□□□□ -0.08
LTBP3-210ENST00000528516 PRSS47A8MTI9 375 aa14.58□□□□□ -0.08
LTBP3-210ENST00000528516 IFI27L2Q9H2X8 130 aa14.58□□□□□ -0.08
LTBP3-210ENST00000528516 IL4P05112 153 aa14.58□□□□□ -0.08
LTBP3-210ENST00000528516 RPS20P60866 119 aaKnown RBP14.58□□□□□ -0.08
LTBP3-210ENST00000528516 TM4SF20Q53R12 229 aa14.58□□□□□ -0.08
LTBP3-210ENST00000528516 TMEM97Q5BJF2 176 aa14.58□□□□□ -0.08
LTBP3-210ENST00000528516 Q8N7P7 452 aa14.58□□□□□ -0.08
LTBP3-210ENST00000528516 C5orf30Q96GV9 206 aa14.58□□□□□ -0.08
LTBP3-210ENST00000528516 SMIM27A0A1W2PRY6 76 aa14.57□□□□□ -0.08
LTBP3-210ENST00000528516 GGTLC3B5MD39 225 aa14.57□□□□□ -0.08
LTBP3-210ENST00000528516 COLCA1Q6ZS62 124 aa14.57□□□□□ -0.08
LTBP3-210ENST00000528516 OR2K2Q8NGT1 345 aa14.57□□□□□ -0.08
LTBP3-210ENST00000528516 RNF138Q8WVD3 245 aa14.57□□□□□ -0.08
LTBP3-210ENST00000528516 DMDP11532 3685 aa14.57□□□□□ -0.08
LTBP3-210ENST00000528516 A8MWL6 223 aa14.57□□□□□ -0.08
LTBP3-210ENST00000528516 OR10AG1Q8NH19 301 aa14.57□□□□□ -0.08
LTBP3-210ENST00000528516 RAB1BQ9H0U4 201 aa14.57□□□□□ -0.08
LTBP3-210ENST00000528516 F5H697 171 aa14.57□□□□□ -0.08
LTBP3-210ENST00000528516 GFRA3O60609 400 aa14.57□□□□□ -0.08
LTBP3-210ENST00000528516 Q6ZR03 302 aa14.57□□□□□ -0.08
LTBP3-210ENST00000528516 SPCS1Q9Y6A9 102 aa14.56□□□□□ -0.08
LTBP3-210ENST00000528516 IGLC1P0CG04 106 aa14.56□□□□□ -0.08
LTBP3-210ENST00000528516 NMUP48645 174 aa14.56□□□□□ -0.08
LTBP3-210ENST00000528516 IGFBPL1Q8WX77 278 aa14.56□□□□□ -0.08
LTBP3-210ENST00000528516 SLC25A33Q9BSK2 321 aa14.56□□□□□ -0.08
LTBP3-210ENST00000528516 MAP1AP78559 2803 aaPredicted RBP14.56□□□□□ -0.08
LTBP3-210ENST00000528516 IGHV1-46P01743 117 aa14.56□□□□□ -0.08
LTBP3-210ENST00000528516 GRAMD2BQ96HH9 432 aa14.56□□□□□ -0.08
LTBP3-210ENST00000528516 KLK15Q9H2R5 256 aa14.56□□□□□ -0.08
LTBP3-210ENST00000528516 HSPB8Q9UJY1 196 aa14.56□□□□□ -0.08
LTBP3-210ENST00000528516 TRAV8-1A0A0A6YYK1 113 aa14.55□□□□□ -0.08
LTBP3-210ENST00000528516 DEFB104AQ8WTQ1 72 aa14.55□□□□□ -0.08
LTBP3-210ENST00000528516 FOXA2Q9Y261 457 aaPredicted RBP14.55□□□□□ -0.08
LTBP3-210ENST00000528516 JMJD1CQ15652 2540 aa14.55□□□□□ -0.08
LTBP3-210ENST00000528516 HBBP68871 147 aa14.55□□□□□ -0.08
LTBP3-210ENST00000528516 C18orf15Q96N68 181 aa14.55□□□□□ -0.08
LTBP3-210ENST00000528516 SRRM5B3KS81 715 aa14.54□□□□□ -0.08
LTBP3-210ENST00000528516 SS18L1O75177 396 aaPredicted RBP14.54□□□□□ -0.08
LTBP3-210ENST00000528516 LIPFP07098 398 aa14.54□□□□□ -0.08
LTBP3-210ENST00000528516 MDS2Q8NDY4 140 aa14.54□□□□□ -0.08
LTBP3-210ENST00000528516 ARHGAP32A7KAX9 2087 aa14.54□□□□□ -0.08
LTBP3-210ENST00000528516 BRWD1-AS2P59051 145 aa14.54□□□□□ -0.08
LTBP3-210ENST00000528516 MBNL3Q9NUK0 354 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 284.8 ms