RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 DOK5Q9P104 306 aa11.35□□□□□ -0.59
CAPN1-213ENST00000527897 FBXL17Q9UF56 701 aa11.35□□□□□ -0.59
CAPN1-213ENST00000527897 FAM240BA0A1B0GVZ2 78 aa11.34□□□□□ -0.59
CAPN1-213ENST00000527897 C5orf51A6NDU8 294 aa11.34□□□□□ -0.59
CAPN1-213ENST00000527897 CFDP00746 253 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-213ENST00000527897 H2AFB2P0C5Z0 115 aa11.34□□□□□ -0.59
CAPN1-213ENST00000527897 PLECQ15149 4684 aaKnown RBP11.34□□□□□ -0.59
CAPN1-213ENST00000527897 TMEM182Q6ZP80 229 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-213ENST00000527897 TMEM147Q9BVK8 224 aa11.34□□□□□ -0.59
CAPN1-213ENST00000527897 WDR12Q9GZL7 423 aaKnown RBP11.34□□□□□ -0.59
CAPN1-213ENST00000527897 RCL1Q9Y2P8 373 aaKnown RBP11.34□□□□□ -0.59
CAPN1-213ENST00000527897 NUPR2A6NF83 97 aa11.33□□□□□ -0.6
CAPN1-213ENST00000527897 L7N2F9 121 aa11.33□□□□□ -0.6
CAPN1-213ENST00000527897 IGKV3-20P01619 116 aa11.33□□□□□ -0.6
CAPN1-213ENST00000527897 IL5P05113 134 aa11.33□□□□□ -0.6
CAPN1-213ENST00000527897 GIG44P09565 113 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-213ENST00000527897 ID1P41134 155 aa11.33□□□□□ -0.6
CAPN1-213ENST00000527897 PAX9P55771 341 aa11.33□□□□□ -0.6
CAPN1-213ENST00000527897 DEFB1P60022 68 aa11.33□□□□□ -0.6
CAPN1-213ENST00000527897 VAMP2P63027 116 aa11.33□□□□□ -0.6
CAPN1-213ENST00000527897 C1orf194Q5T5A4 169 aa11.33□□□□□ -0.6
CAPN1-213ENST00000527897 CYP2G1PQ6ZSU1 146 aa11.33□□□□□ -0.6
CAPN1-213ENST00000527897 TMEM144Q7Z5S9 345 aa11.33□□□□□ -0.6
CAPN1-213ENST00000527897 OR10P1Q8NGE3 313 aa11.33□□□□□ -0.6
CAPN1-213ENST00000527897 ZNF431Q8TF32 576 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-213ENST00000527897 S100ZQ8WXG8 99 aa11.33□□□□□ -0.6
CAPN1-213ENST00000527897 LSM5Q9Y4Y9 91 aaKnown RBP11.33□□□□□ -0.6
CAPN1-213ENST00000527897 HYDINQ4G0P3 5121 aa11.32□□□□□ -0.6
CAPN1-213ENST00000527897 MBPP02686 304 aaPredicted RBP11.32□□□□□ -0.6
CAPN1-213ENST00000527897 NANOS2P60321 138 aaKnown RBP11.32□□□□□ -0.6
CAPN1-213ENST00000527897 TMEM41BQ5BJD5 291 aa11.32□□□□□ -0.6
CAPN1-213ENST00000527897 MZT2BQ6NZ67 158 aa11.32□□□□□ -0.6
CAPN1-213ENST00000527897 CEMP1Q6PRD7 247 aaPredicted RBP11.32□□□□□ -0.6
CAPN1-213ENST00000527897 SLC25A32Q9H2D1 315 aa11.32□□□□□ -0.6
CAPN1-213ENST00000527897 SEPSECSQ9HD40 501 aaKnown RBP11.32□□□□□ -0.6
CAPN1-213ENST00000527897 XCL2Q9UBD3 114 aa11.32□□□□□ -0.6
CAPN1-213ENST00000527897 MGAT4CQ9UBM8 478 aa11.32□□□□□ -0.6
CAPN1-213ENST00000527897 ZNF98A6NK75 572 aa11.31□□□□□ -0.6
CAPN1-213ENST00000527897 PMS2P5A8MQ11 134 aa11.31□□□□□ -0.6
CAPN1-213ENST00000527897 H3BMM0 161 aa11.31□□□□□ -0.6
CAPN1-213ENST00000527897 TSC22D2O75157 780 aa11.31□□□□□ -0.6
CAPN1-213ENST00000527897 ATF4P18848 351 aaPredicted RBP11.31□□□□□ -0.6
CAPN1-213ENST00000527897 GALR1P47211 349 aa11.31□□□□□ -0.6
CAPN1-213ENST00000527897 BCAP31P51572 246 aa11.31□□□□□ -0.6
CAPN1-213ENST00000527897 NUTF2P61970 127 aaKnown RBP11.31□□□□□ -0.6
CAPN1-213ENST00000527897 DLK1P80370 383 aa11.31□□□□□ -0.6
CAPN1-213ENST00000527897 GDF5OSQ5U4N7 250 aa11.31□□□□□ -0.6
CAPN1-213ENST00000527897 TMEM14EPQ6UXP3 125 aa11.31□□□□□ -0.6
CAPN1-213ENST00000527897 C12orf45Q8N5I9 185 aaPredicted RBP11.31□□□□□ -0.6
CAPN1-213ENST00000527897 C11orf45Q8TAV5 145 aa11.31□□□□□ -0.6
CAPN1-213ENST00000527897 PHLDA1Q8WV24 401 aaPredicted RBP11.31□□□□□ -0.6
CAPN1-213ENST00000527897 C16orf92Q96LL3 132 aa11.31□□□□□ -0.6
CAPN1-213ENST00000527897 RSG1Q9BU20 258 aa11.31□□□□□ -0.6
CAPN1-213ENST00000527897 C11orf68Q9H3H3 251 aaKnown RBP11.31□□□□□ -0.6
CAPN1-213ENST00000527897 TBC1D24Q9ULP9 559 aa11.31□□□□□ -0.6
CAPN1-213ENST00000527897 ALMS1Q8TCU4 4167 aa11.31□□□□□ -0.6
CAPN1-213ENST00000527897 C7orf66A4D0T2 115 aa11.3□□□□□ -0.6
CAPN1-213ENST00000527897 OR5G3P0C626 314 aa11.3□□□□□ -0.6
CAPN1-213ENST00000527897 LINC00869P0C866 280 aa11.3□□□□□ -0.6
CAPN1-213ENST00000527897 HLA-DRB4P13762 266 aa11.3□□□□□ -0.6
CAPN1-213ENST00000527897 S100A7P31151 101 aa11.3□□□□□ -0.6
CAPN1-213ENST00000527897 PSMB3P49720 205 aa11.3□□□□□ -0.6
CAPN1-213ENST00000527897 FXYD7P58549 80 aa11.3□□□□□ -0.6
CAPN1-213ENST00000527897 TAS2R30P59541 319 aa11.3□□□□□ -0.6
CAPN1-213ENST00000527897 RAP2BP61225 183 aa11.3□□□□□ -0.6
CAPN1-213ENST00000527897 FGL1Q08830 312 aa11.3□□□□□ -0.6
CAPN1-213ENST00000527897 SLC38A11Q08AI6 406 aa11.3□□□□□ -0.6
CAPN1-213ENST00000527897 OR4B1Q8NGF8 309 aa11.3□□□□□ -0.6
CAPN1-213ENST00000527897 SCRT1Q9BWW7 348 aa11.3□□□□□ -0.6
CAPN1-213ENST00000527897 KLK5Q9Y337 293 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-213ENST00000527897 HLA-DRB4X5D2U9 266 aa11.3□□□□□ -0.6
CAPN1-213ENST00000527897 DNAH1Q9P2D7 4330 aa11.29□□□□□ -0.6
CAPN1-213ENST00000527897 IGHV4-28A0A0C4DH34 117 aa11.29□□□□□ -0.6
CAPN1-213ENST00000527897 HYPMO75409 117 aa11.29□□□□□ -0.6
CAPN1-213ENST00000527897 S100A10P60903 97 aa11.29□□□□□ -0.6
CAPN1-213ENST00000527897 ARL16Q0P5N6 197 aa11.29□□□□□ -0.6
CAPN1-213ENST00000527897 LINC00299Q6ZSB3 139 aa11.29□□□□□ -0.6
CAPN1-213ENST00000527897 ENKURQ8TC29 256 aa11.29□□□□□ -0.6
CAPN1-213ENST00000527897 C1QTNF4Q9BXJ3 329 aa11.29□□□□□ -0.6
CAPN1-213ENST00000527897 NPVFQ9HCQ7 196 aa11.29□□□□□ -0.6
CAPN1-213ENST00000527897 SLC45A2Q9UMX9 530 aa11.29□□□□□ -0.6
CAPN1-213ENST00000527897 HIGD1AQ9Y241 93 aa11.29□□□□□ -0.6
CAPN1-213ENST00000527897 A6NHS1 94 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 F6UB75 175 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 K7EPK0 472 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 ISLRO14498 428 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 SOCS3O14543 225 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 LY6G6CO95867 125 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 MIFP14174 115 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 MEOX2P50222 304 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 CAV2P51636 162 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 SELENOTP62341 195 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 ASAH1Q13510 395 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 EBLN2Q6P2I7 272 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 TEPPQ6URK8 271 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 FOXI2Q6ZQN5 318 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 Q8NAQ8 132 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 C2orf50Q96LR7 162 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 UHRF2Q96PU4 802 aa11.28□□□□□ -0.6
CAPN1-213ENST00000527897 SLC25A39Q9BZJ4 359 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms