RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 TMEM256Q8N2U0 113 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 SLC25A39Q9BZJ4 359 aaPredicted RBP6.01□□□□□ -1.45
CTNND1-216ENST00000527467 C14orf132Q9NPU4 83 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 NCOR1O75376 2440 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 LOC102723996A0A087X1L8 192 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 MRPL23Q16540 153 aaKnown RBP6□□□□□ -1.45
CTNND1-216ENST00000527467 TAL2Q16559 108 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 SLC22A18ASQ8N1D0 253 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 BMPERQ8N8U9 685 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 ZNF501Q96CX3 271 aaPredicted RBP6□□□□□ -1.45
CTNND1-216ENST00000527467 RNF125Q96EQ8 232 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 METRNQ9UJH8 293 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 CITO14578 2027 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 FAM240AA0A1B0GVK7 77 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 SHISA9B4DS77 424 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 ZNF703Q9H7S9 590 aaPredicted RBP6□□□□□ -1.45
CTNND1-216ENST00000527467 SCRT2Q9NQ03 307 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 DPM3Q9P2X0 92 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 A0A1W2PPM0 123 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 FNDC10F2Z333 226 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 RS1O15537 224 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 CDKN1AP38936 164 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 ZIC1Q15915 447 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 RPL39P5Q59GN2 51 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 ZSWIM8A7E2V4 1837 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 TMEM14DPA8MWL7 114 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 EFEMP2O95967 443 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 CELA2BP08218 269 aaPredicted RBP6□□□□□ -1.45
CTNND1-216ENST00000527467 PSMB8P28062 276 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 ZPLD1Q8TCW7 415 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 NTN5Q8WTR8 489 aaPredicted RBP6□□□□□ -1.45
CTNND1-216ENST00000527467 RCHY1Q96PM5 261 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 CSTL1Q9H114 145 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 PRO1854Q9UHT4 67 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 ZNF318Q5VUA4 2279 aa6□□□□□ -1.45
CTNND1-216ENST00000527467 TRAV12-2A0A075B6T6 113 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 IGHV1-24A0A0C4DH33 117 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 SRSF3P84103 164 aaKnown RBP5.99□□□□□ -1.45
CTNND1-216ENST00000527467 VN1R4Q7Z5H5 301 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 VWCEQ96DN2 955 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 FOCADQ5VW36 1801 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 IGHV3OR16-8A0A075B7F1 116 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 FGF16O43320 207 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 GAS1P54826 345 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 KLF5Q13887 457 aaPredicted RBP5.99□□□□□ -1.45
CTNND1-216ENST00000527467 IMMP1LQ96LU5 166 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 PKIGQ9Y2B9 76 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 TRAV13-2A0A0B4J235 113 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 CCL3P10147 92 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 RNF115Q9Y4L5 304 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 TDRD15B5MCY1 1934 aaKnown RBP5.99□□□□□ -1.45
CTNND1-216ENST00000527467 TCRBV4S1A1TA0A5B7 111 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 PRB1P04280 392 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 CTSBP07858 339 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 PYYP10082 97 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 CMC4P56277 68 aaPredicted RBP5.99□□□□□ -1.45
CTNND1-216ENST00000527467 LYZL1Q6UWQ5 148 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 ACP7Q6ZNF0 438 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 FAM90A1Q86YD7 464 aa5.99□□□□□ -1.45
CTNND1-216ENST00000527467 APC2O95996 2303 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 TRAV14DV4A0A0A6YYC5 116 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 RHODO00212 210 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 COX5BP10606 129 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 IGFBP6P24592 240 aaPredicted RBP5.98□□□□□ -1.45
CTNND1-216ENST00000527467 HLA-DMBP28068 263 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 PGFP49763 221 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 ZNF474Q6S9Z5 364 aaPredicted RBP5.98□□□□□ -1.45
CTNND1-216ENST00000527467 ZNF843Q8N446 348 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 RFLNBQ8N5W9 214 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 C3orf56Q8N813 242 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 LINC01555Q8NAE3 123 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 SIGLEC12Q96PQ1 595 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 IGLV3-16A0A075B6K0 115 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 TRAV40A0A0B4J280 105 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 FXYD7P58549 80 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 STPG4Q8N801 248 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 C17orf98A8MV24 154 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 SCN5AQ14524 2016 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 IGFBPL1Q8WX77 278 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 VSIRQ9H7M9 311 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 ZNF561-AS1K7EIQ3 104 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 TM4SF5O14894 197 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 IGKV1D-33P01593 117 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 IGKV1-33P01594 117 aa5.98□□□□□ -1.45
CTNND1-216ENST00000527467 A0A0U1RQV1 116 aa5.97□□□□□ -1.45
CTNND1-216ENST00000527467 F8VVB4 439 aa5.97□□□□□ -1.45
CTNND1-216ENST00000527467 F8VWA3 439 aa5.97□□□□□ -1.45
CTNND1-216ENST00000527467 H3BMG7 143 aa5.97□□□□□ -1.45
CTNND1-216ENST00000527467 SLC25A47Q6Q0C1 308 aa5.97□□□□□ -1.45
CTNND1-216ENST00000527467 POLR3KQ9Y2Y1 108 aaPredicted RBP5.97□□□□□ -1.45
CTNND1-216ENST00000527467 NDUFB1O75438 58 aa5.97□□□□□ -1.45
CTNND1-216ENST00000527467 IGLC2P0DOY2 106 aa5.97□□□□□ -1.45
CTNND1-216ENST00000527467 IGLC3P0DOY3 106 aa5.97□□□□□ -1.45
CTNND1-216ENST00000527467 HLA-DRB4P13762 266 aa5.97□□□□□ -1.45
CTNND1-216ENST00000527467 SLC25A16P16260 332 aa5.97□□□□□ -1.45
CTNND1-216ENST00000527467 FUSP35637 526 aaKnown RBP eCLIP5.97□□□□□ -1.45
CTNND1-216ENST00000527467 MDS2Q8NDY4 140 aa5.97□□□□□ -1.45
CTNND1-216ENST00000527467 LY96Q9Y6Y9 160 aa5.97□□□□□ -1.45
CTNND1-216ENST00000527467 HLA-DRB4X5D2U9 266 aa5.97□□□□□ -1.45
CTNND1-216ENST00000527467 PCM1Q15154 2024 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms