RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 ZBTB8BQ8NAP8 495 aaPredicted RBP13.49□□□□□ -0.25
TSPAN4-216ENST00000526055 BPIFCQ8NFQ6 507 aa13.49□□□□□ -0.25
TSPAN4-216ENST00000526055 OR11H2Q8NH07 326 aa13.49□□□□□ -0.25
TSPAN4-216ENST00000526055 PPP1R14BQ96C90 147 aa13.49□□□□□ -0.25
TSPAN4-216ENST00000526055 NUPR2A6NF83 97 aa13.48□□□□□ -0.25
TSPAN4-216ENST00000526055 ID1P41134 155 aa13.48□□□□□ -0.25
TSPAN4-216ENST00000526055 DLK1P80370 383 aa13.48□□□□□ -0.25
TSPAN4-216ENST00000526055 ACTL10Q5JWF8 245 aa13.48□□□□□ -0.25
TSPAN4-216ENST00000526055 TMEM14EPQ6UXP3 125 aa13.48□□□□□ -0.25
TSPAN4-216ENST00000526055 ZNF431Q8TF32 576 aaPredicted RBP13.48□□□□□ -0.25
TSPAN4-216ENST00000526055 KNCNA6PVL3 124 aa13.47□□□□□ -0.25
TSPAN4-216ENST00000526055 PMS2P5A8MQ11 134 aa13.47□□□□□ -0.25
TSPAN4-216ENST00000526055 PAX9P55771 341 aa13.47□□□□□ -0.25
TSPAN4-216ENST00000526055 NUTF2P61970 127 aaKnown RBP13.47□□□□□ -0.25
TSPAN4-216ENST00000526055 OR8I2Q8N0Y5 310 aa13.47□□□□□ -0.25
TSPAN4-216ENST00000526055 OR10P1Q8NGE3 313 aa13.47□□□□□ -0.25
TSPAN4-216ENST00000526055 GPN1Q9HCN4 374 aaPredicted RBP13.47□□□□□ -0.25
TSPAN4-216ENST00000526055 GSKIPQ9P0R6 139 aa13.47□□□□□ -0.25
TSPAN4-216ENST00000526055 SACSQ9NZJ4 4579 aa13.47□□□□□ -0.25
TSPAN4-216ENST00000526055 CXorf65A6NEN9 183 aa13.46□□□□□ -0.25
TSPAN4-216ENST00000526055 PRAF2O60831 178 aa13.46□□□□□ -0.25
TSPAN4-216ENST00000526055 SCGB1D2O95969 90 aa13.46□□□□□ -0.25
TSPAN4-216ENST00000526055 IL5P05113 134 aa13.46□□□□□ -0.25
TSPAN4-216ENST00000526055 GIG44P09565 113 aaPredicted RBP13.46□□□□□ -0.25
TSPAN4-216ENST00000526055 PSMB3P49720 205 aa13.46□□□□□ -0.25
TSPAN4-216ENST00000526055 MEOX2P50222 304 aa13.46□□□□□ -0.25
TSPAN4-216ENST00000526055 SELENOTP62341 195 aa13.46□□□□□ -0.25
TSPAN4-216ENST00000526055 GPR82Q96P67 336 aa13.46□□□□□ -0.25
TSPAN4-216ENST00000526055 AGRNO00468 2067 aa13.45□□□□□ -0.26
TSPAN4-216ENST00000526055 GALR1P47211 349 aa13.45□□□□□ -0.26
TSPAN4-216ENST00000526055 EWSR1Q01844 656 aaKnown RBP eCLIP13.45□□□□□ -0.262e-6■■■■□ 21.7
TSPAN4-216ENST00000526055 CYP2G1PQ6ZSU1 146 aa13.45□□□□□ -0.26
TSPAN4-216ENST00000526055 S100A7AQ86SG5 101 aa13.45□□□□□ -0.26
TSPAN4-216ENST00000526055 TMEM147Q9BVK8 224 aa13.45□□□□□ -0.26
TSPAN4-216ENST00000526055 GGACTQ9BVM4 153 aa13.45□□□□□ -0.26
TSPAN4-216ENST00000526055 C1QTNF4Q9BXJ3 329 aa13.45□□□□□ -0.26
TSPAN4-216ENST00000526055 MFFQ9GZY8 342 aa13.45□□□□□ -0.26
TSPAN4-216ENST00000526055 NPVFQ9HCQ7 196 aa13.45□□□□□ -0.26
TSPAN4-216ENST00000526055 RCL1Q9Y2P8 373 aaKnown RBP13.45□□□□□ -0.26
TSPAN4-216ENST00000526055 SMCO3A2RU48 225 aa13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 INMT-MINDY4F8WBC2 141 aa13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 H3BMM0 161 aa13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 K7EPK0 472 aa13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 ISLRO14498 428 aa13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 SOCS3O14543 225 aa13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 PTTG1O95997 202 aa13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 MBPP02686 304 aaPredicted RBP13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 HLA-DRB4P13762 266 aa13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 PLP1P60201 277 aa13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 SPATA31B1PQ5VZV4 182 aa13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 CEMP1Q6PRD7 247 aaPredicted RBP13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 C12orf45Q8N5I9 185 aaPredicted RBP13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 CLUHP3Q96NS8 147 aa13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 SEC22CQ9BRL7 303 aa13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 MARVELD1Q9BSK0 173 aa13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 MGAT4CQ9UBM8 478 aa13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 KLK5Q9Y337 293 aaPredicted RBP13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 HLA-DRB4X5D2U9 266 aa13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 RYR2Q92736 4967 aa13.44□□□□□ -0.26
TSPAN4-216ENST00000526055 ZNF98A6NK75 572 aa13.43□□□□□ -0.26
TSPAN4-216ENST00000526055 ZNF705EA8MWA4 302 aaPredicted RBP13.43□□□□□ -0.26
TSPAN4-216ENST00000526055 METTL15P1P0C7V9 234 aa13.43□□□□□ -0.26
TSPAN4-216ENST00000526055 MIFP14174 115 aa13.43□□□□□ -0.26
TSPAN4-216ENST00000526055 ORM2P19652 201 aa13.43□□□□□ -0.26
TSPAN4-216ENST00000526055 C4BPBP20851 252 aa13.43□□□□□ -0.26
TSPAN4-216ENST00000526055 PMS2P11Q13670 270 aa13.43□□□□□ -0.26
TSPAN4-216ENST00000526055 FOXI2Q6ZQN5 318 aa13.43□□□□□ -0.26
TSPAN4-216ENST00000526055 OR1B1Q8NGR6 318 aa13.43□□□□□ -0.26
TSPAN4-216ENST00000526055 RNF24Q9Y225 148 aa13.43□□□□□ -0.26
TSPAN4-216ENST00000526055 C7orf66A4D0T2 115 aa13.42□□□□□ -0.26
TSPAN4-216ENST00000526055 L7N2F9 121 aa13.42□□□□□ -0.26
TSPAN4-216ENST00000526055 VAMP2P63027 116 aa13.42□□□□□ -0.26
TSPAN4-216ENST00000526055 TEPPQ6URK8 271 aa13.42□□□□□ -0.26
TSPAN4-216ENST00000526055 TMEM182Q6ZP80 229 aaPredicted RBP13.42□□□□□ -0.26
TSPAN4-216ENST00000526055 C2orf50Q96LR7 162 aa13.42□□□□□ -0.26
TSPAN4-216ENST00000526055 SAV1Q9H4B6 383 aaPredicted RBP13.42□□□□□ -0.26
TSPAN4-216ENST00000526055 C5orf51A6NDU8 294 aa13.41□□□□□ -0.26
TSPAN4-216ENST00000526055 CCSO14618 274 aa13.41□□□□□ -0.26
TSPAN4-216ENST00000526055 DEDDO75618 318 aa13.41□□□□□ -0.26
TSPAN4-216ENST00000526055 GATA2P23769 480 aaPredicted RBP13.41□□□□□ -0.26
TSPAN4-216ENST00000526055 RAP2BP61225 183 aa13.41□□□□□ -0.26
TSPAN4-216ENST00000526055 PXDC1Q5TGL8 231 aa13.41□□□□□ -0.26
TSPAN4-216ENST00000526055 Q8NAQ8 132 aa13.41□□□□□ -0.26
TSPAN4-216ENST00000526055 CSNK1G2-AS1Q8NCQ2 148 aa13.41□□□□□ -0.26
TSPAN4-216ENST00000526055 C11orf45Q8TAV5 145 aa13.41□□□□□ -0.26
TSPAN4-216ENST00000526055 LINC00052Q96N35 136 aa13.41□□□□□ -0.26
TSPAN4-216ENST00000526055 SLC25A32Q9H2D1 315 aa13.41□□□□□ -0.26
TSPAN4-216ENST00000526055 FAM25EA8MYX2 175 aa13.4□□□□□ -0.26
TSPAN4-216ENST00000526055 HYPMO75409 117 aa13.4□□□□□ -0.26
TSPAN4-216ENST00000526055 CCNKO75909 580 aa13.4□□□□□ -0.26
TSPAN4-216ENST00000526055 RRAS2P62070 204 aaPredicted RBP13.4□□□□□ -0.26
TSPAN4-216ENST00000526055 SHANK2-AS3Q9BTD1 123 aa13.4□□□□□ -0.26
TSPAN4-216ENST00000526055 SLC25A39Q9BZJ4 359 aaPredicted RBP13.4□□□□□ -0.26
TSPAN4-216ENST00000526055 HRH4Q9H3N8 390 aa13.4□□□□□ -0.26
TSPAN4-216ENST00000526055 SLC25A22Q9H936 323 aa13.4□□□□□ -0.26
TSPAN4-216ENST00000526055 HIGD1AQ9Y241 93 aa13.4□□□□□ -0.26
TSPAN4-216ENST00000526055 DNAH1Q9P2D7 4330 aa13.4□□□□□ -0.27
TSPAN4-216ENST00000526055 H3BRN7 92 aa13.39□□□□□ -0.27
TSPAN4-216ENST00000526055 LINC00869P0C866 280 aa13.39□□□□□ -0.27
TSPAN4-216ENST00000526055 RPL7P18124 248 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms