RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 Q8NAQ8 132 aa4.76□□□□□ -1.65
CD44-221ENST00000526000 SLC24A4Q8NFF2 622 aa4.76□□□□□ -1.65
CD44-221ENST00000526000 TXN2Q99757 166 aa4.76□□□□□ -1.65
CD44-221ENST00000526000 GGACTQ9BVM4 153 aa4.76□□□□□ -1.65
CD44-221ENST00000526000 C11orf68Q9H3H3 251 aaKnown RBP4.76□□□□□ -1.65
CD44-221ENST00000526000 RBKSQ9H477 322 aa4.76□□□□□ -1.65
CD44-221ENST00000526000 GSKIPQ9P0R6 139 aa4.76□□□□□ -1.65
CD44-221ENST00000526000 STRAPQ9Y3F4 350 aaKnown RBP4.76□□□□□ -1.65
CD44-221ENST00000526000 PUS1Q9Y606 427 aaKnown RBP eCLIP4.76□□□□□ -1.65
CD44-221ENST00000526000 IGHV3OR16-12A0A075B7B8 117 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 DEFB131BA0A096LNP1 70 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 A0A1B0GVY2 172 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 C11orf94C9JXX5 98 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 FNDC10F2Z333 226 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 K7EPK0 472 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 CCSO14618 274 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 RTL8CO15255 209 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 TMEM50AO95807 157 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 IFNA10P01566 189 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 IGKV3-20P01619 116 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 RNASE2P10153 161 aaKnown RBP4.75□□□□□ -1.65
CD44-221ENST00000526000 SLC25A4P12235 298 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 C4BPBP20851 252 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 NPPCP23582 126 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 GPX4P36969 197 aaPredicted RBP4.75□□□□□ -1.65
CD44-221ENST00000526000 P2RY1P47900 373 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 NPBWR1P48145 328 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 H2BFSP57053 126 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 FXYD7P58549 80 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 BAXQ07812 192 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 FCN2Q15485 313 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 C12orf74Q32Q52 190 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 PRSS54Q6PEW0 395 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 LINC00336Q6ZUF6 198 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 ZNF575Q86XF7 245 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 PPP1R1CQ8WVI7 109 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 GINS3Q9BRX5 216 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 SLC25A31Q9H0C2 315 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 VSIRQ9H7M9 311 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 MRPL36Q9P0J6 103 aaKnown RBP4.75□□□□□ -1.65
CD44-221ENST00000526000 XCL2Q9UBD3 114 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 RCL1Q9Y2P8 373 aaKnown RBP4.75□□□□□ -1.65
CD44-221ENST00000526000 X6R8D5 127 aa4.75□□□□□ -1.65
CD44-221ENST00000526000 KIAA1109Q2LD37 5005 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 TRAV30A0A087WSZ9 112 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 K7EQG2 157 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 SSSCA1O60232 199 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 MPC2O95563 127 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 SCGB1D2O95969 90 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 MED14OSP0DP75 135 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 HTN3P15516 51 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 NUP62P37198 522 aaPredicted RBP4.74□□□□□ -1.65
CD44-221ENST00000526000 BCAP31P51572 246 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 TCTAP57738 103 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 DEFB1P60022 68 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 S100A10P60903 97 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 POLR2GP62487 172 aaKnown RBP eCLIP4.74□□□□□ -1.65
CD44-221ENST00000526000 HBG1P69891 147 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 HBG2P69892 147 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 RAB32Q13637 225 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 ATP6V1FQ16864 119 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 TIGITQ495A1 244 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 TMEM14EPQ6UXP3 125 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 ZNF600Q6ZNG1 722 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 TRPT1Q86TN4 253 aaKnown RBP4.74□□□□□ -1.65
CD44-221ENST00000526000 STX12Q86Y82 276 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 POM121L12Q8N7R1 296 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 OR11H7Q8NGC8 314 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 THAP6Q8TBB0 222 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 MAGT1Q9H0U3 335 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 LYRM2Q9NU23 88 aaPredicted RBP4.74□□□□□ -1.65
CD44-221ENST00000526000 PSENENQ9NZ42 101 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 LSM5Q9Y4Y9 91 aaKnown RBP4.74□□□□□ -1.65
CD44-221ENST00000526000 MUC4Q99102 2169 aa4.74□□□□□ -1.65
CD44-221ENST00000526000 SIX6O95475 246 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 CFDP00746 253 aaPredicted RBP4.73□□□□□ -1.65
CD44-221ENST00000526000 FABP1P07148 127 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 IAPPP10997 89 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 MIFP14174 115 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 CXCL3P19876 107 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 S100A11P31949 105 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 OPRK1P41145 380 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 SULT1A1P50225 295 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 PAX9P55771 341 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 DLK1P80370 383 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 PSMG4Q5JS54 123 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 SPANXN5Q5MJ07 72 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 UBE2DNLQ8IWF7 75 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 OR10P1Q8NGE3 313 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 OR4X1Q8NH49 305 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 SLC35E1Q96K37 410 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 METTL26Q96S19 204 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 RNF126Q9BV68 326 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 C11orf1Q9H5F2 150 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 ZFAND3Q9H8U3 227 aa4.73□□□□□ -1.65
CD44-221ENST00000526000 VPS13DQ5THJ4 4388 aa4.72□□□□□ -1.65
CD44-221ENST00000526000 A0A1W2PS18 150 aa4.72□□□□□ -1.65
CD44-221ENST00000526000 ZNF705EA8MWA4 302 aaPredicted RBP4.72□□□□□ -1.65
CD44-221ENST00000526000 CLN5O75503 358 aa4.72□□□□□ -1.65
CD44-221ENST00000526000 S100A7P31151 101 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms