RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 AGRNO00468 2067 aa8.44□□□□□ -1.06
HIF3A-209ENST00000525854 EPPK1P58107 5090 aaKnown RBP8.43□□□□□ -1.06
HIF3A-209ENST00000525854 IGKV1OR2-108A0A075B7D4 117 aa8.43□□□□□ -1.06
HIF3A-209ENST00000525854 PRSS46E5RG02 174 aa8.43□□□□□ -1.06
HIF3A-209ENST00000525854 ISLRO14498 428 aa8.43□□□□□ -1.06
HIF3A-209ENST00000525854 RBMY1A1P0DJD3 496 aaKnown RBP8.43□□□□□ -1.06
HIF3A-209ENST00000525854 RBMY1CP0DJD4 496 aa8.43□□□□□ -1.06
HIF3A-209ENST00000525854 GALR1P47211 349 aa8.43□□□□□ -1.06
HIF3A-209ENST00000525854 MEOX2P50222 304 aa8.43□□□□□ -1.06
HIF3A-209ENST00000525854 ID3Q02535 119 aa8.43□□□□□ -1.06
HIF3A-209ENST00000525854 AKR1C1Q04828 323 aa8.43□□□□□ -1.06
HIF3A-209ENST00000525854 RBMY1FQ15415 496 aaKnown RBP8.43□□□□□ -1.06
HIF3A-209ENST00000525854 CNPY1Q3B7I2 92 aa8.43□□□□□ -1.06
HIF3A-209ENST00000525854 C4orf46Q504U0 113 aa8.43□□□□□ -1.06
HIF3A-209ENST00000525854 SPATA31B1PQ5VZV4 182 aa8.43□□□□□ -1.06
HIF3A-209ENST00000525854 FOXI2Q6ZQN5 318 aa8.43□□□□□ -1.06
HIF3A-209ENST00000525854 BPIFCQ8NFQ6 507 aa8.43□□□□□ -1.06
HIF3A-209ENST00000525854 WDR12Q9GZL7 423 aaKnown RBP8.43□□□□□ -1.06
HIF3A-209ENST00000525854 XCL2Q9UBD3 114 aa8.43□□□□□ -1.06
HIF3A-209ENST00000525854 LINC00854A0A1B0GVQ3 168 aa8.42□□□□□ -1.06
HIF3A-209ENST00000525854 H3BP45 60 aa8.42□□□□□ -1.06
HIF3A-209ENST00000525854 ADAP1O75689 374 aa8.42□□□□□ -1.06
HIF3A-209ENST00000525854 OR4E1P0C645 316 aa8.42□□□□□ -1.06
HIF3A-209ENST00000525854 HLA-DMBP28068 263 aa8.42□□□□□ -1.06
HIF3A-209ENST00000525854 ACOT7LQ6ZUV0 252 aa8.42□□□□□ -1.06
HIF3A-209ENST00000525854 OR4D5Q8NGN0 318 aa8.42□□□□□ -1.06
HIF3A-209ENST00000525854 CLUHP3Q96NS8 147 aa8.42□□□□□ -1.06
HIF3A-209ENST00000525854 TMEM147Q9BVK8 224 aa8.42□□□□□ -1.06
HIF3A-209ENST00000525854 SAV1Q9H4B6 383 aaPredicted RBP8.42□□□□□ -1.06
HIF3A-209ENST00000525854 FLVCR2Q9UPI3 526 aa8.42□□□□□ -1.06
HIF3A-209ENST00000525854 BIRC6Q9NR09 4857 aa8.41□□□□□ -1.06
HIF3A-209ENST00000525854 IGLL5B9A064 214 aa8.41□□□□□ -1.06
HIF3A-209ENST00000525854 SOCS3O14543 225 aa8.41□□□□□ -1.06
HIF3A-209ENST00000525854 ORM2P19652 201 aa8.41□□□□□ -1.06
HIF3A-209ENST00000525854 POLR2GP62487 172 aaKnown RBP eCLIP8.41□□□□□ -1.06
HIF3A-209ENST00000525854 EBLN2Q6P2I7 272 aa8.41□□□□□ -1.06
HIF3A-209ENST00000525854 TMEM144Q7Z5S9 345 aa8.41□□□□□ -1.06
HIF3A-209ENST00000525854 SMIM8Q96KF7 97 aa8.41□□□□□ -1.06
HIF3A-209ENST00000525854 GPR82Q96P67 336 aa8.41□□□□□ -1.06
HIF3A-209ENST00000525854 SDHCQ99643 169 aaPredicted RBP8.41□□□□□ -1.06
HIF3A-209ENST00000525854 PSENENQ9NZ42 101 aa8.41□□□□□ -1.06
HIF3A-209ENST00000525854 ELOA3CA0A087WX78 387 aaPredicted RBP8.4□□□□□ -1.06
HIF3A-209ENST00000525854 TRAV10A0A0B4J240 114 aa8.4□□□□□ -1.06
HIF3A-209ENST00000525854 SMCO3A2RU48 225 aa8.4□□□□□ -1.06
HIF3A-209ENST00000525854 SMIM9A6NGZ8 99 aa8.4□□□□□ -1.06
HIF3A-209ENST00000525854 ZNF98A6NK75 572 aa8.4□□□□□ -1.06
HIF3A-209ENST00000525854 SSSCA1O60232 199 aa8.4□□□□□ -1.06
HIF3A-209ENST00000525854 IGKV3-20P01619 116 aa8.4□□□□□ -1.06
HIF3A-209ENST00000525854 IL7P13232 177 aa8.4□□□□□ -1.06
HIF3A-209ENST00000525854 ANXA7P20073 488 aaKnown RBP8.4□□□□□ -1.06
HIF3A-209ENST00000525854 GDF5OSQ5U4N7 250 aa8.4□□□□□ -1.06
HIF3A-209ENST00000525854 S100A7AQ86SG5 101 aa8.4□□□□□ -1.06
HIF3A-209ENST00000525854 OR1B1Q8NGR6 318 aa8.4□□□□□ -1.06
HIF3A-209ENST00000525854 C16orf92Q96LL3 132 aa8.4□□□□□ -1.06
HIF3A-209ENST00000525854 NEU1Q99519 415 aa8.4□□□□□ -1.06
HIF3A-209ENST00000525854 RSG1Q9BU20 258 aa8.4□□□□□ -1.06
HIF3A-209ENST00000525854 SLC25A22Q9H936 323 aa8.4□□□□□ -1.06
HIF3A-209ENST00000525854 RPRMQ9NS64 109 aa8.4□□□□□ -1.06
HIF3A-209ENST00000525854 TMEM189A5PLL7 270 aa8.39□□□□□ -1.07
HIF3A-209ENST00000525854 IL5P05113 134 aa8.39□□□□□ -1.07
HIF3A-209ENST00000525854 GATA2P23769 480 aaPredicted RBP8.39□□□□□ -1.07
HIF3A-209ENST00000525854 BTCP35070 178 aa8.39□□□□□ -1.07
HIF3A-209ENST00000525854 PAX9P55771 341 aa8.39□□□□□ -1.07
HIF3A-209ENST00000525854 SELENOTP62341 195 aa8.39□□□□□ -1.07
HIF3A-209ENST00000525854 PSG9Q00887 426 aa8.39□□□□□ -1.07
HIF3A-209ENST00000525854 IAH1Q2TAA2 248 aaPredicted RBP8.39□□□□□ -1.07
HIF3A-209ENST00000525854 ZNF705AQ6ZN79 300 aaPredicted RBP8.39□□□□□ -1.07
HIF3A-209ENST00000525854 CYP2G1PQ6ZSU1 146 aa8.39□□□□□ -1.07
HIF3A-209ENST00000525854 Q6ZTC4 211 aa8.39□□□□□ -1.07
HIF3A-209ENST00000525854 RPP25LQ8N5L8 163 aaKnown RBP8.39□□□□□ -1.07
HIF3A-209ENST00000525854 OR4B1Q8NGF8 309 aa8.39□□□□□ -1.07
HIF3A-209ENST00000525854 MITD1Q8WV92 249 aa8.39□□□□□ -1.07
HIF3A-209ENST00000525854 SLC25A32Q9H2D1 315 aa8.39□□□□□ -1.07
HIF3A-209ENST00000525854 ZNF705FA8MVS1 300 aaPredicted RBP8.38□□□□□ -1.07
HIF3A-209ENST00000525854 FNDC10F2Z333 226 aa8.38□□□□□ -1.07
HIF3A-209ENST00000525854 TSC22D2O75157 780 aa8.38□□□□□ -1.07
HIF3A-209ENST00000525854 HYPMO75409 117 aa8.38□□□□□ -1.07
HIF3A-209ENST00000525854 DEDDO75618 318 aa8.38□□□□□ -1.07
HIF3A-209ENST00000525854 ZNF705DP0CH99 300 aaPredicted RBP8.38□□□□□ -1.07
HIF3A-209ENST00000525854 ZNF705BP0CI00 300 aaPredicted RBP8.38□□□□□ -1.07
HIF3A-209ENST00000525854 TAS2R30P59541 319 aa8.38□□□□□ -1.07
HIF3A-209ENST00000525854 DEFB1P60022 68 aa8.38□□□□□ -1.07
HIF3A-209ENST00000525854 RAP2BP61225 183 aa8.38□□□□□ -1.07
HIF3A-209ENST00000525854 DLK1P80370 383 aa8.38□□□□□ -1.07
HIF3A-209ENST00000525854 ZNF846Q147U1 533 aa8.38□□□□□ -1.07
HIF3A-209ENST00000525854 FAM78BQ5VT40 261 aa8.38□□□□□ -1.07
HIF3A-209ENST00000525854 TMEM14EPQ6UXP3 125 aa8.38□□□□□ -1.07
HIF3A-209ENST00000525854 TMEM182Q6ZP80 229 aaPredicted RBP8.38□□□□□ -1.07
HIF3A-209ENST00000525854 OR10P1Q8NGE3 313 aa8.38□□□□□ -1.07
HIF3A-209ENST00000525854 GSKIPQ9P0R6 139 aa8.38□□□□□ -1.07
HIF3A-209ENST00000525854 MGAT4CQ9UBM8 478 aa8.38□□□□□ -1.07
HIF3A-209ENST00000525854 APLNQ9ULZ1 77 aa8.38□□□□□ -1.07
HIF3A-209ENST00000525854 RNF24Q9Y225 148 aa8.38□□□□□ -1.07
HIF3A-209ENST00000525854 HIGD1AQ9Y241 93 aa8.38□□□□□ -1.07
HIF3A-209ENST00000525854 GOLT1BQ9Y3E0 138 aa8.38□□□□□ -1.07
HIF3A-209ENST00000525854 IGHV3OR16-12A0A075B7B8 117 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 DEFB131BA0A096LNP1 70 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 A0A0J9YX75 114 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 TEX48A0A1B0GUV7 120 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 PMS2P5A8MQ11 134 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms