RNA–Protein interactions for RNA: ENST00000525617.2

LRRK1-204, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-204ENST00000525617 FAM24BQ8N5W8 94 aa10.64□□□□□ -0.71
LRRK1-204ENST00000525617 CSTL1Q9H114 145 aa10.64□□□□□ -0.71
LRRK1-204ENST00000525617 SLC45A2Q9UMX9 530 aa10.64□□□□□ -0.71
LRRK1-204ENST00000525617 TP53TG1Q9Y2A0 90 aa10.64□□□□□ -0.71
LRRK1-204ENST00000525617 SPRY2O43597 315 aa10.63□□□□□ -0.71
LRRK1-204ENST00000525617 LYL1P12980 280 aa10.63□□□□□ -0.71
LRRK1-204ENST00000525617 ORM2P19652 201 aa10.63□□□□□ -0.71
LRRK1-204ENST00000525617 GATA2P23769 480 aaPredicted RBP10.63□□□□□ -0.71
LRRK1-204ENST00000525617 DEFB135Q30KP9 77 aa10.63□□□□□ -0.71
LRRK1-204ENST00000525617 TEPPQ6URK8 271 aa10.63□□□□□ -0.71
LRRK1-204ENST00000525617 OR8I2Q8N0Y5 310 aa10.63□□□□□ -0.71
LRRK1-204ENST00000525617 OVOL2Q9BRP0 275 aa10.63□□□□□ -0.71
LRRK1-204ENST00000525617 MARVELD1Q9BSK0 173 aa10.63□□□□□ -0.71
LRRK1-204ENST00000525617 TMEM147Q9BVK8 224 aa10.63□□□□□ -0.71
LRRK1-204ENST00000525617 GGACTQ9BVM4 153 aa10.63□□□□□ -0.71
LRRK1-204ENST00000525617 DEDDO75618 318 aa10.62□□□□□ -0.71
LRRK1-204ENST00000525617 RAP2BP61225 183 aa10.62□□□□□ -0.71
LRRK1-204ENST00000525617 RAB32Q13637 225 aa10.62□□□□□ -0.71
LRRK1-204ENST00000525617 PSMG4Q5JS54 123 aa10.62□□□□□ -0.71
LRRK1-204ENST00000525617 S100A7AQ86SG5 101 aa10.62□□□□□ -0.71
LRRK1-204ENST00000525617 OR1B1Q8NGR6 318 aa10.62□□□□□ -0.71
LRRK1-204ENST00000525617 SEPSECSQ9HD40 501 aaKnown RBP10.62□□□□□ -0.71
LRRK1-204ENST00000525617 GOSR2O14653 212 aa10.61□□□□□ -0.71
LRRK1-204ENST00000525617 RLN2P04090 185 aa10.61□□□□□ -0.71
LRRK1-204ENST00000525617 ID1P41134 155 aa10.61□□□□□ -0.71
LRRK1-204ENST00000525617 CYCSP99999 105 aaKnown RBP10.61□□□□□ -0.71
LRRK1-204ENST00000525617 IL15RAQ13261 267 aa10.61□□□□□ -0.71
LRRK1-204ENST00000525617 TMEM182Q6ZP80 229 aaPredicted RBP10.61□□□□□ -0.71
LRRK1-204ENST00000525617 IL17DQ8TAD2 202 aa10.61□□□□□ -0.71
LRRK1-204ENST00000525617 RNF183Q96D59 192 aa10.61□□□□□ -0.71
LRRK1-204ENST00000525617 SLC25A22Q9H936 323 aa10.61□□□□□ -0.71
LRRK1-204ENST00000525617 FAM24AA6NFZ4 105 aa10.6□□□□□ -0.71
LRRK1-204ENST00000525617 ZNF98A6NK75 572 aa10.6□□□□□ -0.71
LRRK1-204ENST00000525617 LINC00869P0C866 280 aa10.6□□□□□ -0.71
LRRK1-204ENST00000525617 GALR1P47211 349 aa10.6□□□□□ -0.71
LRRK1-204ENST00000525617 SLC38A11Q08AI6 406 aa10.6□□□□□ -0.71
LRRK1-204ENST00000525617 ARL16Q0P5N6 197 aa10.6□□□□□ -0.71
LRRK1-204ENST00000525617 RAB31Q13636 194 aa10.6□□□□□ -0.71
LRRK1-204ENST00000525617 SAMD13Q5VXD3 122 aa10.6□□□□□ -0.71
LRRK1-204ENST00000525617 STX12Q86Y82 276 aa10.6□□□□□ -0.71
LRRK1-204ENST00000525617 GPR82Q96P67 336 aa10.6□□□□□ -0.71
LRRK1-204ENST00000525617 C11orf1Q9H5F2 150 aa10.6□□□□□ -0.71
LRRK1-204ENST00000525617 LYRM2Q9NU23 88 aaPredicted RBP10.6□□□□□ -0.71
LRRK1-204ENST00000525617 DOK5Q9P104 306 aa10.6□□□□□ -0.71
LRRK1-204ENST00000525617 STAB2Q8WWQ8 2551 aa10.6□□□□□ -0.71
LRRK1-204ENST00000525617 KNCNA6PVL3 124 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 SSNA1O43805 119 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 HYPMO75409 117 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 CST7O76096 145 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 SIX6O95475 246 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 CA1P00915 261 aaPredicted RBP10.59□□□□□ -0.71
LRRK1-204ENST00000525617 OR5G3P0C626 314 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 MEOX2P50222 304 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 SULT1A1P50225 295 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 HBG1P69891 147 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 HBG2P69892 147 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 ACTL10Q5JWF8 245 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 CASC10Q5T4H9 136 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 PXDC1Q5TGL8 231 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 MORN3Q6PF18 240 aaPredicted RBP10.59□□□□□ -0.71
LRRK1-204ENST00000525617 ZNF546Q86UE3 836 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 TMEM217Q8N7C4 229 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 GATAD1Q8WUU5 269 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 NMES1Q9C002 83 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 RNF24Q9Y225 148 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 HIGD1AQ9Y241 93 aa10.59□□□□□ -0.71
LRRK1-204ENST00000525617 TENM3Q9P273 2699 aa10.58□□□□□ -0.72
LRRK1-204ENST00000525617 AGPAT2O15120 278 aa10.58□□□□□ -0.72
LRRK1-204ENST00000525617 SPP1P10451 314 aa10.58□□□□□ -0.72
LRRK1-204ENST00000525617 S100A11P31949 105 aa10.58□□□□□ -0.72
LRRK1-204ENST00000525617 PSMB3P49720 205 aa10.58□□□□□ -0.72
LRRK1-204ENST00000525617 PLP1P60201 277 aa10.58□□□□□ -0.72
LRRK1-204ENST00000525617 TMEM41BQ5BJD5 291 aa10.58□□□□□ -0.72
LRRK1-204ENST00000525617 TRPT1Q86TN4 253 aaKnown RBP10.58□□□□□ -0.72
LRRK1-204ENST00000525617 TMEM252Q8N6L7 170 aa10.58□□□□□ -0.72
LRRK1-204ENST00000525617 SLC25A39Q9BZJ4 359 aaPredicted RBP10.58□□□□□ -0.72
LRRK1-204ENST00000525617 ARL6Q9H0F7 186 aa10.58□□□□□ -0.72
LRRK1-204ENST00000525617 UQCC1Q9NVA1 299 aa10.58□□□□□ -0.72
LRRK1-204ENST00000525617 DNAH9Q9NYC9 4486 aa10.57□□□□□ -0.72
LRRK1-204ENST00000525617 H3BRN7 92 aa10.57□□□□□ -0.72
LRRK1-204ENST00000525617 NUTF2P61970 127 aaKnown RBP10.57□□□□□ -0.72
LRRK1-204ENST00000525617 ATP6V1FQ16864 119 aa10.57□□□□□ -0.72
LRRK1-204ENST00000525617 LRRC37A5PQ49AS3 106 aa10.57□□□□□ -0.72
LRRK1-204ENST00000525617 ZFAND6Q6FIF0 208 aa10.57□□□□□ -0.72
LRRK1-204ENST00000525617 LINC00052Q96N35 136 aa10.57□□□□□ -0.72
LRRK1-204ENST00000525617 RARRES2Q99969 163 aa10.57□□□□□ -0.72
LRRK1-204ENST00000525617 SHANK2-AS3Q9BTD1 123 aa10.57□□□□□ -0.72
LRRK1-204ENST00000525617 SLC25A32Q9H2D1 315 aa10.57□□□□□ -0.72
LRRK1-204ENST00000525617 E5RGE8 158 aa10.56□□□□□ -0.72
LRRK1-204ENST00000525617 ISLRO14498 428 aa10.56□□□□□ -0.72
LRRK1-204ENST00000525617 RPL7P18124 248 aaKnown RBP10.56□□□□□ -0.72
LRRK1-204ENST00000525617 CAMLGP49069 296 aa10.56□□□□□ -0.72
LRRK1-204ENST00000525617 C16orf92Q96LL3 132 aa10.56□□□□□ -0.72
LRRK1-204ENST00000525617 RSG1Q9BU20 258 aa10.56□□□□□ -0.72
LRRK1-204ENST00000525617 SCRT1Q9BWW7 348 aa10.56□□□□□ -0.72
LRRK1-204ENST00000525617 SLC25A31Q9H0C2 315 aa10.56□□□□□ -0.72
LRRK1-204ENST00000525617 ARV1Q9H2C2 271 aa10.56□□□□□ -0.72
LRRK1-204ENST00000525617 A0A0J9YWU9 116 aa10.55□□□□□ -0.72
LRRK1-204ENST00000525617 IGSF23A1L1A6 192 aa10.55□□□□□ -0.72
LRRK1-204ENST00000525617 PTTG1O95997 202 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms