RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 CTF1Q16619 201 aa16.96■□□□□ 0.31
USP47-205ENST00000525257 RRN3P1Q2M238 152 aa16.96■□□□□ 0.31
USP47-205ENST00000525257 C1orf194Q5T5A4 169 aa16.96■□□□□ 0.31
USP47-205ENST00000525257 IL22RA2Q969J5 263 aa16.96■□□□□ 0.31
USP47-205ENST00000525257 PPP1R14BQ96C90 147 aa16.96■□□□□ 0.31
USP47-205ENST00000525257 SLC35E1Q96K37 410 aa16.96■□□□□ 0.31
USP47-205ENST00000525257 A0A0J9YX75 114 aa16.95■□□□□ 0.3
USP47-205ENST00000525257 ISLRO14498 428 aa16.95■□□□□ 0.3
USP47-205ENST00000525257 AKAIN1P0CW23 69 aa16.95■□□□□ 0.3
USP47-205ENST00000525257 OR2F1Q13607 317 aa16.95■□□□□ 0.3
USP47-205ENST00000525257 RGS5O15539 181 aa16.94■□□□□ 0.3
USP47-205ENST00000525257 CCR6P51684 374 aa16.94■□□□□ 0.3
USP47-205ENST00000525257 MRPS10P82664 201 aaKnown RBP16.94■□□□□ 0.3
USP47-205ENST00000525257 SMCO1Q147U7 214 aa16.94■□□□□ 0.3
USP47-205ENST00000525257 OR8I2Q8N0Y5 310 aa16.94■□□□□ 0.3
USP47-205ENST00000525257 OR51S1Q8NGJ8 323 aa16.94■□□□□ 0.3
USP47-205ENST00000525257 SMIM4Q8WVI0 70 aa16.94■□□□□ 0.3
USP47-205ENST00000525257 MAGT1Q9H0U3 335 aa16.94■□□□□ 0.3
USP47-205ENST00000525257 KCNIP3Q9Y2W7 256 aa16.94■□□□□ 0.3
USP47-205ENST00000525257 FABP1P07148 127 aa16.93■□□□□ 0.3
USP47-205ENST00000525257 GPX4P36969 197 aaPredicted RBP16.93■□□□□ 0.3
USP47-205ENST00000525257 LYZL2Q7Z4W2 148 aa16.93■□□□□ 0.3
USP47-205ENST00000525257 C20orf173Q96LM9 149 aa16.93■□□□□ 0.3
USP47-205ENST00000525257 PRRT1Q99946 306 aa16.93■□□□□ 0.3
USP47-205ENST00000525257 TMEM208Q9BTX3 173 aa16.93■□□□□ 0.3
USP47-205ENST00000525257 RPRMQ9NS64 109 aa16.93■□□□□ 0.3
USP47-205ENST00000525257 TMED3Q9Y3Q3 217 aa16.93■□□□□ 0.3
USP47-205ENST00000525257 LRP1BQ9NZR2 4599 aa16.92■□□□□ 0.3
USP47-205ENST00000525257 SNRPGP15A8MWD9 76 aa16.92■□□□□ 0.3
USP47-205ENST00000525257 CLVS1Q8IUQ0 354 aaPredicted RBP16.92■□□□□ 0.3
USP47-205ENST00000525257 C16orf92Q96LL3 132 aa16.92■□□□□ 0.3
USP47-205ENST00000525257 A0A0B4J2A0 478 aa16.91■□□□□ 0.3
USP47-205ENST00000525257 DOK5Q9P104 306 aa16.91■□□□□ 0.3
USP47-205ENST00000525257 SHPKQ9UHJ6 478 aa16.91■□□□□ 0.3
USP47-205ENST00000525257 CTDSP2O14595 271 aa16.9■□□□□ 0.3
USP47-205ENST00000525257 C15orf53Q8NAA6 179 aa16.9■□□□□ 0.3
USP47-205ENST00000525257 OR1S1Q8NH92 325 aa16.9■□□□□ 0.3
USP47-205ENST00000525257 IGF2BP2-AS1Q96M15 143 aa16.9■□□□□ 0.3
USP47-205ENST00000525257 ATG101Q9BSB4 218 aa16.9■□□□□ 0.3
USP47-205ENST00000525257 AKR1C4P17516 323 aa16.89■□□□□ 0.29
USP47-205ENST00000525257 MEOX2P50222 304 aa16.89■□□□□ 0.29
USP47-205ENST00000525257 ATP5IP56385 69 aaPredicted RBP16.89■□□□□ 0.29
USP47-205ENST00000525257 TNP2Q05952 138 aa16.89■□□□□ 0.29
USP47-205ENST00000525257 SAMD13Q5VXD3 122 aa16.89■□□□□ 0.29
USP47-205ENST00000525257 AMTNQ6UX39 209 aa16.89■□□□□ 0.29
USP47-205ENST00000525257 TRGV9Q99603 122 aa16.89■□□□□ 0.29
USP47-205ENST00000525257 SLC25A32Q9H2D1 315 aa16.89■□□□□ 0.29
USP47-205ENST00000525257 SLC25A22Q9H936 323 aa16.89■□□□□ 0.29
USP47-205ENST00000525257 PRM2P04554 102 aa16.88■□□□□ 0.29
USP47-205ENST00000525257 GALR1P47211 349 aa16.88■□□□□ 0.29
USP47-205ENST00000525257 FAM3BP58499 235 aaPredicted RBP16.88■□□□□ 0.29
USP47-205ENST00000525257 IL18Q14116 193 aa16.88■□□□□ 0.29
USP47-205ENST00000525257 PAIP2BQ9ULR5 123 aaKnown RBP16.88■□□□□ 0.29
USP47-205ENST00000525257 IGKV1OR2-108A0A075B7D4 117 aa16.87■□□□□ 0.29
USP47-205ENST00000525257 A8MTW9 85 aa16.87■□□□□ 0.29
USP47-205ENST00000525257 ZNF705GA8MUZ8 300 aaPredicted RBP16.87■□□□□ 0.29
USP47-205ENST00000525257 C16orf90A8MZG2 172 aa16.87■□□□□ 0.29
USP47-205ENST00000525257 IAPPP10997 89 aa16.87■□□□□ 0.29
USP47-205ENST00000525257 RSG1Q9BU20 258 aa16.87■□□□□ 0.29
USP47-205ENST00000525257 M0R2Z0 102 aa16.86■□□□□ 0.29
USP47-205ENST00000525257 RAB11AP62491 216 aa16.86■□□□□ 0.29
USP47-205ENST00000525257 SPINK13Q1W4C9 94 aa16.86■□□□□ 0.29
USP47-205ENST00000525257 THAP8Q8NA92 274 aa16.86■□□□□ 0.29
USP47-205ENST00000525257 C17orf77Q96MU5 243 aa16.86■□□□□ 0.29
USP47-205ENST00000525257 SCGB3A2Q96PL1 93 aa16.86■□□□□ 0.29
USP47-205ENST00000525257 SCP2D1Q9UJQ7 156 aa16.86■□□□□ 0.29
USP47-205ENST00000525257 ANKRD20A5PA0PJZ0 165 aa16.85■□□□□ 0.29
USP47-205ENST00000525257 CTDSPLO15194 276 aa16.85■□□□□ 0.29
USP47-205ENST00000525257 DEFB130BP0DP73 79 aa16.85■□□□□ 0.29
USP47-205ENST00000525257 DEFB130AP0DP74 79 aa16.85■□□□□ 0.29
USP47-205ENST00000525257 ALDH3B2P48448 385 aa16.85■□□□□ 0.29
USP47-205ENST00000525257 DIRAS2Q96HU8 199 aa16.85■□□□□ 0.29
USP47-205ENST00000525257 MCUBQ9NWR8 336 aa16.85■□□□□ 0.29
USP47-205ENST00000525257 ZNF98A6NK75 572 aa16.84■□□□□ 0.29
USP47-205ENST00000525257 LYRM9A8MSI8 78 aa16.84■□□□□ 0.29
USP47-205ENST00000525257 INSP01308 110 aa16.84■□□□□ 0.29
USP47-205ENST00000525257 SMIM18P0DKX4 95 aa16.84■□□□□ 0.29
USP47-205ENST00000525257 ANXA3P12429 323 aa16.84■□□□□ 0.29
USP47-205ENST00000525257 CNN1P51911 297 aaKnown RBP16.84■□□□□ 0.29
USP47-205ENST00000525257 SRPXP78539 464 aa16.84■□□□□ 0.29
USP47-205ENST00000525257 IGFL4Q6B9Z1 124 aa16.84■□□□□ 0.29
USP47-205ENST00000525257 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.84■□□□□ 0.29
USP47-205ENST00000525257 OR11H7Q8NGC8 314 aa16.84■□□□□ 0.29
USP47-205ENST00000525257 NBDYA0A0U1RRE5 68 aa16.83■□□□□ 0.28
USP47-205ENST00000525257 CRXO43186 299 aaPredicted RBP16.83■□□□□ 0.28
USP47-205ENST00000525257 SPCS2Q15005 226 aa16.83■□□□□ 0.28
USP47-205ENST00000525257 GGNBP1Q5YKI7 109 aa16.83■□□□□ 0.28
USP47-205ENST00000525257 F5H768 121 aa16.82■□□□□ 0.28
USP47-205ENST00000525257 NUDT3O95989 172 aa16.82■□□□□ 0.28
USP47-205ENST00000525257 CFDP00746 253 aaPredicted RBP16.82■□□□□ 0.28
USP47-205ENST00000525257 ORM2P19652 201 aa16.82■□□□□ 0.28
USP47-205ENST00000525257 GATA2P23769 480 aaPredicted RBP16.82■□□□□ 0.28
USP47-205ENST00000525257 BAP18Q8IXM2 172 aa16.82■□□□□ 0.28
USP47-205ENST00000525257 C6orf223Q8N319 242 aa16.82■□□□□ 0.28
USP47-205ENST00000525257 ZNRF2Q8NHG8 242 aa16.82■□□□□ 0.28
USP47-205ENST00000525257 SLC45A2Q9UMX9 530 aa16.82■□□□□ 0.28
USP47-205ENST00000525257 APOBP04114 4563 aaKnown RBP16.81■□□□□ 0.28
USP47-205ENST00000525257 PITX3O75364 302 aa16.81■□□□□ 0.28
USP47-205ENST00000525257 CDK2AP2O75956 126 aa16.81■□□□□ 0.28
USP47-205ENST00000525257 DUSP14O95147 198 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms