RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 KLK9Q2XQG4 91 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 DEFB136Q30KP8 78 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 HIGD2BQ4VC39 106 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 AKIRIN2Q53H80 203 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 Q5BKY6 102 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 PVRIGQ6DKI7 326 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 PLET1Q6UQ28 207 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 H2BFWTQ7Z2G1 175 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 LGI3Q8N145 548 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 C12orf45Q8N5I9 185 aaPredicted RBP2.2□□□□□ -2.06
CSDE1-208ENST00000524652 TTC9CQ8N5M4 171 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 ZNF491Q8N8L2 437 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 UXS1Q8NBZ7 420 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 OR5AU1Q8NGC0 362 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 OR5M8Q8NGP6 311 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 OR4F5Q8NH21 305 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 COQ8AQ8NI60 647 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 VSTM2AQ8TAG5 236 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 GATAD1Q8WUU5 269 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 MS4A10Q96PG2 267 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 SCGB3A2Q96PL1 93 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 P2RX4Q99571 388 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 PHB2Q99623 299 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 HINT2Q9BX68 163 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 MAGT1Q9H0U3 335 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 RBKSQ9H477 322 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 FNDC4Q9H6D8 234 aaPredicted RBP2.2□□□□□ -2.06
CSDE1-208ENST00000524652 COA4Q9NYJ1 87 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 KLK9Q9UKQ9 250 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 RCL1Q9Y2P8 373 aaKnown RBP2.2□□□□□ -2.06
CSDE1-208ENST00000524652 KCNIP3Q9Y2W7 256 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 TMED3Q9Y3Q3 217 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 DNAH1Q9P2D7 4330 aa2.2□□□□□ -2.06
CSDE1-208ENST00000524652 C13orf42A0A1B0GVH6 325 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 SNRPGP15A8MWD9 76 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 PPP5D1E7EU14 171 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 INS-IGF2F8WCM5 200 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 H3BP45 60 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 SMLR1H3BR10 107 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 I3L2K1 104 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 K7EIM0 57 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 K7EPK0 472 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 WRBO00258 174 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 SYNGR2O43760 224 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 SSSCA1O60232 199 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 CREBL2O60519 120 aaPredicted RBP2.19□□□□□ -2.06
CSDE1-208ENST00000524652 PRAF2O60831 178 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 CDK2AP2O75956 126 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 CNIH1O95406 144 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 DHFRP00374 187 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 IFNA17P01571 189 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 IGHV3-11P01762 117 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 TRGV3P03979 118 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 OR13C7P0DN81 318 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 VPREB1P12018 145 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 SLC25A6P12236 298 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 PSMB6P28072 239 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 S100GP29377 79 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 ARL3P36405 182 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 SPCS3P61009 180 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 RRAS2P62070 204 aaPredicted RBP2.19□□□□□ -2.06
CSDE1-208ENST00000524652 POLR2GP62487 172 aaKnown RBP eCLIP2.19□□□□□ -2.06
CSDE1-208ENST00000524652 RPL23AP62750 156 aaKnown RBP2.19□□□□□ -2.06
CSDE1-208ENST00000524652 SRPXP78539 464 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 RHOGP84095 191 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 CD300CQ08708 224 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 IAH1Q2TAA2 248 aaPredicted RBP2.19□□□□□ -2.06
CSDE1-208ENST00000524652 C15orf32Q32M92 178 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 NSUN5P1Q3KNT7 163 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 CENPVQ7Z7K6 275 aaPredicted RBP2.19□□□□□ -2.06
CSDE1-208ENST00000524652 OR1L8Q8NGR8 309 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 OR5B3Q8NH48 314 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 OR52E5Q8NH55 327 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 OR4A16Q8NH70 328 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 OR1S1Q8NH92 325 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 RNASE11Q8TAA1 199 aaKnown RBP2.19□□□□□ -2.06
CSDE1-208ENST00000524652 DTD1Q8TEA8 209 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 TMEM158Q8WZ71 300 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 BSCL2Q96G97 398 aaPredicted RBP2.19□□□□□ -2.06
CSDE1-208ENST00000524652 OR5B12Q96R08 314 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 OR4C12Q96R67 309 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 SPIN2AQ99865 258 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 SPIN2BQ9BPZ2 258 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 RNF126Q9BV68 326 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 COMMD5Q9GZQ3 224 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 ZC4H2Q9NQZ6 224 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.19□□□□□ -2.06
CSDE1-208ENST00000524652 OR5AC2Q9NZP5 309 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 PRNDQ9UKY0 176 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 ZNF257Q9Y2Q1 563 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 F11RQ9Y624 299 aaKnown RBP2.19□□□□□ -2.06
CSDE1-208ENST00000524652 VPS13DQ5THJ4 4388 aa2.19□□□□□ -2.06
CSDE1-208ENST00000524652 IGKV1D-37A0A075B6S9 117 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 IGKV1OR2-108A0A075B7D4 117 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 A0A1B0GUS0 222 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 TCRBV4S1A1TA0A5B7 111 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 IGSF23A1L1A6 192 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 C5orf51A6NDU8 294 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 FAM24AA6NFZ4 105 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 CEBPZOSA8MTT3 80 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms