RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, human

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO28-205	ENST00000523990	SNRPD3	P62318	126 aa	Known RBP	14	□□□□□ -0.17
FBXO28-205	ENST00000523990	C1orf194	Q5T5A4	169 aa		14	□□□□□ -0.17
FBXO28-205	ENST00000523990	FBXL17	Q9UF56	701 aa		14	□□□□□ -0.17
FBXO28-205	ENST00000523990	HYDIN	Q4G0P3	5121 aa		14	□□□□□ -0.17
FBXO28-205	ENST00000523990	SMCO3	A2RU48	225 aa		13.99	□□□□□ -0.17
FBXO28-205	ENST00000523990	C7orf66	A4D0T2	115 aa		13.99	□□□□□ -0.17
FBXO28-205	ENST00000523990	UPK1B	O75841	260 aa		13.99	□□□□□ -0.17
FBXO28-205	ENST00000523990	ZNF846	Q147U1	533 aa		13.99	□□□□□ -0.17
FBXO28-205	ENST00000523990	ACTL10	Q5JWF8	245 aa		13.99	□□□□□ -0.17
FBXO28-205	ENST00000523990	BPIFC	Q8NFQ6	507 aa		13.99	□□□□□ -0.17
FBXO28-205	ENST00000523990	SLC45A2	Q9UMX9	530 aa		13.99	□□□□□ -0.17
FBXO28-205	ENST00000523990	GIG44	P09565	113 aa	Predicted RBP	13.98	□□□□□ -0.17
FBXO28-205	ENST00000523990	SPP1	P10451	314 aa		13.98	□□□□□ -0.17
FBXO28-205	ENST00000523990	RRAS2	P62070	204 aa	Predicted RBP	13.98	□□□□□ -0.17
FBXO28-205	ENST00000523990	DLK1	P80370	383 aa		13.98	□□□□□ -0.17
FBXO28-205	ENST00000523990	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.98	□□□□□ -0.17
FBXO28-205	ENST00000523990	PPP1R14B	Q96C90	147 aa		13.98	□□□□□ -0.17
FBXO28-205	ENST00000523990	RARRES2	Q99969	163 aa		13.98	□□□□□ -0.17
FBXO28-205	ENST00000523990	LCE6A	A0A183	80 aa		13.98	□□□□□ -0.17
FBXO28-205	ENST00000523990	FAM25E	A8MYX2	175 aa		13.98	□□□□□ -0.17
FBXO28-205	ENST00000523990	FNDC10	F2Z333	226 aa		13.98	□□□□□ -0.17
FBXO28-205	ENST00000523990	ATF4	P18848	351 aa	Predicted RBP	13.98	□□□□□ -0.17
FBXO28-205	ENST00000523990	C4BPB	P20851	252 aa		13.98	□□□□□ -0.17
FBXO28-205	ENST00000523990	MORN3	Q6PF18	240 aa	Predicted RBP	13.98	□□□□□ -0.17
FBXO28-205	ENST00000523990	CYP2G1P	Q6ZSU1	146 aa		13.98	□□□□□ -0.17
FBXO28-205	ENST00000523990		K7EPK0	472 aa		13.97	□□□□□ -0.17
FBXO28-205	ENST00000523990	SOCS3	O14543	225 aa		13.97	□□□□□ -0.17
FBXO28-205	ENST00000523990	ORM2	P19652	201 aa		13.97	□□□□□ -0.17
FBXO28-205	ENST00000523990	IFITM3	Q01628	133 aa		13.97	□□□□□ -0.17
FBXO28-205	ENST00000523990	OR8I2	Q8N0Y5	310 aa		13.97	□□□□□ -0.17
FBXO28-205	ENST00000523990	OR10P1	Q8NGE3	313 aa		13.97	□□□□□ -0.17
FBXO28-205	ENST00000523990	OR11H2	Q8NH07	326 aa		13.97	□□□□□ -0.17
FBXO28-205	ENST00000523990	C5orf51	A6NDU8	294 aa		13.96	□□□□□ -0.18
FBXO28-205	ENST00000523990	ZNF98	A6NK75	572 aa		13.96	□□□□□ -0.18
FBXO28-205	ENST00000523990	ARL16	Q0P5N6	197 aa		13.96	□□□□□ -0.18
FBXO28-205	ENST00000523990	TMEM41B	Q5BJD5	291 aa		13.96	□□□□□ -0.18
FBXO28-205	ENST00000523990	OR1B1	Q8NGR6	318 aa		13.96	□□□□□ -0.18
FBXO28-205	ENST00000523990	ENKUR	Q8TC29	256 aa		13.96	□□□□□ -0.18
FBXO28-205	ENST00000523990	SLC25A32	Q9H2D1	315 aa		13.96	□□□□□ -0.18
FBXO28-205	ENST00000523990	C11orf1	Q9H5F2	150 aa		13.96	□□□□□ -0.18
FBXO28-205	ENST00000523990	NPVF	Q9HCQ7	196 aa		13.96	□□□□□ -0.18
FBXO28-205	ENST00000523990	MGAT4C	Q9UBM8	478 aa		13.96	□□□□□ -0.18
FBXO28-205	ENST00000523990	LSM5	Q9Y4Y9	91 aa	Known RBP	13.96	□□□□□ -0.18
FBXO28-205	ENST00000523990	IL5	P05113	134 aa		13.95	□□□□□ -0.18
FBXO28-205	ENST00000523990	PSMB3	P49720	205 aa		13.95	□□□□□ -0.18
FBXO28-205	ENST00000523990	TMEM217	Q8N7C4	229 aa		13.95	□□□□□ -0.18
FBXO28-205	ENST00000523990	C2orf50	Q96LR7	162 aa		13.95	□□□□□ -0.18
FBXO28-205	ENST00000523990	TMEM147	Q9BVK8	224 aa		13.95	□□□□□ -0.18
FBXO28-205	ENST00000523990	C11orf68	Q9H3H3	251 aa	Known RBP	13.95	□□□□□ -0.18
FBXO28-205	ENST00000523990	SLC25A22	Q9H936	323 aa		13.95	□□□□□ -0.18
FBXO28-205	ENST00000523990		L7N2F9	121 aa		13.94	□□□□□ -0.18
FBXO28-205	ENST00000523990	HLA-DRB4	P13762	266 aa		13.94	□□□□□ -0.18
FBXO28-205	ENST00000523990	SELENOT	P62341	195 aa		13.94	□□□□□ -0.18
FBXO28-205	ENST00000523990	VAMP2	P63027	116 aa		13.94	□□□□□ -0.18
FBXO28-205	ENST00000523990	PMS2P11	Q13670	270 aa		13.94	□□□□□ -0.18
FBXO28-205	ENST00000523990	TEPP	Q6URK8	271 aa		13.94	□□□□□ -0.18
FBXO28-205	ENST00000523990	GSG1L	Q6UXU4	331 aa		13.94	□□□□□ -0.18
FBXO28-205	ENST00000523990	HLA-DRB4	X5D2U9	266 aa		13.94	□□□□□ -0.18
FBXO28-205	ENST00000523990		H3BMM0	161 aa		13.93	□□□□□ -0.18
FBXO28-205	ENST00000523990		H3BRN7	92 aa		13.93	□□□□□ -0.18
FBXO28-205	ENST00000523990	LINC00869	P0C866	280 aa		13.93	□□□□□ -0.18
FBXO28-205	ENST00000523990	GALR1	P47211	349 aa		13.93	□□□□□ -0.18
FBXO28-205	ENST00000523990	PLP1	P60201	277 aa		13.93	□□□□□ -0.18
FBXO28-205	ENST00000523990	SLC38A11	Q08AI6	406 aa		13.93	□□□□□ -0.18
FBXO28-205	ENST00000523990	GDF5OS	Q5U4N7	250 aa		13.93	□□□□□ -0.18
FBXO28-205	ENST00000523990	C17orf77	Q96MU5	243 aa		13.93	□□□□□ -0.18
FBXO28-205	ENST00000523990	GGACT	Q9BVM4	153 aa		13.93	□□□□□ -0.18
FBXO28-205	ENST00000523990	SCRT1	Q9BWW7	348 aa		13.93	□□□□□ -0.18
FBXO28-205	ENST00000523990	DOK5	Q9P104	306 aa		13.93	□□□□□ -0.18
FBXO28-205	ENST00000523990	CXorf65	A6NEN9	183 aa		13.92	□□□□□ -0.18
FBXO28-205	ENST00000523990	ISLR	O14498	428 aa		13.92	□□□□□ -0.18
FBXO28-205	ENST00000523990	S100A7	P31151	101 aa		13.92	□□□□□ -0.18
FBXO28-205	ENST00000523990	ID1	P41134	155 aa		13.92	□□□□□ -0.18
FBXO28-205	ENST00000523990	MEOX2	P50222	304 aa		13.92	□□□□□ -0.18
FBXO28-205	ENST00000523990	DEFB1	P60022	68 aa		13.92	□□□□□ -0.18
FBXO28-205	ENST00000523990	IL15RA	Q13261	267 aa		13.92	□□□□□ -0.18
FBXO28-205	ENST00000523990	NRARP	Q7Z6K4	114 aa		13.92	□□□□□ -0.18
FBXO28-205	ENST00000523990	LINC00052	Q96N35	136 aa		13.92	□□□□□ -0.18
FBXO28-205	ENST00000523990	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.92	□□□□□ -0.18
FBXO28-205	ENST00000523990	DEDD	O75618	318 aa		13.91	□□□□□ -0.18
FBXO28-205	ENST00000523990	SAMD13	Q5VXD3	122 aa		13.91	□□□□□ -0.18
FBXO28-205	ENST00000523990	CSNK1G2-AS1	Q8NCQ2	148 aa		13.91	□□□□□ -0.18
FBXO28-205	ENST00000523990	GPR82	Q96P67	336 aa		13.91	□□□□□ -0.18
FBXO28-205	ENST00000523990	SAV1	Q9H4B6	383 aa	Predicted RBP	13.91	□□□□□ -0.18
FBXO28-205	ENST00000523990	CLEC5A	Q9NY25	188 aa		13.91	□□□□□ -0.18
FBXO28-205	ENST00000523990	HIGD1A	Q9Y241	93 aa		13.91	□□□□□ -0.18
FBXO28-205	ENST00000523990	NUPR2	A6NF83	97 aa		13.9	□□□□□ -0.18
FBXO28-205	ENST00000523990	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.9	□□□□□ -0.18
FBXO28-205	ENST00000523990	HYPM	O75409	117 aa		13.9	□□□□□ -0.18
FBXO28-205	ENST00000523990	BCAP31	P51572	246 aa		13.9	□□□□□ -0.18
FBXO28-205	ENST00000523990	CAV2	P51636	162 aa		13.9	□□□□□ -0.18
FBXO28-205	ENST00000523990	S100A10	P60903	97 aa		13.9	□□□□□ -0.18
FBXO28-205	ENST00000523990	RAP2B	P61225	183 aa		13.9	□□□□□ -0.18
FBXO28-205	ENST00000523990	RAB32	Q13637	225 aa		13.9	□□□□□ -0.18
FBXO28-205	ENST00000523990	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.9	□□□□□ -0.18
FBXO28-205	ENST00000523990	FOXI2	Q6ZQN5	318 aa		13.9	□□□□□ -0.18
FBXO28-205	ENST00000523990		Q8NAQ8	132 aa		13.9	□□□□□ -0.18
FBXO28-205	ENST00000523990	SHANK2-AS3	Q9BTD1	123 aa		13.9	□□□□□ -0.18
FBXO28-205	ENST00000523990	AGPAT2	O15120	278 aa		13.9	□□□□□ -0.19
FBXO28-205	ENST00000523990	PVALB	P20472	110 aa	Predicted RBP	13.9	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms