RNA–Protein interactions for RNA: ENST00000523511.1

LSM1-205, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-205ENST00000523511 MEOX2P50222 304 aa11.98□□□□□ -0.49
LSM1-205ENST00000523511 ACTL10Q5JWF8 245 aa11.98□□□□□ -0.49
LSM1-205ENST00000523511 ACOT7LQ6ZUV0 252 aa11.98□□□□□ -0.49
LSM1-205ENST00000523511 FAM24BQ8N5W8 94 aa11.98□□□□□ -0.49
LSM1-205ENST00000523511 ENKURQ8TC29 256 aa11.98□□□□□ -0.49
LSM1-205ENST00000523511 GPR82Q96P67 336 aa11.98□□□□□ -0.49
LSM1-205ENST00000523511 GGACTQ9BVM4 153 aa11.98□□□□□ -0.49
LSM1-205ENST00000523511 C1QTNF4Q9BXJ3 329 aa11.98□□□□□ -0.49
LSM1-205ENST00000523511 GPN1Q9HCN4 374 aaPredicted RBP11.98□□□□□ -0.49
LSM1-205ENST00000523511 PTTG2Q9NZH5 202 aa11.98□□□□□ -0.49
LSM1-205ENST00000523511 JTBO76095 146 aa11.97□□□□□ -0.49
LSM1-205ENST00000523511 RAP2BP61225 183 aa11.97□□□□□ -0.49
LSM1-205ENST00000523511 DLK1P80370 383 aa11.97□□□□□ -0.49
LSM1-205ENST00000523511 ASAH1Q13510 395 aa11.97□□□□□ -0.49
LSM1-205ENST00000523511 TMEM14EPQ6UXP3 125 aa11.97□□□□□ -0.49
LSM1-205ENST00000523511 GSG1LQ6UXU4 331 aa11.97□□□□□ -0.49
LSM1-205ENST00000523511 OR11H2Q8NH07 326 aa11.97□□□□□ -0.49
LSM1-205ENST00000523511 STAB2Q8WWQ8 2551 aa11.96□□□□□ -0.49
LSM1-205ENST00000523511 IGKV1OR2-108A0A075B7D4 117 aa11.96□□□□□ -0.49
LSM1-205ENST00000523511 CXorf65A6NEN9 183 aa11.96□□□□□ -0.49
LSM1-205ENST00000523511 METTL15P1P0C7V9 234 aa11.96□□□□□ -0.49
LSM1-205ENST00000523511 BCAP31P51572 246 aa11.96□□□□□ -0.49
LSM1-205ENST00000523511 RAB31Q13636 194 aa11.96□□□□□ -0.49
LSM1-205ENST00000523511 TEPPQ6URK8 271 aa11.96□□□□□ -0.49
LSM1-205ENST00000523511 CYP2G1PQ6ZSU1 146 aa11.96□□□□□ -0.49
LSM1-205ENST00000523511 TRPT1Q86TN4 253 aaKnown RBP11.96□□□□□ -0.49
LSM1-205ENST00000523511 OR1B1Q8NGR6 318 aa11.96□□□□□ -0.49
LSM1-205ENST00000523511 C2orf50Q96LR7 162 aa11.96□□□□□ -0.49
LSM1-205ENST00000523511 KNCNA6PVL3 124 aa11.95□□□□□ -0.5
LSM1-205ENST00000523511 HYPMO75409 117 aa11.95□□□□□ -0.5
LSM1-205ENST00000523511 UPK1BO75841 260 aa11.95□□□□□ -0.5
LSM1-205ENST00000523511 MBPP02686 304 aaPredicted RBP11.95□□□□□ -0.5
LSM1-205ENST00000523511 PSMB3P49720 205 aa11.95□□□□□ -0.5
LSM1-205ENST00000523511 PAX9P55771 341 aa11.95□□□□□ -0.5
LSM1-205ENST00000523511 DEFA1P59665 94 aa11.95□□□□□ -0.5
LSM1-205ENST00000523511 DEFA3P59666 94 aa11.95□□□□□ -0.5
LSM1-205ENST00000523511 RRAS2P62070 204 aaPredicted RBP11.95□□□□□ -0.5
LSM1-205ENST00000523511 SPATA31B1PQ5VZV4 182 aa11.95□□□□□ -0.5
LSM1-205ENST00000523511 LINC00052Q96N35 136 aa11.95□□□□□ -0.5
LSM1-205ENST00000523511 SEC22CQ9BRL7 303 aa11.95□□□□□ -0.5
LSM1-205ENST00000523511 MFFQ9GZY8 342 aa11.95□□□□□ -0.5
LSM1-205ENST00000523511 C7orf66A4D0T2 115 aa11.94□□□□□ -0.5
LSM1-205ENST00000523511 NUPR2A6NF83 97 aa11.94□□□□□ -0.5
LSM1-205ENST00000523511 ZNF98A6NK75 572 aa11.94□□□□□ -0.5
LSM1-205ENST00000523511 ISLRO14498 428 aa11.94□□□□□ -0.5
LSM1-205ENST00000523511 GOSR2O14653 212 aa11.94□□□□□ -0.5
LSM1-205ENST00000523511 DEDDO75618 318 aa11.94□□□□□ -0.5
LSM1-205ENST00000523511 PXDC1Q5TGL8 231 aa11.94□□□□□ -0.5
LSM1-205ENST00000523511 EBLN2Q6P2I7 272 aa11.94□□□□□ -0.5
LSM1-205ENST00000523511 C16orf92Q96LL3 132 aa11.94□□□□□ -0.5
LSM1-205ENST00000523511 SLC25A22Q9H936 323 aa11.94□□□□□ -0.5
LSM1-205ENST00000523511 KLK5Q9Y337 293 aaPredicted RBP11.94□□□□□ -0.5
LSM1-205ENST00000523511 LSM5Q9Y4Y9 91 aaKnown RBP11.94□□□□□ -0.5
LSM1-205ENST00000523511 NBEAL2Q6ZNJ1 2754 aa11.93□□□□□ -0.5
LSM1-205ENST00000523511 PMS2P5A8MQ11 134 aa11.93□□□□□ -0.5
LSM1-205ENST00000523511 CCSO14618 274 aa11.93□□□□□ -0.5
LSM1-205ENST00000523511 RLN2P04090 185 aa11.93□□□□□ -0.5
LSM1-205ENST00000523511 CAV2P51636 162 aa11.93□□□□□ -0.5
LSM1-205ENST00000523511 RPRMQ9NS64 109 aa11.93□□□□□ -0.5
LSM1-205ENST00000523511 HIGD1AQ9Y241 93 aa11.93□□□□□ -0.5
LSM1-205ENST00000523511 RCL1Q9Y2P8 373 aaKnown RBP11.93□□□□□ -0.5
LSM1-205ENST00000523511 LCE6AA0A183 80 aa11.92□□□□□ -0.5
LSM1-205ENST00000523511 PRAF2O60831 178 aa11.92□□□□□ -0.5
LSM1-205ENST00000523511 OR5G3P0C626 314 aa11.92□□□□□ -0.5
LSM1-205ENST00000523511 RPL7P18124 248 aaKnown RBP11.92□□□□□ -0.5
LSM1-205ENST00000523511 ZNF546Q86UE3 836 aa11.92□□□□□ -0.5
LSM1-205ENST00000523511 RSG1Q9BU20 258 aa11.92□□□□□ -0.5
LSM1-205ENST00000523511 C11orf68Q9H3H3 251 aaKnown RBP11.92□□□□□ -0.5
LSM1-205ENST00000523511 TBC1D24Q9ULP9 559 aa11.92□□□□□ -0.5
LSM1-205ENST00000523511 H3BMM0 161 aa11.91□□□□□ -0.5
LSM1-205ENST00000523511 K7EPK0 472 aa11.91□□□□□ -0.5
LSM1-205ENST00000523511 LINC00869P0C866 280 aa11.91□□□□□ -0.5
LSM1-205ENST00000523511 HLA-DRB4P13762 266 aa11.91□□□□□ -0.5
LSM1-205ENST00000523511 MIFP14174 115 aa11.91□□□□□ -0.5
LSM1-205ENST00000523511 GATA2P23769 480 aaPredicted RBP11.91□□□□□ -0.5
LSM1-205ENST00000523511 S100A11P31949 105 aa11.91□□□□□ -0.5
LSM1-205ENST00000523511 PLP1P60201 277 aa11.91□□□□□ -0.5
LSM1-205ENST00000523511 S100A10P60903 97 aa11.91□□□□□ -0.5
LSM1-205ENST00000523511 HBG1P69891 147 aa11.91□□□□□ -0.5
LSM1-205ENST00000523511 HBG2P69892 147 aa11.91□□□□□ -0.5
LSM1-205ENST00000523511 CYCSP99999 105 aaKnown RBP11.91□□□□□ -0.5
LSM1-205ENST00000523511 PMS2P11Q13670 270 aa11.91□□□□□ -0.5
LSM1-205ENST00000523511 FOXI2Q6ZQN5 318 aa11.91□□□□□ -0.5
LSM1-205ENST00000523511 STX12Q86Y82 276 aa11.91□□□□□ -0.5
LSM1-205ENST00000523511 C11orf45Q8TAV5 145 aa11.91□□□□□ -0.5
LSM1-205ENST00000523511 HLA-DRB4X5D2U9 266 aa11.91□□□□□ -0.5
LSM1-205ENST00000523511 CEMP1Q6PRD7 247 aaPredicted RBP11.9□□□□□ -0.5
LSM1-205ENST00000523511 Q6ZRG5 221 aa11.9□□□□□ -0.5
LSM1-205ENST00000523511 LRRC20Q8TCA0 184 aa11.9□□□□□ -0.5
LSM1-205ENST00000523511 SLC25A39Q9BZJ4 359 aaPredicted RBP11.9□□□□□ -0.5
LSM1-205ENST00000523511 ARL6Q9H0F7 186 aa11.9□□□□□ -0.5
LSM1-205ENST00000523511 DOK5Q9P104 306 aa11.9□□□□□ -0.5
LSM1-205ENST00000523511 ELOA3CA0A087WX78 387 aaPredicted RBP11.89□□□□□ -0.51
LSM1-205ENST00000523511 SLC38A11Q08AI6 406 aa11.89□□□□□ -0.51
LSM1-205ENST00000523511 ATP6V1FQ16864 119 aa11.89□□□□□ -0.51
LSM1-205ENST00000523511 TMEM182Q6ZP80 229 aaPredicted RBP11.89□□□□□ -0.51
LSM1-205ENST00000523511 CLUHP3Q96NS8 147 aa11.89□□□□□ -0.51
LSM1-205ENST00000523511 SHANK2-AS3Q9BTD1 123 aa11.89□□□□□ -0.51
LSM1-205ENST00000523511 SLC25A32Q9H2D1 315 aa11.89□□□□□ -0.51
LSM1-205ENST00000523511 SAV1Q9H4B6 383 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms